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The map label for this gene is dsbD [C]

Identifier: 239616603

GI number: 239616603

Start: 221282

End: 222016

Strand: Direct

Name: dsbD [C]

Synonym: Kole_0196

Alternate gene names: 239616603

Gene position: 221282-222016 (Clockwise)

Preceding gene: 239616595

Following gene: 239616604

Centisome position: 9.61

GC content: 47.35

Gene sequence:

>735_bases
ATGAACGAATTTACTCTGGCTGCAACGGCATCAAACCTCTTGCAAAGCCCGGGAGGTATTTCACCACTCATAAGTGTGAG
CGTCAGCTATAGCAGCGCGATTCTCGGTGGGCTGCTTTCCTTTTTCTCGCCGTGTGTTTTGCCGCTGATCCCCATTTTCT
TCGGGGTTCTGATGGCAGGTGCAGAAAGCGCAAAAGTGCGGTTTTTTAGAGGTTTGTCGTTCACCATTGGAATGTCTCTC
TTTTTCTTCCTGTTGGGTACAGGTGCCGGAGGCCTGGGACAATTCATAAGAAGAAACGAAACGCTGATGAACATCCTCTC
TGGCTCGCTGTTCATCGCCTTTGCTTTTATGTACTTATTTGAGGTAGGATTTAAGGGAGTGAGGGTAAACGCGTGGAAAT
TCAGCGGCAGTGTCTTTAGCGGTTTTCTTTTAGGTTCAGTTCTCGGCCTGATCTGGGTTCCATGTGCTGGCCCGATACTC
GGCTCAATCCTGGTACTTGCTGCCAATCAGGGAACAGCTGCTAAAGGCGGAATGCTTCTTCTCACTTACTCTCTTGGTTT
GAGCATACCTTTTCTGACCCTGAGCGGCGTTGTAGCAAAAATAACGTCCAGATTAAGTTTTGGAGGGGAATCGAAAGCCA
GAAGGATTGTGAGGATCATCGTTTTCATACTGCTATTCGGTGCAGGAATTTTGACTCTCTTTGGCAAATTGAATCTATTG
CAGTTTACAGCTTAG

Upstream 100 bases:

>100_bases
TCACACTTCCGCCGCGTAGCGGCACTCTCGGATCTCGGTTCTCAGATTCTCGGTTTTATGTAGTATAATAGATATAAACC
ATAATACCGGGGGTAGGTAT

Downstream 100 bases:

>100_bases
GAGGTAGGTAGAATGAAAAAGATAATGGTTCTATTTTCAGTGCTGGTTATTGCAACACTATCGCTGGCATACATCGGAAA
ACTCGATGATTTCAATGTTG

Product: cytochrome c biogenesis protein transmembrane region

Products: DsbDoxidized; DsbGreduced [C]

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MNEFTLAATASNLLQSPGGISPLISVSVSYSSAILGGLLSFFSPCVLPLIPIFFGVLMAGAESAKVRFFRGLSFTIGMSL
FFFLLGTGAGGLGQFIRRNETLMNILSGSLFIAFAFMYLFEVGFKGVRVNAWKFSGSVFSGFLLGSVLGLIWVPCAGPIL
GSILVLAANQGTAAKGGMLLLTYSLGLSIPFLTLSGVVAKITSRLSFGGESKARRIVRIIVFILLFGAGILTLFGKLNLL
QFTA

Sequences:

>Translated_244_residues
MNEFTLAATASNLLQSPGGISPLISVSVSYSSAILGGLLSFFSPCVLPLIPIFFGVLMAGAESAKVRFFRGLSFTIGMSL
FFFLLGTGAGGLGQFIRRNETLMNILSGSLFIAFAFMYLFEVGFKGVRVNAWKFSGSVFSGFLLGSVLGLIWVPCAGPIL
GSILVLAANQGTAAKGGMLLLTYSLGLSIPFLTLSGVVAKITSRLSFGGESKARRIVRIIVFILLFGAGILTLFGKLNLL
QFTA
>Mature_244_residues
MNEFTLAATASNLLQSPGGISPLISVSVSYSSAILGGLLSFFSPCVLPLIPIFFGVLMAGAESAKVRFFRGLSFTIGMSL
FFFLLGTGAGGLGQFIRRNETLMNILSGSLFIAFAFMYLFEVGFKGVRVNAWKFSGSVFSGFLLGSVLGLIWVPCAGPIL
GSILVLAANQGTAAKGGMLLLTYSLGLSIPFLTLSGVVAKITSRLSFGGESKARRIVRIIVFILLFGAGILTLFGKLNLL
QFTA

Specific function: Could be involved in cytochrome c synthesis [H]

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: 1.8.1.8 [C]

Molecular weight: Translated: 25736; Mature: 25736

Theoretical pI: Translated: 11.16; Mature: 11.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFTLAATASNLLQSPGGISPLISVSVSYSSAILGGLLSFFSPCVLPLIPIFFGVLMAG
CCCEEHHHHHHHHHCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AESAKVRFFRGLSFTIGMSLFFFLLGTGAGGLGQFIRRNETLMNILSGSLFIAFAFMYLF
CCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVGFKGVRVNAWKFSGSVFSGFLLGSVLGLIWVPCAGPILGSILVLAANQGTAAKGGMLL
HHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEE
LTYSLGLSIPFLTLSGVVAKITSRLSFGGESKARRIVRIIVFILLFGAGILTLFGKLNLL
EEEHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFTA
EECC
>Mature Secondary Structure
MNEFTLAATASNLLQSPGGISPLISVSVSYSSAILGGLLSFFSPCVLPLIPIFFGVLMAG
CCCEEHHHHHHHHHCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AESAKVRFFRGLSFTIGMSLFFFLLGTGAGGLGQFIRRNETLMNILSGSLFIAFAFMYLF
CCHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVGFKGVRVNAWKFSGSVFSGFLLGSVLGLIWVPCAGPILGSILVLAANQGTAAKGGMLL
HHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEE
LTYSLGLSIPFLTLSGVVAKITSRLSFGGESKARRIVRIIVFILLFGAGILTLFGKLNLL
EEEHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFTA
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DsbGoxidized; DsbDreduced/thiol:disulfide reductase [C]

Specific reaction: DsbDreduced/thiol:disulfide reductase + DsbCoxidized = DsbDoxidized + DsbCreduced DsbGoxidized + DsbDreduced/thiol:disulfide reductase = DsbGreduced + DsbDoxidized [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]