Definition Kosmotoga olearia TBF 19.5.1, complete genome.
Accession NC_012785
Length 2,302,126

Click here to switch to the map view.

The map label for this gene is 239616852

Identifier: 239616852

GI number: 239616852

Start: 476113

End: 476748

Strand: Reverse

Name: 239616852

Synonym: Kole_0447

Alternate gene names: NA

Gene position: 476748-476113 (Counterclockwise)

Preceding gene: 239616853

Following gene: 239616849

Centisome position: 20.71

GC content: 39.31

Gene sequence:

>636_bases
ATGCTGTTTGCCATCGTAATATTAGGTGCACTCGTGACTTTGCTGCTTTATATCTTGTTTCGTATAACACGTAAAACGGA
GTTTAAGAGCACCTCAATTGTTAGCAGGATAGAGAAAGTTCCTGAACTCAGCACGGCAAAATTGACAATAACACAGATTT
ACGAGATGGAAAAAAGAAGTTTCGTACCGGGTCTTTCGGGAAAATACACTCTCATCGTTCCGATAACGGTGCGTGGTTTT
CTTGACCTTTCCACGCTGAAGGAAGAAAACATTGAAGTATTGGAAACCAGCGATGCCAAGAGGGTAACACTCAGGCTTCC
ATTGCCCAACCTTGAAATTACGGTTACCTTAAGCCAGCTGAATGAAATAAAGGTGATAAACGAAAGCGGTATGCTGGTAA
AAATGTTTGGTCCTAAAGATAAATTGAGAATACTCAAAGAAAATACCAATGCCATTAGAGAAAAGGCTATAAAAGAGTCA
GAAAAAACAGGAATTATTGATATTGCAAAAGAAAGTGCCCGGAATTTCTTTCATGGGCTGTTGTTGGGAATGGGTTTTGA
CGAGGTAATCATATACTTCCAGGAAGATGTTCCACTTGAGAATAAAGTCAGTCCCTTGAAAATTGAAGAGAAATGA

Upstream 100 bases:

>100_bases
ATCTTGTAGATGATGGACTTGTGGATAAGCTTGTGGATAATCTGGAAGCTTAATTTCTATTCCGGGGCCTGGGCCCCGGT
TTCTATAAGGAGGCGATGGA

Downstream 100 bases:

>100_bases
GAATCTGACTGTTTGAAAAATATTGGGACCCGATACGTATGTATTTCACCTTTTGTATGTAAGTTTTCCTTCAAGGTGCT
CCTCAAAACGAGCCAAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLFAIVILGALVTLLLYILFRITRKTEFKSTSIVSRIEKVPELSTAKLTITQIYEMEKRSFVPGLSGKYTLIVPITVRGF
LDLSTLKEENIEVLETSDAKRVTLRLPLPNLEITVTLSQLNEIKVINESGMLVKMFGPKDKLRILKENTNAIREKAIKES
EKTGIIDIAKESARNFFHGLLLGMGFDEVIIYFQEDVPLENKVSPLKIEEK

Sequences:

>Translated_211_residues
MLFAIVILGALVTLLLYILFRITRKTEFKSTSIVSRIEKVPELSTAKLTITQIYEMEKRSFVPGLSGKYTLIVPITVRGF
LDLSTLKEENIEVLETSDAKRVTLRLPLPNLEITVTLSQLNEIKVINESGMLVKMFGPKDKLRILKENTNAIREKAIKES
EKTGIIDIAKESARNFFHGLLLGMGFDEVIIYFQEDVPLENKVSPLKIEEK
>Mature_211_residues
MLFAIVILGALVTLLLYILFRITRKTEFKSTSIVSRIEKVPELSTAKLTITQIYEMEKRSFVPGLSGKYTLIVPITVRGF
LDLSTLKEENIEVLETSDAKRVTLRLPLPNLEITVTLSQLNEIKVINESGMLVKMFGPKDKLRILKENTNAIREKAIKES
EKTGIIDIAKESARNFFHGLLLGMGFDEVIIYFQEDVPLENKVSPLKIEEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23927; Mature: 23927

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFAIVILGALVTLLLYILFRITRKTEFKSTSIVSRIEKVPELSTAKLTITQIYEMEKRS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
FVPGLSGKYTLIVPITVRGFLDLSTLKEENIEVLETSDAKRVTLRLPLPNLEITVTLSQL
CCCCCCCCEEEEEEEEEECEEEHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEEEECC
NEIKVINESGMLVKMFGPKDKLRILKENTNAIREKAIKESEKTGIIDIAKESARNFFHGL
CEEEEECCCCCEEEEECCCHHHHEEHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH
LLGMGFDEVIIYFQEDVPLENKVSPLKIEEK
HHHCCCCCEEEEEECCCCCCCCCCCEEECCC
>Mature Secondary Structure
MLFAIVILGALVTLLLYILFRITRKTEFKSTSIVSRIEKVPELSTAKLTITQIYEMEKRS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH
FVPGLSGKYTLIVPITVRGFLDLSTLKEENIEVLETSDAKRVTLRLPLPNLEITVTLSQL
CCCCCCCCEEEEEEEEEECEEEHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEEEECC
NEIKVINESGMLVKMFGPKDKLRILKENTNAIREKAIKESEKTGIIDIAKESARNFFHGL
CEEEEECCCCCEEEEECCCHHHHEEHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH
LLGMGFDEVIIYFQEDVPLENKVSPLKIEEK
HHHCCCCCEEEEEECCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA