Definition | Eubacterium rectale ATCC 33656, complete genome. |
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Accession | NC_012781 |
Length | 3,449,685 |
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The map label for this gene is 238925598
Identifier: 238925598
GI number: 238925598
Start: 3091930
End: 3092406
Strand: Reverse
Name: 238925598
Synonym: EUBREC_3254
Alternate gene names: NA
Gene position: 3092406-3091930 (Counterclockwise)
Preceding gene: 238925599
Following gene: 238925597
Centisome position: 89.64
GC content: 40.67
Gene sequence:
>477_bases ATGGAACAGACATACATCGCAATAATGATACAAAGCCTGGAGAAAAAAGAGCAGGTACTTGACAAAATAATAGAGCTTGA CACGGTACAGAAAAACCAGCTTGAAGACCCAAACCTCACACCGGACGATTTTGATGATGTTGTAGAGCAGAAATCAAAGC TAATAGAGCAGTTAGACAACCTGGACAGTGGCTTTGAAAAGCTCTTTGAGCGCGTAAAAGAAGAGCTTGAAGGCAACAAA GAGACATACAAAGAAGAAATCCGCATCATGCAGGATCATATCCGTAAAATCACAGACAAGAGCGTGAAAATCCAAAGCCA GGAAGCCAGAAACAAAGCCCTTATGACAAACAAATTCAACGGAATAAAAAAACAGGCCAGACAAGTGCGAAAGGGCGCAA ATGTGGCCAGCAAATATTATCAGTCAATGACAAAGACAGGATATGTAGATCCACAGTTCATGGATAATAAAAAGTGA
Upstream 100 bases:
>100_bases GGTAGGCGTGTCGTAAAACAAAAAATAATAACGATAAAAGACAAAAAGGCTATTGCAAAGTTATGGAGCTTGGCAATAGC CTTTTTGAAAGGAGAACACC
Downstream 100 bases:
>100_bases AAATGGGTGGATGGAATTGACAAATGCTGTAAAATCAATGCGTCAAAAGAAAATTTAAAAAAATTTAAAAGAGGTATAAA GTATCGAAAGACTCGTCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MEQTYIAIMIQSLEKKEQVLDKIIELDTVQKNQLEDPNLTPDDFDDVVEQKSKLIEQLDNLDSGFEKLFERVKEELEGNK ETYKEEIRIMQDHIRKITDKSVKIQSQEARNKALMTNKFNGIKKQARQVRKGANVASKYYQSMTKTGYVDPQFMDNKK
Sequences:
>Translated_158_residues MEQTYIAIMIQSLEKKEQVLDKIIELDTVQKNQLEDPNLTPDDFDDVVEQKSKLIEQLDNLDSGFEKLFERVKEELEGNK ETYKEEIRIMQDHIRKITDKSVKIQSQEARNKALMTNKFNGIKKQARQVRKGANVASKYYQSMTKTGYVDPQFMDNKK >Mature_158_residues MEQTYIAIMIQSLEKKEQVLDKIIELDTVQKNQLEDPNLTPDDFDDVVEQKSKLIEQLDNLDSGFEKLFERVKEELEGNK ETYKEEIRIMQDHIRKITDKSVKIQSQEARNKALMTNKFNGIKKQARQVRKGANVASKYYQSMTKTGYVDPQFMDNKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18550; Mature: 18550
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQTYIAIMIQSLEKKEQVLDKIIELDTVQKNQLEDPNLTPDDFDDVVEQKSKLIEQLDN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC LDSGFEKLFERVKEELEGNKETYKEEIRIMQDHIRKITDKSVKIQSQEARNKALMTNKFN CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIKKQARQVRKGANVASKYYQSMTKTGYVDPQFMDNKK HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHCCCCC >Mature Secondary Structure MEQTYIAIMIQSLEKKEQVLDKIIELDTVQKNQLEDPNLTPDDFDDVVEQKSKLIEQLDN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC LDSGFEKLFERVKEELEGNKETYKEEIRIMQDHIRKITDKSVKIQSQEARNKALMTNKFN CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIKKQARQVRKGANVASKYYQSMTKTGYVDPQFMDNKK HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA