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The map label for this gene is fliS [H]

Identifier: 238925599

GI number: 238925599

Start: 3092491

End: 3092886

Strand: Reverse

Name: fliS [H]

Synonym: EUBREC_3255

Alternate gene names: 238925599

Gene position: 3092886-3092491 (Counterclockwise)

Preceding gene: 238925600

Following gene: 238925598

Centisome position: 89.66

GC content: 44.44

Gene sequence:

>396_bases
ATGTTACAAAGCAAAGGATACGCAGTATATGCAAACAGCAAGGTTCAGACAGCATCGCCAGCGGAGCTGACACTCATGCT
CTACGAGGCAGCCATCAAGTTCTGCAACATAGCAGAGATGGCTATAGAGAAAAATGACATACAGAAAGCACACGATAATA
TCAAAAAGGTAGAGGCAATCATCGAAGAATTTCAGGCCACCCTGAATCACAAATATCCGGTAGCAAAGGATTTCGACAAG
GTATATACATACCTCATGCAGAGACTGGTTGAGGCAAATATCAAGAAAGATACAAAGATACTCGATGAAGTGCTTGAGCA
CCTGCGTACCATGAGAGATGCATGGAAAGAGGTCATGCGTGTCACTTGCAACGGAAGCAAGGTAGGCGTGTCGTAA

Upstream 100 bases:

>100_bases
TTCTCATAAAGAATAACCATACATGAGTCAGAATGTGTGAAATATATTGAAAATGTACATTTCAACAAGCAGTAAATGTA
CGAAATCAGGGAGGTAACAA

Downstream 100 bases:

>100_bases
AACAAAAAATAATAACGATAAAAGACAAAAAGGCTATTGCAAAGTTATGGAGCTTGGCAATAGCCTTTTTGAAAGGAGAA
CACCATGGAACAGACATACA

Product: flagellar protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MLQSKGYAVYANSKVQTASPAELTLMLYEAAIKFCNIAEMAIEKNDIQKAHDNIKKVEAIIEEFQATLNHKYPVAKDFDK
VYTYLMQRLVEANIKKDTKILDEVLEHLRTMRDAWKEVMRVTCNGSKVGVS

Sequences:

>Translated_131_residues
MLQSKGYAVYANSKVQTASPAELTLMLYEAAIKFCNIAEMAIEKNDIQKAHDNIKKVEAIIEEFQATLNHKYPVAKDFDK
VYTYLMQRLVEANIKKDTKILDEVLEHLRTMRDAWKEVMRVTCNGSKVGVS
>Mature_131_residues
MLQSKGYAVYANSKVQTASPAELTLMLYEAAIKFCNIAEMAIEKNDIQKAHDNIKKVEAIIEEFQATLNHKYPVAKDFDK
VYTYLMQRLVEANIKKDTKILDEVLEHLRTMRDAWKEVMRVTCNGSKVGVS

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 14987; Mature: 14987

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQSKGYAVYANSKVQTASPAELTLMLYEAAIKFCNIAEMAIEKNDIQKAHDNIKKVEAI
CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEEFQATLNHKYPVAKDFDKVYTYLMQRLVEANIKKDTKILDEVLEHLRTMRDAWKEVMR
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VTCNGSKVGVS
HHCCCCCCCCC
>Mature Secondary Structure
MLQSKGYAVYANSKVQTASPAELTLMLYEAAIKFCNIAEMAIEKNDIQKAHDNIKKVEAI
CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEEFQATLNHKYPVAKDFDKVYTYLMQRLVEANIKKDTKILDEVLEHLRTMRDAWKEVMR
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VTCNGSKVGVS
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377 [H]