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The map label for this gene is rpiB [H]

Identifier: 239616431

GI number: 239616431

Start: 29123

End: 29578

Strand: Direct

Name: rpiB [H]

Synonym: Kole_0020

Alternate gene names: 239616431

Gene position: 29123-29578 (Clockwise)

Preceding gene: 239616430

Following gene: 239616432

Centisome position: 1.27

GC content: 46.05

Gene sequence:

>456_bases
GTGAAGGTGGCTATTGCTTCAGATCACGCGGGATTCGCTATGAAAAAAGAACTCATAGATTTTTTAAGCTCAGCAGGATA
TGAAATTACTGACTACGGCACATATTCTGAAGAGTCGGTAGATTATCCCGATTATGCCGCGAAGGTCGCAGAGGCGGTTA
CTGAAGGAACAGCAGAGCGCGGAATCCTTATTTGTGGAACAGGGCTCGGAATGTCCATAGCTGCTAATCGTTATAAAGGG
GTAAGGGCAGCGCTATGTCTTTATCCCGAAATGGCAAGAATGACAAGAAAACATAATGATGCGAACGTTCTCGTATTAAG
TGGAAGATTAATCGGTGTTGAACTTGCCAGGAGAATCGTAGAGGTGTTCTTTGAAACCGGGTTCGAGGGTGGTCGCCACG
AACGCAGAATAAGAAAGATCGATGATCTACCGGATCTACGGAGGCGGTCTGATTGA

Upstream 100 bases:

>100_bases
TGCTTCCCATTGTTCTGGAAGCTGACAGGGTAAAAATCCAGGGGAAGCTGGTTGGACTATTGAGATGGTATAAATAGATT
AGGATTTCGAGGTGATGATT

Downstream 100 bases:

>100_bases
AGATTTTTTATGATCGTCGTCATCTCCTGCACATTCCAAAAAAAGAGATGGACAACGGAAAGTGGGTAGAAAATGCCGAT
AAACCGGATCGTATCGAAGC

Product: ribose 5-phosphate isomerase B

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKVAIASDHAGFAMKKELIDFLSSAGYEITDYGTYSEESVDYPDYAAKVAEAVTEGTAERGILICGTGLGMSIAANRYKG
VRAALCLYPEMARMTRKHNDANVLVLSGRLIGVELARRIVEVFFETGFEGGRHERRIRKIDDLPDLRRRSD

Sequences:

>Translated_151_residues
MKVAIASDHAGFAMKKELIDFLSSAGYEITDYGTYSEESVDYPDYAAKVAEAVTEGTAERGILICGTGLGMSIAANRYKG
VRAALCLYPEMARMTRKHNDANVLVLSGRLIGVELARRIVEVFFETGFEGGRHERRIRKIDDLPDLRRRSD
>Mature_151_residues
MKVAIASDHAGFAMKKELIDFLSSAGYEITDYGTYSEESVDYPDYAAKVAEAVTEGTAERGILICGTGLGMSIAANRYKG
VRAALCLYPEMARMTRKHNDANVLVLSGRLIGVELARRIVEVFFETGFEGGRHERRIRKIDDLPDLRRRSD

Specific function: In addition to its activity on D-ribose 5-phosphate it probably also has activity on D-allose 6-phosphate [H]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=146, Percent_Identity=46.5753424657534, Blast_Score=152, Evalue=8e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 16765; Mature: 16765

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAIASDHAGFAMKKELIDFLSSAGYEITDYGTYSEESVDYPDYAAKVAEAVTEGTAER
CEEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
GILICGTGLGMSIAANRYKGVRAALCLYPEMARMTRKHNDANVLVLSGRLIGVELARRIV
CEEEEECCCCCHHHHHHHCHHHHHHHHCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH
EVFFETGFEGGRHERRIRKIDDLPDLRRRSD
HHHHHCCCCCCHHHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure
MKVAIASDHAGFAMKKELIDFLSSAGYEITDYGTYSEESVDYPDYAAKVAEAVTEGTAER
CEEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
GILICGTGLGMSIAANRYKGVRAALCLYPEMARMTRKHNDANVLVLSGRLIGVELARRIV
CEEEEECCCCCHHHHHHHCHHHHHHHHCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH
EVFFETGFEGGRHERRIRKIDDLPDLRRRSD
HHHHHCCCCCCHHHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8576032; 7610040; 9278503; 1840580; 7984428; 9401019 [H]