| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616593
Identifier: 239616593
GI number: 239616593
Start: 207193
End: 208014
Strand: Direct
Name: 239616593
Synonym: Kole_0185
Alternate gene names: NA
Gene position: 207193-208014 (Clockwise)
Preceding gene: 239616592
Following gene: 239616594
Centisome position: 9.0
GC content: 40.51
Gene sequence:
>822_bases ATGTCTGGAGAAAAAAAGTACGATTTACCTGTTTTTTTACTGATTTTATCCATAATTGTGGGACTTGCCGCAATTATATG GTATATGCCTACTAACCCAAGGATCCTTACCGGAAAACAAACCGAAAAGATCCGGCGTCTTTCGGTTTTGTATAATGCTG GTCTGAATTCGGATTGTGGGGCAATCCTATCCAATGAATCTTACGATTATGATGACAGCGTCCTCGAGGCATATCGCTAC TTCTTCGGAATAAACCGGAAACCAATCGTGATGCTAGCAGGAATTAAAACAGTCGATAACAAAGGAAAGAAAATATTTTC GTCCAATCCCGTCATAGAATCGTACGTCAACAAAAACATGAGAAAGGTTATGCCAGAGCTTCGCAAAAGGATAGAAAGAG CTGTTCTTTCTTTGAACAGTTTTTCAAAATCCGATACGACATTCAAAAAAAGAATAGCACAGGAGATATATCACGCGATT ATGGACTTCTCCAGCGCAAAGGTTGCGTTGACGATCAATAATGAAACCATAGATCTTGACCTTTCAAAAGTCGATCCATA TCTTGTGGCTTCCATAATGCTCGTAGAATCGATGATGAACCCATACGCAGTGGCTGAAGAGAGAAGCATTAAACAGGATT TCTCCGATACTATATACTCGCGAGGCTTGATGCAAATCTACGAAACAACCTTCTGGCAGCTCAAGAGCTGGATAAACAAT TCTGAACTCGATATGACCGTAGATGATCTGTGGTCAATAAGGAACAATATTTTTCTGGGAATGGTGTACTTGGCGTACGC CCAAACTTTGATCGAAAGGTAG
Upstream 100 bases:
>100_bases TCGAAAAGAAAAAGAAGAAAAGAAAATAATCTTTCCGTACAACTTTTTAACAAAAGAGGTCGGACTTCCCGGCCTCTTAT TTTGATATAATACGACAAGT
Downstream 100 bases:
>100_bases ATATTATGTTTGATTGGCATACTTCCAAAGTTGTTTATCAGATTTTCCCGGATAGATTCAATATAGGCGATGGAAAAACA GCCAAACAAAAGGAAAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSGEKKYDLPVFLLILSIIVGLAAIIWYMPTNPRILTGKQTEKIRRLSVLYNAGLNSDCGAILSNESYDYDDSVLEAYRY FFGINRKPIVMLAGIKTVDNKGKKIFSSNPVIESYVNKNMRKVMPELRKRIERAVLSLNSFSKSDTTFKKRIAQEIYHAI MDFSSAKVALTINNETIDLDLSKVDPYLVASIMLVESMMNPYAVAEERSIKQDFSDTIYSRGLMQIYETTFWQLKSWINN SELDMTVDDLWSIRNNIFLGMVYLAYAQTLIER
Sequences:
>Translated_273_residues MSGEKKYDLPVFLLILSIIVGLAAIIWYMPTNPRILTGKQTEKIRRLSVLYNAGLNSDCGAILSNESYDYDDSVLEAYRY FFGINRKPIVMLAGIKTVDNKGKKIFSSNPVIESYVNKNMRKVMPELRKRIERAVLSLNSFSKSDTTFKKRIAQEIYHAI MDFSSAKVALTINNETIDLDLSKVDPYLVASIMLVESMMNPYAVAEERSIKQDFSDTIYSRGLMQIYETTFWQLKSWINN SELDMTVDDLWSIRNNIFLGMVYLAYAQTLIER >Mature_272_residues SGEKKYDLPVFLLILSIIVGLAAIIWYMPTNPRILTGKQTEKIRRLSVLYNAGLNSDCGAILSNESYDYDDSVLEAYRYF FGINRKPIVMLAGIKTVDNKGKKIFSSNPVIESYVNKNMRKVMPELRKRIERAVLSLNSFSKSDTTFKKRIAQEIYHAIM DFSSAKVALTINNETIDLDLSKVDPYLVASIMLVESMMNPYAVAEERSIKQDFSDTIYSRGLMQIYETTFWQLKSWINNS ELDMTVDDLWSIRNNIFLGMVYLAYAQTLIER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31378; Mature: 31247
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGEKKYDLPVFLLILSIIVGLAAIIWYMPTNPRILTGKQTEKIRRLSVLYNAGLNSDCG CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCC AILSNESYDYDDSVLEAYRYFFGINRKPIVMLAGIKTVDNKGKKIFSSNPVIESYVNKNM HHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCEEECCCCHHHHHHCHHH RKVMPELRKRIERAVLSLNSFSKSDTTFKKRIAQEIYHAIMDFSSAKVALTINNETIDLD HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEE LSKVDPYLVASIMLVESMMNPYAVAEERSIKQDFSDTIYSRGLMQIYETTFWQLKSWINN HHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SELDMTVDDLWSIRNNIFLGMVYLAYAQTLIER CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGEKKYDLPVFLLILSIIVGLAAIIWYMPTNPRILTGKQTEKIRRLSVLYNAGLNSDCG CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCC AILSNESYDYDDSVLEAYRYFFGINRKPIVMLAGIKTVDNKGKKIFSSNPVIESYVNKNM HHCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCEEECCCCHHHHHHCHHH RKVMPELRKRIERAVLSLNSFSKSDTTFKKRIAQEIYHAIMDFSSAKVALTINNETIDLD HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEE LSKVDPYLVASIMLVESMMNPYAVAEERSIKQDFSDTIYSRGLMQIYETTFWQLKSWINN HHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SELDMTVDDLWSIRNNIFLGMVYLAYAQTLIER CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA