| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616918
Identifier: 239616918
GI number: 239616918
Start: 564347
End: 565486
Strand: Reverse
Name: 239616918
Synonym: Kole_0514
Alternate gene names: NA
Gene position: 565486-564347 (Counterclockwise)
Preceding gene: 239616924
Following gene: 239616917
Centisome position: 24.56
GC content: 45.79
Gene sequence:
>1140_bases ATGGAAAACGTGAAGAAGAAGAAGATCATCGAACCCATTCTGCTTCTCCTTTTTCTTTCCCTTTTTCTATTTCTTTTTGG TTCACGTATGGGATTGGGTAACATGTTTAAAACCATCATGTACACCGCTCACGACTTGTTGTTGAATACAGTGTTCTTTA TCATGGCGGTTGCCGTACTTACGGGAGCTCTGGGTGGACTGCTTTCGGAATTCGGTGTTGTGGAAATGCTGAATAAGTTA CTCTCGCCTCTCATGAAACCCCTGTACAACCTGCCGGGGGCTGCTGCTATCGGTATAGTAACCACATATCTTTCAGATAA CCCGGCGATCCTTTCATTGGTGAAAGACAGGAATTTCATAAGGTGTTTTAAGCAGTATCAACTACCTCTTATGTGTAATC TTGGAACCTCCTTTGGAATGGGGCTAATGCTCACAACCTTTATGATTGCCCAGTCAGCTATTGCCGGTTACAGTCTTCTT GTTCCAGCGCTTGTGGGAAATGTTGCGGCTATTCTTGGAAGCGTGGTTTCTGTGAGGATCATGGCTTTCTATACGAAGAA AGCCTTCAGACATTCAGCAGCATTTGGAGACATAGAGTTGACAGACAGCACACTTTCACACACTGATAAGGGACTTTTTG AAAGATTTATGGATGCTGTGCTTGAAGGTGGAAAAAGTGGCGTTGAGCTGGGTGTTTCGATAATTCCCGGTGTGTTAATA ATCTCCACCTTTATAATGATGCTCACCTACGGACCTGCTTCTCCTGAAGGATATTCAGGCGTTGCATATGAGGGAATTGC TGTATTGCCATGGCTGGGGGAGAGACTCTTCTGGGTTTTGAAGTTTCTATTTGGTTTTTCCTCCCCGGAACTCATTGCCT TCCCGCTCACTTCGCTGGGTTCAACAGGAGCGGCTCTTGCCCTGGTGCCAAAATTCATAGCTGATGGGGTACTCATGCCC AATGACGTTGCAGTATTAACGGCTATCGGTATGTGCTGGAGCGGATACCTTTCAACACACGTTGCGATGATGGATTCTCT GGGATCGAGGCAACTGGTCGGTAAAGCAATCTTCAGCCACACGATAGGTGGTATCAGCGCAGGGGTCTTTGCCCATTTTG TATATGTGTTGATATCGTAA
Upstream 100 bases:
>100_bases CTTCTTCTGAGATGCAAGAACACCGCGACGTAGCCTCATCACTTATCCTTCTTTTCATGCTAAACTTTACCTGGACAATA TCTCCAGAAAGGTGGATTGG
Downstream 100 bases:
>100_bases TCCCGAGCAACTTAGTAGCGTTGTTACGAGAAAATTCTCATAAAGGAATGTCTCCTTATGGTGGAAGGTATTTCCCACAC TATATTGGTTGGAGACATTT
Product: nucleoside recognition domain protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MENVKKKKIIEPILLLLFLSLFLFLFGSRMGLGNMFKTIMYTAHDLLLNTVFFIMAVAVLTGALGGLLSEFGVVEMLNKL LSPLMKPLYNLPGAAAIGIVTTYLSDNPAILSLVKDRNFIRCFKQYQLPLMCNLGTSFGMGLMLTTFMIAQSAIAGYSLL VPALVGNVAAILGSVVSVRIMAFYTKKAFRHSAAFGDIELTDSTLSHTDKGLFERFMDAVLEGGKSGVELGVSIIPGVLI ISTFIMMLTYGPASPEGYSGVAYEGIAVLPWLGERLFWVLKFLFGFSSPELIAFPLTSLGSTGAALALVPKFIADGVLMP NDVAVLTAIGMCWSGYLSTHVAMMDSLGSRQLVGKAIFSHTIGGISAGVFAHFVYVLIS
Sequences:
>Translated_379_residues MENVKKKKIIEPILLLLFLSLFLFLFGSRMGLGNMFKTIMYTAHDLLLNTVFFIMAVAVLTGALGGLLSEFGVVEMLNKL LSPLMKPLYNLPGAAAIGIVTTYLSDNPAILSLVKDRNFIRCFKQYQLPLMCNLGTSFGMGLMLTTFMIAQSAIAGYSLL VPALVGNVAAILGSVVSVRIMAFYTKKAFRHSAAFGDIELTDSTLSHTDKGLFERFMDAVLEGGKSGVELGVSIIPGVLI ISTFIMMLTYGPASPEGYSGVAYEGIAVLPWLGERLFWVLKFLFGFSSPELIAFPLTSLGSTGAALALVPKFIADGVLMP NDVAVLTAIGMCWSGYLSTHVAMMDSLGSRQLVGKAIFSHTIGGISAGVFAHFVYVLIS >Mature_379_residues MENVKKKKIIEPILLLLFLSLFLFLFGSRMGLGNMFKTIMYTAHDLLLNTVFFIMAVAVLTGALGGLLSEFGVVEMLNKL LSPLMKPLYNLPGAAAIGIVTTYLSDNPAILSLVKDRNFIRCFKQYQLPLMCNLGTSFGMGLMLTTFMIAQSAIAGYSLL VPALVGNVAAILGSVVSVRIMAFYTKKAFRHSAAFGDIELTDSTLSHTDKGLFERFMDAVLEGGKSGVELGVSIIPGVLI ISTFIMMLTYGPASPEGYSGVAYEGIAVLPWLGERLFWVLKFLFGFSSPELIAFPLTSLGSTGAALALVPKFIADGVLMP NDVAVLTAIGMCWSGYLSTHVAMMDSLGSRQLVGKAIFSHTIGGISAGVFAHFVYVLIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40709; Mature: 40709
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENVKKKKIIEPILLLLFLSLFLFLFGSRMGLGNMFKTIMYTAHDLLLNTVFFIMAVAVL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGALGGLLSEFGVVEMLNKLLSPLMKPLYNLPGAAAIGIVTTYLSDNPAILSLVKDRNFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHH RCFKQYQLPLMCNLGTSFGMGLMLTTFMIAQSAIAGYSLLVPALVGNVAAILGSVVSVRI HHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAFYTKKAFRHSAAFGDIELTDSTLSHTDKGLFERFMDAVLEGGKSGVELGVSIIPGVLI HHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ISTFIMMLTYGPASPEGYSGVAYEGIAVLPWLGERLFWVLKFLFGFSSPELIAFPLTSLG HHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCC STGAALALVPKFIADGVLMPNDVAVLTAIGMCWSGYLSTHVAMMDSLGSRQLVGKAIFSH CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH TIGGISAGVFAHFVYVLIS HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MENVKKKKIIEPILLLLFLSLFLFLFGSRMGLGNMFKTIMYTAHDLLLNTVFFIMAVAVL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGALGGLLSEFGVVEMLNKLLSPLMKPLYNLPGAAAIGIVTTYLSDNPAILSLVKDRNFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHH RCFKQYQLPLMCNLGTSFGMGLMLTTFMIAQSAIAGYSLLVPALVGNVAAILGSVVSVRI HHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAFYTKKAFRHSAAFGDIELTDSTLSHTDKGLFERFMDAVLEGGKSGVELGVSIIPGVLI HHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH ISTFIMMLTYGPASPEGYSGVAYEGIAVLPWLGERLFWVLKFLFGFSSPELIAFPLTSLG HHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCC STGAALALVPKFIADGVLMPNDVAVLTAIGMCWSGYLSTHVAMMDSLGSRQLVGKAIFSH CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH TIGGISAGVFAHFVYVLIS HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA