| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is gufA [H]
Identifier: 239616426
GI number: 239616426
Start: 20454
End: 21197
Strand: Direct
Name: gufA [H]
Synonym: Kole_0015
Alternate gene names: 239616426
Gene position: 20454-21197 (Clockwise)
Preceding gene: 239616425
Following gene: 239616427
Centisome position: 0.89
GC content: 47.58
Gene sequence:
>744_bases ATGACCCCGGCAATCAAAGGAATTGTTTATAGTTTGATTGCTGGAATGGCTACCTCGATAGGTGCAATTCCCTTTCTTTT CTGGAAGAAGGGGGTGGATAGGCGTTCTCTCGATATGTTGCTTGGACTTGCCGCCGGCATAATGCTGGCCGCGACAGCTT TCAGCCTTGTTGTTCCTTCGATACAGATCGGAGGACCGTTTCGCTTTGTTGTTGGATTTATTCTTGGAGCAATCTTCGTC GATTTAATGGATAAATTCTCACCGCACGAACACTTCATTAAAGGTTACGAAGGCCCAATGACAAAATCAAAACTCTCCAA GATCTGGTTGTTTGTCATTGCAATAACGCTGCACAACTTTCCAGAAGGCATGGCGGTTGGTGTTGGAGGCTTTACGAAGG ACGCATTCGCTATCGCAATGGCGATAGGTATTCAAAATATTCCTGAAGGAGCCGCAGTTGCCGGCAGCCTCATCGGCGCC GGGTACAGTGTCAGGCGCTCTTTCTGGGTGACCTTTCTAACCGGTGCCGTCGAAATTATCGGTGGCGCTCTTGGTGCATT CCTTATAACGATATCTCAACCTCTGTTGCCGTATGCTATGGCTTTTGCCGGTGGAGCGATGCTGTATGTGATCGGAGATG AGATAATCCCGGAAACCCACAGTGGGGGATATCAAAGGATCTCAACATATTCTCTTCTCATCGGGTTTATCATAATGACT CTTCTGGATAATTTGCTCGGTTGA
Upstream 100 bases:
>100_bases AAAAGACATCTTCTTATTACTATTACTACTACCATTATTACTATACTCAGGATGGAACAAAAAAGAAAATCAGACGAAAA AAATCCAGGAGGACCGGTGA
Downstream 100 bases:
>100_bases TTTTGTAGATGTCAGAGGTGATTTTTGTGGAAAATAAAGCTTACAACAGCACTTTCAAAGCTCAACTTTTTATCTATTAT ATGATGAGTGTGGTGATACC
Product: zinc/iron permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTPAIKGIVYSLIAGMATSIGAIPFLFWKKGVDRRSLDMLLGLAAGIMLAATAFSLVVPSIQIGGPFRFVVGFILGAIFV DLMDKFSPHEHFIKGYEGPMTKSKLSKIWLFVIAITLHNFPEGMAVGVGGFTKDAFAIAMAIGIQNIPEGAAVAGSLIGA GYSVRRSFWVTFLTGAVEIIGGALGAFLITISQPLLPYAMAFAGGAMLYVIGDEIIPETHSGGYQRISTYSLLIGFIIMT LLDNLLG
Sequences:
>Translated_247_residues MTPAIKGIVYSLIAGMATSIGAIPFLFWKKGVDRRSLDMLLGLAAGIMLAATAFSLVVPSIQIGGPFRFVVGFILGAIFV DLMDKFSPHEHFIKGYEGPMTKSKLSKIWLFVIAITLHNFPEGMAVGVGGFTKDAFAIAMAIGIQNIPEGAAVAGSLIGA GYSVRRSFWVTFLTGAVEIIGGALGAFLITISQPLLPYAMAFAGGAMLYVIGDEIIPETHSGGYQRISTYSLLIGFIIMT LLDNLLG >Mature_246_residues TPAIKGIVYSLIAGMATSIGAIPFLFWKKGVDRRSLDMLLGLAAGIMLAATAFSLVVPSIQIGGPFRFVVGFILGAIFVD LMDKFSPHEHFIKGYEGPMTKSKLSKIWLFVIAITLHNFPEGMAVGVGGFTKDAFAIAMAIGIQNIPEGAAVAGSLIGAG YSVRRSFWVTFLTGAVEIIGGALGAFLITISQPLLPYAMAFAGGAMLYVIGDEIIPETHSGGYQRISTYSLLIGFIIMTL LDNLLG
Specific function: Mediates Zinc Uptake. May Also Transport Other Divalent Cations Such As Copper And Cadmium Ions. [C]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI229577418, Length=154, Percent_Identity=46.7532467532467, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI229577422, Length=154, Percent_Identity=46.7532467532467, Blast_Score=132, Evalue=2e-31, Organism=Escherichia coli, GI1789419, Length=243, Percent_Identity=32.9218106995885, Blast_Score=82, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17507805, Length=301, Percent_Identity=33.5548172757475, Blast_Score=137, Evalue=7e-33, Organism=Drosophila melanogaster, GI24652846, Length=150, Percent_Identity=46.6666666666667, Blast_Score=129, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 26172; Mature: 26040
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAIKGIVYSLIAGMATSIGAIPFLFWKKGVDRRSLDMLLGLAAGIMLAATAFSLVVPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC IQIGGPFRFVVGFILGAIFVDLMDKFSPHEHFIKGYEGPMTKSKLSKIWLFVIAITLHNF CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC PEGMAVGVGGFTKDAFAIAMAIGIQNIPEGAAVAGSLIGAGYSVRRSFWVTFLTGAVEII CCCCEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH GGALGAFLITISQPLLPYAMAFAGGAMLYVIGDEIIPETHSGGYQRISTYSLLIGFIIMT HHHHHHHHHHHHCHHHHHHHHHHCCEEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHH LLDNLLG HHHHHCC >Mature Secondary Structure TPAIKGIVYSLIAGMATSIGAIPFLFWKKGVDRRSLDMLLGLAAGIMLAATAFSLVVPS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC IQIGGPFRFVVGFILGAIFVDLMDKFSPHEHFIKGYEGPMTKSKLSKIWLFVIAITLHNF CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC PEGMAVGVGGFTKDAFAIAMAIGIQNIPEGAAVAGSLIGAGYSVRRSFWVTFLTGAVEII CCCCEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH GGALGAFLITISQPLLPYAMAFAGGAMLYVIGDEIIPETHSGGYQRISTYSLLIGFIIMT HHHHHHHHHHHHCHHHHHHHHHHCCEEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHH LLDNLLG HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934835 [H]