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The map label for this gene is 239617068

Identifier: 239617068

GI number: 239617068

Start: 712366

End: 712863

Strand: Reverse

Name: 239617068

Synonym: Kole_0670

Alternate gene names: NA

Gene position: 712863-712366 (Counterclockwise)

Preceding gene: 239617069

Following gene: 239617067

Centisome position: 30.97

GC content: 37.95

Gene sequence:

>498_bases
TTGATAGACGTAAACGGTTATCTTATACTTTCATATTCAAACTGCCATCGCGAAGCATGGCTTGTAGCTCACAGAATTTT
CCCTGAAAATGATAATACTAATCTTGCCCTTGGAAGACTTCTTCACGAAACTTCGTACGAAAACAAAGGGGAAAAGGATG
TTGCCATAGATAACATAAAACTGGATCTTGTTCAAGAAAAAAATGGCAAAACAATTGTAAGCGAGATTAAGAAATCGAAG
TATTCCCTTGATGGAGCTCGCGATCAATTGCTCTTTTATTTAAGAAGGCTCAAAGAAATGGGAGTTGAAGCTGAAGGTTT
GCTTCTTGTTCCAAAGGAAAGAAAACGGATACCTGTTATTCTTACCGCGGAAGAAGAAAAACGTATCCGAGAAATGAGCG
ACGAGATCCAAAAATTGGTTGATGGTCCAATTCCTCCAATAGAAAGATCACAAAATCGTTGTAAGAATTGCGCTTATTAC
ACTTATTGTTGGGTGTGA

Upstream 100 bases:

>100_bases
CTGTTGTTAATGGTTTCCACTATGTTTCTAACGACGAAAGGGAACTTCAAAGATACTATGACAGCGTAACTGGTTTTCAT
TCTGCAGGAAGTGATATTTA

Downstream 100 bases:

>100_bases
TGTATGTATGAAGAGAGTGTTATATCTATTCACTTCGGGGAAATTACTGAGAATGAATAATACGCTTGTTTTTGAAAAAG
AAGATGGGAAGAAGGTTCAT

Product: CRISPR-associated protein Cas4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MIDVNGYLILSYSNCHREAWLVAHRIFPENDNTNLALGRLLHETSYENKGEKDVAIDNIKLDLVQEKNGKTIVSEIKKSK
YSLDGARDQLLFYLRRLKEMGVEAEGLLLVPKERKRIPVILTAEEEKRIREMSDEIQKLVDGPIPPIERSQNRCKNCAYY
TYCWV

Sequences:

>Translated_165_residues
MIDVNGYLILSYSNCHREAWLVAHRIFPENDNTNLALGRLLHETSYENKGEKDVAIDNIKLDLVQEKNGKTIVSEIKKSK
YSLDGARDQLLFYLRRLKEMGVEAEGLLLVPKERKRIPVILTAEEEKRIREMSDEIQKLVDGPIPPIERSQNRCKNCAYY
TYCWV
>Mature_165_residues
MIDVNGYLILSYSNCHREAWLVAHRIFPENDNTNLALGRLLHETSYENKGEKDVAIDNIKLDLVQEKNGKTIVSEIKKSK
YSLDGARDQLLFYLRRLKEMGVEAEGLLLVPKERKRIPVILTAEEEKRIREMSDEIQKLVDGPIPPIERSQNRCKNCAYY
TYCWV

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013343
- InterPro:   IPR022765 [H]

Pfam domain/function: PF01930 DUF83 [H]

EC number: NA

Molecular weight: Translated: 19183; Mature: 19183

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDVNGYLILSYSNCHREAWLVAHRIFPENDNTNLALGRLLHETSYENKGEKDVAIDNIK
CCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEE
LDLVQEKNGKTIVSEIKKSKYSLDGARDQLLFYLRRLKEMGVEAEGLLLVPKERKRIPVI
EEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEE
LTAEEEKRIREMSDEIQKLVDGPIPPIERSQNRCKNCAYYTYCWV
EECHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEEEEEEC
>Mature Secondary Structure
MIDVNGYLILSYSNCHREAWLVAHRIFPENDNTNLALGRLLHETSYENKGEKDVAIDNIK
CCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEE
LDLVQEKNGKTIVSEIKKSKYSLDGARDQLLFYLRRLKEMGVEAEGLLLVPKERKRIPVI
EEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEE
LTAEEEKRIREMSDEIQKLVDGPIPPIERSQNRCKNCAYYTYCWV
EECHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]