| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is ylaK [H]
Identifier: 239616642
GI number: 239616642
Start: 263054
End: 264343
Strand: Direct
Name: ylaK [H]
Synonym: Kole_0235
Alternate gene names: 239616642
Gene position: 263054-264343 (Clockwise)
Preceding gene: 239616641
Following gene: 239616643
Centisome position: 11.43
GC content: 43.18
Gene sequence:
>1290_bases ATGGTCAAGAACTTCATTCTCGATACGAACGTTCTGGTACATGATCCATATTGTATTGAAAAATTCGAGGATAACAACGT GATTATTCCGTTTCCTGTTCTTGAAGAGATAGACAAGTTGAAAAGTAAACCCGGAACCCTTGGCCAGAGTGCAAGAAAGG TCAACAGGATATTGGATTCTTACAGAGAAAAGGGAAGCCTTACCGGTGGAATTACACTTCCATCTGGAGGCAAGTTGAAG GTTCTGGTTTTCAATGAGTTTCACGTGGAATTGCCACCTTTTTTGGAACATAATTACAAGGACAACGCCATACTTCTTTA CACTCTGGAATTGAAAAAGAGAAACAAGGTACCTGTCGTGCTCGTGAGTAAGGATATAAATCTCAGGGTTAAGGCCGATG TGGTGGGAATACCAGCACAGGATTATCTTGCGGATAAGGTTAGCCTGGACGAAGGGTTATCTGGAATATTGAAGATAAAC GATGATATCTTGCGCAAACGTTTCCTGGAAACAGGAGAACTGCCGGCTAAAGAGTTAGCAGACGATGAGATATATCCAAA TCTTTTCATAGATTTTGGCGAAGACGTTTTTGGACGTGTTGCGCCCGATGGTAAGAAAATCGTCAAACTAAAAGTCAACA TGGAAACTTCATGCTGGGGGATTCAGCCGCGCAATGTTGAACAGATGCTGGTAATGGAACTTCTTCTTGATGATAGAATA AAACTGGTAACAATTCCAGGTATGGCCGGAACCGGTAAAACACTTTTGTCATTAGCAGCGGGGCTCAGGAAGGTGCTTGA CGAAAAGGTTTATGACCGGCTTCTGGTCGCGCGACCTTTGATTCCTATGGGAAAAGATATAGGATATCTTCCCGGTTCAA GGGAAGATAAGGTTCGCCCGTGGATGCAGCCAATTTATGATAACCTTTTCCTGTTGTTCACAAATCGTCATCAGGACCTT GATACATTTCTTAAACGAGGCGAGAAATTAGAAATTGAGATTCTCAGTTATATTCGCGGACGTTCTATCCCGAATCAGTT AATGATTATCGACGAAGCTCAAAACCTCACTCCGCACGAGGTAAAAACTATAATCACCAGAGTTGGCGAGGATACGAAAA TCATTCTGACGGGTGATCCTTATCAAATCGATAATATTTATCTCGATACAAGCAGTTGTGGGCTGGTTTATGCGGCGTCC AGATTCAAGAAACATCCACTGGCTGGATGCGTTACCTTAACAAAAGGTGAGAGATCCGTCCTTGCCAGCGCAGCGGCAGA ACTGCTGTAA
Upstream 100 bases:
>100_bases ATGATGCGAGGGTTACTGGAAAGGTTTTTCTGGCAATGGTGAAAAAGCTCGGTGGGTTTTCAAGCATTCGCAAATATGTG AAGCGCTGGAGGGGATAGGT
Downstream 100 bases:
>100_bases GATAATGGAGAGGTGAAACATGACGAACACACAGGAATATGATCTCTATTTAAAGATAGCCAAACCGGATATTCATGTTC TCTGTTATATAGTGGAAGCT
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MVKNFILDTNVLVHDPYCIEKFEDNNVIIPFPVLEEIDKLKSKPGTLGQSARKVNRILDSYREKGSLTGGITLPSGGKLK VLVFNEFHVELPPFLEHNYKDNAILLYTLELKKRNKVPVVLVSKDINLRVKADVVGIPAQDYLADKVSLDEGLSGILKIN DDILRKRFLETGELPAKELADDEIYPNLFIDFGEDVFGRVAPDGKKIVKLKVNMETSCWGIQPRNVEQMLVMELLLDDRI KLVTIPGMAGTGKTLLSLAAGLRKVLDEKVYDRLLVARPLIPMGKDIGYLPGSREDKVRPWMQPIYDNLFLLFTNRHQDL DTFLKRGEKLEIEILSYIRGRSIPNQLMIIDEAQNLTPHEVKTIITRVGEDTKIILTGDPYQIDNIYLDTSSCGLVYAAS RFKKHPLAGCVTLTKGERSVLASAAAELL
Sequences:
>Translated_429_residues MVKNFILDTNVLVHDPYCIEKFEDNNVIIPFPVLEEIDKLKSKPGTLGQSARKVNRILDSYREKGSLTGGITLPSGGKLK VLVFNEFHVELPPFLEHNYKDNAILLYTLELKKRNKVPVVLVSKDINLRVKADVVGIPAQDYLADKVSLDEGLSGILKIN DDILRKRFLETGELPAKELADDEIYPNLFIDFGEDVFGRVAPDGKKIVKLKVNMETSCWGIQPRNVEQMLVMELLLDDRI KLVTIPGMAGTGKTLLSLAAGLRKVLDEKVYDRLLVARPLIPMGKDIGYLPGSREDKVRPWMQPIYDNLFLLFTNRHQDL DTFLKRGEKLEIEILSYIRGRSIPNQLMIIDEAQNLTPHEVKTIITRVGEDTKIILTGDPYQIDNIYLDTSSCGLVYAAS RFKKHPLAGCVTLTKGERSVLASAAAELL >Mature_429_residues MVKNFILDTNVLVHDPYCIEKFEDNNVIIPFPVLEEIDKLKSKPGTLGQSARKVNRILDSYREKGSLTGGITLPSGGKLK VLVFNEFHVELPPFLEHNYKDNAILLYTLELKKRNKVPVVLVSKDINLRVKADVVGIPAQDYLADKVSLDEGLSGILKIN DDILRKRFLETGELPAKELADDEIYPNLFIDFGEDVFGRVAPDGKKIVKLKVNMETSCWGIQPRNVEQMLVMELLLDDRI KLVTIPGMAGTGKTLLSLAAGLRKVLDEKVYDRLLVARPLIPMGKDIGYLPGSREDKVRPWMQPIYDNLFLLFTNRHQDL DTFLKRGEKLEIEILSYIRGRSIPNQLMIIDEAQNLTPHEVKTIITRVGEDTKIILTGDPYQIDNIYLDTSSCGLVYAAS RFKKHPLAGCVTLTKGERSVLASAAAELL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=198, Percent_Identity=33.8383838383838, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI145693103, Length=173, Percent_Identity=35.2601156069364, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 48222; Mature: 48222
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKNFILDTNVLVHDPYCIEKFEDNNVIIPFPVLEEIDKLKSKPGTLGQSARKVNRILDS CCCCEEEECCEEEECCCEEEEECCCCEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH YREKGSLTGGITLPSGGKLKVLVFNEFHVELPPFLEHNYKDNAILLYTLELKKRNKVPVV HHHCCCCCCCEECCCCCEEEEEEEEEEEECCCHHHCCCCCCCEEEEEEEEECCCCCCCEE LVSKDINLRVKADVVGIPAQDYLADKVSLDEGLSGILKINDDILRKRFLETGELPAKELA EEECCCCEEEEEEEEECCCHHHHHHHHCHHHCCCEEEEECHHHHHHHHHHCCCCCHHHCC DDEIYPNLFIDFGEDVFGRVAPDGKKIVKLKVNMETSCWGIQPRNVEQMLVMELLLDDRI CCCCCCCEEEECCCHHHCCCCCCCCEEEEEEEECCCCEECCCCCCHHHHHHHHHHHCCCE KLVTIPGMAGTGKTLLSLAAGLRKVLDEKVYDRLLVARPLIPMGKDIGYLPGSREDKVRP EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH WMQPIYDNLFLLFTNRHQDLDTFLKRGEKLEIEILSYIRGRSIPNQLMIIDEAQNLTPHE HHHHHHCCEEEEEECCCCCHHHHHHCCCEEEEHHHHHHHCCCCCCEEEEEECCCCCCHHH VKTIITRVGEDTKIILTGDPYQIDNIYLDTSSCGLVYAASRFKKHPLAGCVTLTKGERSV HHHHHHHCCCCCEEEEECCCEEEEEEEEECCCCCEEEEHHHHCCCCCCEEEEEECCCHHH LASAAAELL HHHHHHHCC >Mature Secondary Structure MVKNFILDTNVLVHDPYCIEKFEDNNVIIPFPVLEEIDKLKSKPGTLGQSARKVNRILDS CCCCEEEECCEEEECCCEEEEECCCCEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHH YREKGSLTGGITLPSGGKLKVLVFNEFHVELPPFLEHNYKDNAILLYTLELKKRNKVPVV HHHCCCCCCCEECCCCCEEEEEEEEEEEECCCHHHCCCCCCCEEEEEEEEECCCCCCCEE LVSKDINLRVKADVVGIPAQDYLADKVSLDEGLSGILKINDDILRKRFLETGELPAKELA EEECCCCEEEEEEEEECCCHHHHHHHHCHHHCCCEEEEECHHHHHHHHHHCCCCCHHHCC DDEIYPNLFIDFGEDVFGRVAPDGKKIVKLKVNMETSCWGIQPRNVEQMLVMELLLDDRI CCCCCCCEEEECCCHHHCCCCCCCCEEEEEEEECCCCEECCCCCCHHHHHHHHHHHCCCE KLVTIPGMAGTGKTLLSLAAGLRKVLDEKVYDRLLVARPLIPMGKDIGYLPGSREDKVRP EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH WMQPIYDNLFLLFTNRHQDLDTFLKRGEKLEIEILSYIRGRSIPNQLMIIDEAQNLTPHE HHHHHHCCEEEEEECCCCCHHHHHHCCCEEEEHHHHHHHCCCCCCEEEEEECCCCCCHHH VKTIITRVGEDTKIILTGDPYQIDNIYLDTSSCGLVYAASRFKKHPLAGCVTLTKGERSV HHHHHHHCCCCCEEEEECCCEEEEEEEEECCCCCEEEEHHHHCCCCCCEEEEEECCCHHH LASAAAELL HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]