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The map label for this gene is ygeA [H]

Identifier: 239616913

GI number: 239616913

Start: 554966

End: 555658

Strand: Reverse

Name: ygeA [H]

Synonym: Kole_0509

Alternate gene names: 239616913

Gene position: 555658-554966 (Counterclockwise)

Preceding gene: 239616914

Following gene: 239616908

Centisome position: 24.14

GC content: 43.43

Gene sequence:

>693_bases
ATGGCTAAACACATTGGAATAGTTGCATGCAGTGCTGAGGGAGCAGCTCTTTGTTACCGCACAATCTGCATAGAAGGTGA
AAACTTAATAGGAAGAAAATACGCTCACCCCGAGATTACTATGCATACCTTCTCTTTTGAGGAGTATATGCAATACATTG
AAGCAGGTGACTGGCAAAGAGTGGCTGATTTGATGGTGGCTTCAGCACATAAAGTGGCCAAAACCGGGGCTGATTTTGCT
ATATGTCCTGACAATACAATTCATCATGCATTTGATCTTGTTGTCGAGAAATCTCCGATTCCATGGCTTCATATTGCTGA
AGAAGTTGCTGCTGAAGCAAAACGAAAGAACTATAAATGCCTTGGAATTTTGGGCACACGCTTTTTGATGGAGTCTCCCG
TTTATCCTGCAAAACTTGATGCTGCGGGTATTGGGTACAGAATCCCTGAGACAAAAAATAGGGAACGAATCAATGAAATT
ATTTTCAACGAGCTTGTTTATGGTCGCTTTTATCCTGAATCTCGAGCGTACTTTAACGAAGTAATCGGTAAATTGAAGGA
CCAGGGTTGCGATGCCGTTGTGCTTGGCTGTACAGAGATACCTTTGCTGGTGATACCGGAAGAATCTCCCCTACCAACTC
TGGATTCCACAAGAATCCTGGCAAGAGCTGCCCTGAAAAAAGCACTGGAGTAG

Upstream 100 bases:

>100_bases
GTTACCGGTTCTCTGTATACTGTAGGAGAGGCGAGAAAGTTTTTATTATGATGAGTATGCTTTATTGGTGCTTCACCAAT
TAACCTTTAGGGGTGGAAGT

Downstream 100 bases:

>100_bases
TAATAGAAAGCAGATCTGAAAAAAATCATCGTTTTGGATGCTTCTTGAAAAACTCCCAGATCATCTCTGTGGCATTTATT
TCATCATATCTTCCGCCGAA

Product: aspartate racemase

Products: D-aspartate

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MAKHIGIVACSAEGAALCYRTICIEGENLIGRKYAHPEITMHTFSFEEYMQYIEAGDWQRVADLMVASAHKVAKTGADFA
ICPDNTIHHAFDLVVEKSPIPWLHIAEEVAAEAKRKNYKCLGILGTRFLMESPVYPAKLDAAGIGYRIPETKNRERINEI
IFNELVYGRFYPESRAYFNEVIGKLKDQGCDAVVLGCTEIPLLVIPEESPLPTLDSTRILARAALKKALE

Sequences:

>Translated_230_residues
MAKHIGIVACSAEGAALCYRTICIEGENLIGRKYAHPEITMHTFSFEEYMQYIEAGDWQRVADLMVASAHKVAKTGADFA
ICPDNTIHHAFDLVVEKSPIPWLHIAEEVAAEAKRKNYKCLGILGTRFLMESPVYPAKLDAAGIGYRIPETKNRERINEI
IFNELVYGRFYPESRAYFNEVIGKLKDQGCDAVVLGCTEIPLLVIPEESPLPTLDSTRILARAALKKALE
>Mature_229_residues
AKHIGIVACSAEGAALCYRTICIEGENLIGRKYAHPEITMHTFSFEEYMQYIEAGDWQRVADLMVASAHKVAKTGADFAI
CPDNTIHHAFDLVVEKSPIPWLHIAEEVAAEAKRKNYKCLGILGTRFLMESPVYPAKLDAAGIGYRIPETKNRERINEII
FNELVYGRFYPESRAYFNEVIGKLKDQGCDAVVLGCTEIPLLVIPEESPLPTLDSTRILARAALKKALE

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=189, Percent_Identity=34.9206349206349, Blast_Score=127, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: 5.1.1.13

Molecular weight: Translated: 25672; Mature: 25541

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKHIGIVACSAEGAALCYRTICIEGENLIGRKYAHPEITMHTFSFEEYMQYIEAGDWQR
CCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCHHH
VADLMVASAHKVAKTGADFAICPDNTIHHAFDLVVEKSPIPWLHIAEEVAAEAKRKNYKC
HHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCEE
LGILGTRFLMESPVYPAKLDAAGIGYRIPETKNRERINEIIFNELVYGRFYPESRAYFNE
EEEHHHHHHHHCCCCCCEECCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
VIGKLKDQGCDAVVLGCTEIPLLVIPEESPLPTLDSTRILARAALKKALE
HHHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKHIGIVACSAEGAALCYRTICIEGENLIGRKYAHPEITMHTFSFEEYMQYIEAGDWQR
CCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCHHH
VADLMVASAHKVAKTGADFAICPDNTIHHAFDLVVEKSPIPWLHIAEEVAAEAKRKNYKC
HHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCEE
LGILGTRFLMESPVYPAKLDAAGIGYRIPETKNRERINEIIFNELVYGRFYPESRAYFNE
EEEHHHHHHHHCCCCCCEECCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
VIGKLKDQGCDAVVLGCTEIPLLVIPEESPLPTLDSTRILARAALKKALE
HHHHHHHCCCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate

Specific reaction: L-aspartate = D-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]