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The map label for this gene is 239616543

Identifier: 239616543

GI number: 239616543

Start: 152314

End: 153843

Strand: Direct

Name: 239616543

Synonym: Kole_0135

Alternate gene names: NA

Gene position: 152314-153843 (Clockwise)

Preceding gene: 239616542

Following gene: 239616544

Centisome position: 6.62

GC content: 40.92

Gene sequence:

>1530_bases
GTGAGAAAAGCTTTGATTCTTGCATTGGTAATGGTAATGGTTGTATCTACGGTTTCTTTATCGAGGGTAACATTGGATAC
TTTGACTTTTTACACCATCGATTTGGAGACAGGTAATAGTTCTATCTTTCCGATAGCTTACTTCACCTTTGAACCTATAA
AGGGGATAGGGATAAGGTTAGAAGATTATCTTGCCCTCAGCCACGATACGCTTAATCTTGGGCCAATCAGTCTGATGAAA
CCAAGGCTTTATTACGGCTACTATTACGGTAATGATTTGAGTATCAAGATCGGTAATTTCCGCTCGAAGTATTACAACAC
CAGAAAGATAAACTTCCTCAGGGTTGGAGGGTTCTACGATTACAATTACGGAGCCGAAGTAAAATACGATTACGGTAATT
TCACGTTCCTTGGAAGGTACAACTATGACAGTTACAATTCTGAACATCAATATGGAGGAATGATATCCTATAAAACCAAA
TCTTCTGCTCTTGCTTTCTACGGAATGGTTAAAGGCACAACTTATGACCTTTCTGTTGATGGAAGCCTGAAAGTAAAACT
TGGCCCAGTTTCCAGCGAAATTTTCGGTGCTGTTGCTGTTTACGGTTCATCTCCTTTCAGTGCTCCACCAACTTATCTCA
TCGGAGCTCTTGCTGATTGGAACAAGATTTCTGCTGGAATACAGTACGCAAATCAGGGCTCCTGGAGTATCAAATACGAT
TACTCAGATCCTAACAAGTATTCTGAATGGGTGTTAAATACTTTTGTTGATTATTACTTCACTTCTGATATCTCTGTTGG
TTTCTTCTTAGATGTGAATCCTACTGGATACAACTATGGAACAAAGTTCAAGTTGAACGATCTGGAACTGCTTGTTTCCA
ACGGTGATGTTGATGGTGGAATGGACGGTATCCAGAGACTGGAGCTTTCGTACTCGAACTATTTCTCCATTGACCTTGAA
AAATCATTCAAAGCCCTGATAAGGAGCACAAAGAAACTGCCGAAGATAGCTGAAATCAAGAAGACAGCTAAAGTGGGAGA
CACCGTAACTATCAGAGGAATCGTTGCCGTTGATACCGGCGTAATGGGTAACAACGTTACTTACGTCGTAGATGAAACAG
GCGGTTACATGGTCTGGGGAAGAAACGCTGCCGGATTGAAAGCAGGTGACGAGGTCATCATAACCGGTTACATCAAAGAA
TATTACGGTATTCTTGAAATTGTCACAAATTCTGTGGAAAAAATAGCTTCTGGTAAAAAGATACCCATTATCCCTGTTAG
AGCCCTTGATGTATTCTCCGGAAAATACGAATCAGCGCTGGTAAAGATCACAGGTACAGTCATGGAAGTCCAGAAATACT
CCATAATGGTCAAAGACGATTCTGGCGTAATAAAGGTTTACGCAAAGAAAGGAACAAATGTATCCTTCGAGGATATCTCC
TTCGGCCAGAAGATCACCGTTATCGGTATCGTTTCGTTGTTCAAAGGAGAATGGGAGATCATTCCAAGATCCCAGGCTGA
TATACAATAA

Upstream 100 bases:

>100_bases
ATAAAACACCGGGGCAAAACTTGCCCCGGTGTTTTGCTCTAACATAAATGATATGGTATCATTTTATTCCAAAAACAATT
GTTCCATCGGAGGTGATTGT

Downstream 100 bases:

>100_bases
TACATCGAGAAAGGAAAGGTGAAATATGAGTTCCCACAGATCTGTGATAAAGCAATCATGGCTGTATGTATCGTTAGTAA
TTTTAGTTTCAATCTCTGCG

Product: nucleic acid binding OB-fold tRNA/helicase-type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MRKALILALVMVMVVSTVSLSRVTLDTLTFYTIDLETGNSSIFPIAYFTFEPIKGIGIRLEDYLALSHDTLNLGPISLMK
PRLYYGYYYGNDLSIKIGNFRSKYYNTRKINFLRVGGFYDYNYGAEVKYDYGNFTFLGRYNYDSYNSEHQYGGMISYKTK
SSALAFYGMVKGTTYDLSVDGSLKVKLGPVSSEIFGAVAVYGSSPFSAPPTYLIGALADWNKISAGIQYANQGSWSIKYD
YSDPNKYSEWVLNTFVDYYFTSDISVGFFLDVNPTGYNYGTKFKLNDLELLVSNGDVDGGMDGIQRLELSYSNYFSIDLE
KSFKALIRSTKKLPKIAEIKKTAKVGDTVTIRGIVAVDTGVMGNNVTYVVDETGGYMVWGRNAAGLKAGDEVIITGYIKE
YYGILEIVTNSVEKIASGKKIPIIPVRALDVFSGKYESALVKITGTVMEVQKYSIMVKDDSGVIKVYAKKGTNVSFEDIS
FGQKITVIGIVSLFKGEWEIIPRSQADIQ

Sequences:

>Translated_509_residues
MRKALILALVMVMVVSTVSLSRVTLDTLTFYTIDLETGNSSIFPIAYFTFEPIKGIGIRLEDYLALSHDTLNLGPISLMK
PRLYYGYYYGNDLSIKIGNFRSKYYNTRKINFLRVGGFYDYNYGAEVKYDYGNFTFLGRYNYDSYNSEHQYGGMISYKTK
SSALAFYGMVKGTTYDLSVDGSLKVKLGPVSSEIFGAVAVYGSSPFSAPPTYLIGALADWNKISAGIQYANQGSWSIKYD
YSDPNKYSEWVLNTFVDYYFTSDISVGFFLDVNPTGYNYGTKFKLNDLELLVSNGDVDGGMDGIQRLELSYSNYFSIDLE
KSFKALIRSTKKLPKIAEIKKTAKVGDTVTIRGIVAVDTGVMGNNVTYVVDETGGYMVWGRNAAGLKAGDEVIITGYIKE
YYGILEIVTNSVEKIASGKKIPIIPVRALDVFSGKYESALVKITGTVMEVQKYSIMVKDDSGVIKVYAKKGTNVSFEDIS
FGQKITVIGIVSLFKGEWEIIPRSQADIQ
>Mature_509_residues
MRKALILALVMVMVVSTVSLSRVTLDTLTFYTIDLETGNSSIFPIAYFTFEPIKGIGIRLEDYLALSHDTLNLGPISLMK
PRLYYGYYYGNDLSIKIGNFRSKYYNTRKINFLRVGGFYDYNYGAEVKYDYGNFTFLGRYNYDSYNSEHQYGGMISYKTK
SSALAFYGMVKGTTYDLSVDGSLKVKLGPVSSEIFGAVAVYGSSPFSAPPTYLIGALADWNKISAGIQYANQGSWSIKYD
YSDPNKYSEWVLNTFVDYYFTSDISVGFFLDVNPTGYNYGTKFKLNDLELLVSNGDVDGGMDGIQRLELSYSNYFSIDLE
KSFKALIRSTKKLPKIAEIKKTAKVGDTVTIRGIVAVDTGVMGNNVTYVVDETGGYMVWGRNAAGLKAGDEVIITGYIKE
YYGILEIVTNSVEKIASGKKIPIIPVRALDVFSGKYESALVKITGTVMEVQKYSIMVKDDSGVIKVYAKKGTNVSFEDIS
FGQKITVIGIVSLFKGEWEIIPRSQADIQ

Specific function: Unknown

COG id: COG4085

COG function: function code R; Predicted RNA-binding protein, contains TRAM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56642; Mature: 56642

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKALILALVMVMVVSTVSLSRVTLDTLTFYTIDLETGNSSIFPIAYFTFEPIKGIGIRL
CCHHHHHHHHHHHHHHHCHHCEEEEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCEEE
EDYLALSHDTLNLGPISLMKPRLYYGYYYGNDLSIKIGNFRSKYYNTRKINFLRVGGFYD
EEEEEEECCCCCCCCHHEECCEEEEEEEECCEEEEEECCCHHHHCCCEEEEEEEECCEEE
YNYGAEVKYDYGNFTFLGRYNYDSYNSEHQYGGMISYKTKSSALAFYGMVKGTTYDLSVD
CCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCEEEEEEC
GSLKVKLGPVSSEIFGAVAVYGSSPFSAPPTYLIGALADWNKISAGIQYANQGSWSIKYD
CEEEEEECCCCHHHEEEEEEECCCCCCCCCHHEEEECCCCCHHHHCEEECCCCCEEEEEE
YSDPNKYSEWVLNTFVDYYFTSDISVGFFLDVNPTGYNYGTKFKLNDLELLVSNGDVDGG
CCCCCHHHHHHHHHHHHHEEECCCEEEEEEEECCCCCCCCCEEEECCEEEEEECCCCCCC
MDGIQRLELSYSNYFSIDLEKSFKALIRSTKKLPKIAEIKKTAKVGDTVTIRGIVAVDTG
HHHHHEEEEECCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEEEEECC
VMGNNVTYVVDETGGYMVWGRNAAGLKAGDEVIITGYIKEYYGILEIVTNSVEKIASGKK
CCCCCEEEEEECCCCEEEECCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCC
IPIIPVRALDVFSGKYESALVKITGTVMEVQKYSIMVKDDSGVIKVYAKKGTNVSFEDIS
CEEEEEEEEEECCCCCCEEEEEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCCEEHHCC
FGQKITVIGIVSLFKGEWEIIPRSQADIQ
CCCEEEEEEEEEHHCCCEEEECCCCCCCC
>Mature Secondary Structure
MRKALILALVMVMVVSTVSLSRVTLDTLTFYTIDLETGNSSIFPIAYFTFEPIKGIGIRL
CCHHHHHHHHHHHHHHHCHHCEEEEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCEEE
EDYLALSHDTLNLGPISLMKPRLYYGYYYGNDLSIKIGNFRSKYYNTRKINFLRVGGFYD
EEEEEEECCCCCCCCHHEECCEEEEEEEECCEEEEEECCCHHHHCCCEEEEEEEECCEEE
YNYGAEVKYDYGNFTFLGRYNYDSYNSEHQYGGMISYKTKSSALAFYGMVKGTTYDLSVD
CCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEEEECCCEEEEEEC
GSLKVKLGPVSSEIFGAVAVYGSSPFSAPPTYLIGALADWNKISAGIQYANQGSWSIKYD
CEEEEEECCCCHHHEEEEEEECCCCCCCCCHHEEEECCCCCHHHHCEEECCCCCEEEEEE
YSDPNKYSEWVLNTFVDYYFTSDISVGFFLDVNPTGYNYGTKFKLNDLELLVSNGDVDGG
CCCCCHHHHHHHHHHHHHEEECCCEEEEEEEECCCCCCCCCEEEECCEEEEEECCCCCCC
MDGIQRLELSYSNYFSIDLEKSFKALIRSTKKLPKIAEIKKTAKVGDTVTIRGIVAVDTG
HHHHHEEEEECCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEEEEECC
VMGNNVTYVVDETGGYMVWGRNAAGLKAGDEVIITGYIKEYYGILEIVTNSVEKIASGKK
CCCCCEEEEEECCCCEEEECCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCC
IPIIPVRALDVFSGKYESALVKITGTVMEVQKYSIMVKDDSGVIKVYAKKGTNVSFEDIS
CEEEEEEEEEECCCCCCEEEEEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCCEEHHCC
FGQKITVIGIVSLFKGEWEIIPRSQADIQ
CCCEEEEEEEEEHHCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA