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The map label for this gene is rpfG [H]

Identifier: 239616508

GI number: 239616508

Start: 113672

End: 115282

Strand: Direct

Name: rpfG [H]

Synonym: Kole_0098

Alternate gene names: 239616508

Gene position: 113672-115282 (Clockwise)

Preceding gene: 239616507

Following gene: 239616509

Centisome position: 4.94

GC content: 39.23

Gene sequence:

>1611_bases
GTGAGGAAATTCATAAAACATAATGGTGCTTTTTTATTGATCGTTATAATTCTTACTACACTCTTTTGGATAGTTGTCCA
CCGCGGTGAGAATCAGATATATGAAAAAGAAGCGAAATGGCAGTACGAAAGCACGATTTCCCAATTACTCACCGCTGAAG
AGATCATCAGAGTGCAATTTCACGATTTTGAACGGGTCTTGTTTTTGCTCAAAAGCATTCCAAATACCAGAAGCTATGTA
AACACCAATTTTGAATCCGTTAGTTATAAGAATAAAGTTAAAGAGATCTTCTTTGAATTAGCAAAGGTTTTCAAGCACTT
TTATAAGATCAGGATCATCGATTCTTCGGGACAGGAGATAATCAAAGTTGCTCGTGGATCAGATGGTACAGCAATAATTG
CTCCCGGTTCACAATTACAGAATAAAAGAAACCGTTACTATTTTCAAGAAGCCATGAAGATGGATGAAAACCAGATCTAC
GTTTCTCCGATAGATTTGAACATTGAAAACGGAAAGATAGAAATGCCCTATACCCCGGTAATAAGGCTGGCAACCCCTCT
GTTTGATTCTAAAGGAGAAAAAAGGGGAATCTTGGTTCTAAGCGTGGAATTTTCAAAAGTCCTTGAATTGTTGCCCAAAA
ACGTTTTCATCCAGACTGAAGATGGATACTTAATATCGTCAAACTCAGATAAATCAGTTAATTTCCGTAAATCCGATTAC
AACTTCCCCGATGATTCCGGCCATATAGAGCTTTCAGATATAGAAACCATCCACTATTCTACTGTTGACTTTCTTCCAGG
CAATCGCCTAATCGTTGCATCATATCACAAACACCCAACATCGAAAGCGGCACTCCAAAACCTGACATTGATATCAATGC
TGATCTTTATTTTATTTCTCGTCCTGATGTTTGCAGGTGTTTATTTGGATTTCTCGAAATCAAGAGATCTGTTGGGAGCG
CAAAAAGCTATCATGTCTTCTCTTGCTACGCTTGCTGAACGAAGGGATACCGAAACTGGACGCCATTTAAAAAGAACGAG
AGAGTACGCGGTGATACTGACAAAACAACTGCGCAAAAACAAGAAATACCGGAAAATCATCACAAATGAATTCATTGAGA
ACCTTTACGATACCGCACCCTTGCACGACATGGGAAAGGTAGGGATACGGGATTCTATCCTGTTGAAGGAAGGAAAGTTA
ACAAAAGAGGAATATGAAGAGATAAAAAAACACACCATAATAGGAAAACAGATCATTCAGGATGTTATCGGTAGATACAG
ATTGAAAGGGTCATACATTATCATGGCAAGAAACATCTGTGCGTATCATCACGAAAAACACAATGGCGAAGGGTACCCGG
AAGGCCTAAAAGGAGAAAAAATTCCTCTAGAAGCGAGAATCTTTGCCCTGTGTGATGCCTACGACGCCATAAGGTCAAAA
AGACCTTATAAAGATGAATTACCGCATGAAGAAGCGATCAGGAGGATCAAAGCTGATAGAGGAAAACACTTTGATCCCGA
TATTGTCGATGCTTTCCTGGAATGTGAGAAGGAGTTTGAAAGGGTGTATGAAACCTACAAATACGATCAAGGAATCGGCT
TTGTAATCTAA

Upstream 100 bases:

>100_bases
GTAAGGTATTATATGATACACTAATGTTACGTAGATGTAGTTTTGTTACTGAGCCTCGGGACCCTATTTTCTTCAGTAAT
ATTGGTAAGAGGTCGATAAT

Downstream 100 bases:

>100_bases
GATGTATGCGTGAATATAAAAACAGCTGTCCGATTTCGGACAGCTGTTTTTATAAGAATATCTTCCTGACTACCACCTTT
ATTCTATTAATTCATTCCTT

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MRKFIKHNGAFLLIVIILTTLFWIVVHRGENQIYEKEAKWQYESTISQLLTAEEIIRVQFHDFERVLFLLKSIPNTRSYV
NTNFESVSYKNKVKEIFFELAKVFKHFYKIRIIDSSGQEIIKVARGSDGTAIIAPGSQLQNKRNRYYFQEAMKMDENQIY
VSPIDLNIENGKIEMPYTPVIRLATPLFDSKGEKRGILVLSVEFSKVLELLPKNVFIQTEDGYLISSNSDKSVNFRKSDY
NFPDDSGHIELSDIETIHYSTVDFLPGNRLIVASYHKHPTSKAALQNLTLISMLIFILFLVLMFAGVYLDFSKSRDLLGA
QKAIMSSLATLAERRDTETGRHLKRTREYAVILTKQLRKNKKYRKIITNEFIENLYDTAPLHDMGKVGIRDSILLKEGKL
TKEEYEEIKKHTIIGKQIIQDVIGRYRLKGSYIIMARNICAYHHEKHNGEGYPEGLKGEKIPLEARIFALCDAYDAIRSK
RPYKDELPHEEAIRRIKADRGKHFDPDIVDAFLECEKEFERVYETYKYDQGIGFVI

Sequences:

>Translated_536_residues
MRKFIKHNGAFLLIVIILTTLFWIVVHRGENQIYEKEAKWQYESTISQLLTAEEIIRVQFHDFERVLFLLKSIPNTRSYV
NTNFESVSYKNKVKEIFFELAKVFKHFYKIRIIDSSGQEIIKVARGSDGTAIIAPGSQLQNKRNRYYFQEAMKMDENQIY
VSPIDLNIENGKIEMPYTPVIRLATPLFDSKGEKRGILVLSVEFSKVLELLPKNVFIQTEDGYLISSNSDKSVNFRKSDY
NFPDDSGHIELSDIETIHYSTVDFLPGNRLIVASYHKHPTSKAALQNLTLISMLIFILFLVLMFAGVYLDFSKSRDLLGA
QKAIMSSLATLAERRDTETGRHLKRTREYAVILTKQLRKNKKYRKIITNEFIENLYDTAPLHDMGKVGIRDSILLKEGKL
TKEEYEEIKKHTIIGKQIIQDVIGRYRLKGSYIIMARNICAYHHEKHNGEGYPEGLKGEKIPLEARIFALCDAYDAIRSK
RPYKDELPHEEAIRRIKADRGKHFDPDIVDAFLECEKEFERVYETYKYDQGIGFVI
>Mature_536_residues
MRKFIKHNGAFLLIVIILTTLFWIVVHRGENQIYEKEAKWQYESTISQLLTAEEIIRVQFHDFERVLFLLKSIPNTRSYV
NTNFESVSYKNKVKEIFFELAKVFKHFYKIRIIDSSGQEIIKVARGSDGTAIIAPGSQLQNKRNRYYFQEAMKMDENQIY
VSPIDLNIENGKIEMPYTPVIRLATPLFDSKGEKRGILVLSVEFSKVLELLPKNVFIQTEDGYLISSNSDKSVNFRKSDY
NFPDDSGHIELSDIETIHYSTVDFLPGNRLIVASYHKHPTSKAALQNLTLISMLIFILFLVLMFAGVYLDFSKSRDLLGA
QKAIMSSLATLAERRDTETGRHLKRTREYAVILTKQLRKNKKYRKIITNEFIENLYDTAPLHDMGKVGIRDSILLKEGKL
TKEEYEEIKKHTIIGKQIIQDVIGRYRLKGSYIIMARNICAYHHEKHNGEGYPEGLKGEKIPLEARIFALCDAYDAIRSK
RPYKDELPHEEAIRRIKADRGKHFDPDIVDAFLECEKEFERVYETYKYDQGIGFVI

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 62243; Mature: 62243

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFIKHNGAFLLIVIILTTLFWIVVHRGENQIYEKEAKWQYESTISQLLTAEEIIRVQF
CCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDFERVLFLLKSIPNTRSYVNTNFESVSYKNKVKEIFFELAKVFKHFYKIRIIDSSGQEI
HHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHH
IKVARGSDGTAIIAPGSQLQNKRNRYYFQEAMKMDENQIYVSPIDLNIENGKIEMPYTPV
HHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEECCCCCH
IRLATPLFDSKGEKRGILVLSVEFSKVLELLPKNVFIQTEDGYLISSNSDKSVNFRKSDY
HHHHHHHHCCCCCCCCEEEEEECHHHHHHHCCCCEEEEECCCEEEECCCCCCEEEECCCC
NFPDDSGHIELSDIETIHYSTVDFLPGNRLIVASYHKHPTSKAALQNLTLISMLIFILFL
CCCCCCCCEEEECCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VLMFAGVYLDFSKSRDLLGAQKAIMSSLATLAERRDTETGRHLKRTREYAVILTKQLRKN
HHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
KKYRKIITNEFIENLYDTAPLHDMGKVGIRDSILLKEGKLTKEEYEEIKKHTIIGKQIIQ
HHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
DVIGRYRLKGSYIIMARNICAYHHEKHNGEGYPEGLKGEKIPLEARIFALCDAYDAIRSK
HHHHHEEECCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
RPYKDELPHEEAIRRIKADRGKHFDPDIVDAFLECEKEFERVYETYKYDQGIGFVI
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRKFIKHNGAFLLIVIILTTLFWIVVHRGENQIYEKEAKWQYESTISQLLTAEEIIRVQF
CCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDFERVLFLLKSIPNTRSYVNTNFESVSYKNKVKEIFFELAKVFKHFYKIRIIDSSGQEI
HHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHH
IKVARGSDGTAIIAPGSQLQNKRNRYYFQEAMKMDENQIYVSPIDLNIENGKIEMPYTPV
HHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEECCCCCH
IRLATPLFDSKGEKRGILVLSVEFSKVLELLPKNVFIQTEDGYLISSNSDKSVNFRKSDY
HHHHHHHHCCCCCCCCEEEEEECHHHHHHHCCCCEEEEECCCEEEECCCCCCEEEECCCC
NFPDDSGHIELSDIETIHYSTVDFLPGNRLIVASYHKHPTSKAALQNLTLISMLIFILFL
CCCCCCCCEEEECCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VLMFAGVYLDFSKSRDLLGAQKAIMSSLATLAERRDTETGRHLKRTREYAVILTKQLRKN
HHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
KKYRKIITNEFIENLYDTAPLHDMGKVGIRDSILLKEGKLTKEEYEEIKKHTIIGKQIIQ
HHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
DVIGRYRLKGSYIIMARNICAYHHEKHNGEGYPEGLKGEKIPLEARIFALCDAYDAIRSK
HHHHHEEECCCEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
RPYKDELPHEEAIRRIKADRGKHFDPDIVDAFLECEKEFERVYETYKYDQGIGFVI
CCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]