| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616852
Identifier: 239616852
GI number: 239616852
Start: 476113
End: 476748
Strand: Reverse
Name: 239616852
Synonym: Kole_0447
Alternate gene names: NA
Gene position: 476748-476113 (Counterclockwise)
Preceding gene: 239616853
Following gene: 239616849
Centisome position: 20.71
GC content: 39.31
Gene sequence:
>636_bases ATGCTGTTTGCCATCGTAATATTAGGTGCACTCGTGACTTTGCTGCTTTATATCTTGTTTCGTATAACACGTAAAACGGA GTTTAAGAGCACCTCAATTGTTAGCAGGATAGAGAAAGTTCCTGAACTCAGCACGGCAAAATTGACAATAACACAGATTT ACGAGATGGAAAAAAGAAGTTTCGTACCGGGTCTTTCGGGAAAATACACTCTCATCGTTCCGATAACGGTGCGTGGTTTT CTTGACCTTTCCACGCTGAAGGAAGAAAACATTGAAGTATTGGAAACCAGCGATGCCAAGAGGGTAACACTCAGGCTTCC ATTGCCCAACCTTGAAATTACGGTTACCTTAAGCCAGCTGAATGAAATAAAGGTGATAAACGAAAGCGGTATGCTGGTAA AAATGTTTGGTCCTAAAGATAAATTGAGAATACTCAAAGAAAATACCAATGCCATTAGAGAAAAGGCTATAAAAGAGTCA GAAAAAACAGGAATTATTGATATTGCAAAAGAAAGTGCCCGGAATTTCTTTCATGGGCTGTTGTTGGGAATGGGTTTTGA CGAGGTAATCATATACTTCCAGGAAGATGTTCCACTTGAGAATAAAGTCAGTCCCTTGAAAATTGAAGAGAAATGA
Upstream 100 bases:
>100_bases ATCTTGTAGATGATGGACTTGTGGATAAGCTTGTGGATAATCTGGAAGCTTAATTTCTATTCCGGGGCCTGGGCCCCGGT TTCTATAAGGAGGCGATGGA
Downstream 100 bases:
>100_bases GAATCTGACTGTTTGAAAAATATTGGGACCCGATACGTATGTATTTCACCTTTTGTATGTAAGTTTTCCTTCAAGGTGCT CCTCAAAACGAGCCAAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MLFAIVILGALVTLLLYILFRITRKTEFKSTSIVSRIEKVPELSTAKLTITQIYEMEKRSFVPGLSGKYTLIVPITVRGF LDLSTLKEENIEVLETSDAKRVTLRLPLPNLEITVTLSQLNEIKVINESGMLVKMFGPKDKLRILKENTNAIREKAIKES EKTGIIDIAKESARNFFHGLLLGMGFDEVIIYFQEDVPLENKVSPLKIEEK
Sequences:
>Translated_211_residues MLFAIVILGALVTLLLYILFRITRKTEFKSTSIVSRIEKVPELSTAKLTITQIYEMEKRSFVPGLSGKYTLIVPITVRGF LDLSTLKEENIEVLETSDAKRVTLRLPLPNLEITVTLSQLNEIKVINESGMLVKMFGPKDKLRILKENTNAIREKAIKES EKTGIIDIAKESARNFFHGLLLGMGFDEVIIYFQEDVPLENKVSPLKIEEK >Mature_211_residues MLFAIVILGALVTLLLYILFRITRKTEFKSTSIVSRIEKVPELSTAKLTITQIYEMEKRSFVPGLSGKYTLIVPITVRGF LDLSTLKEENIEVLETSDAKRVTLRLPLPNLEITVTLSQLNEIKVINESGMLVKMFGPKDKLRILKENTNAIREKAIKES EKTGIIDIAKESARNFFHGLLLGMGFDEVIIYFQEDVPLENKVSPLKIEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23927; Mature: 23927
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFAIVILGALVTLLLYILFRITRKTEFKSTSIVSRIEKVPELSTAKLTITQIYEMEKRS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH FVPGLSGKYTLIVPITVRGFLDLSTLKEENIEVLETSDAKRVTLRLPLPNLEITVTLSQL CCCCCCCCEEEEEEEEEECEEEHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEEEECC NEIKVINESGMLVKMFGPKDKLRILKENTNAIREKAIKESEKTGIIDIAKESARNFFHGL CEEEEECCCCCEEEEECCCHHHHEEHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH LLGMGFDEVIIYFQEDVPLENKVSPLKIEEK HHHCCCCCEEEEEECCCCCCCCCCCEEECCC >Mature Secondary Structure MLFAIVILGALVTLLLYILFRITRKTEFKSTSIVSRIEKVPELSTAKLTITQIYEMEKRS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHH FVPGLSGKYTLIVPITVRGFLDLSTLKEENIEVLETSDAKRVTLRLPLPNLEITVTLSQL CCCCCCCCEEEEEEEEEECEEEHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEEEECC NEIKVINESGMLVKMFGPKDKLRILKENTNAIREKAIKESEKTGIIDIAKESARNFFHGL CEEEEECCCCCEEEEECCCHHHHEEHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH LLGMGFDEVIIYFQEDVPLENKVSPLKIEEK HHHCCCCCEEEEEECCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA