| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925569
Identifier: 238925569
GI number: 238925569
Start: 3068201
End: 3069526
Strand: Reverse
Name: 238925569
Synonym: EUBREC_3225
Alternate gene names: NA
Gene position: 3069526-3068201 (Counterclockwise)
Preceding gene: 238925570
Following gene: 238925568
Centisome position: 88.98
GC content: 34.54
Gene sequence:
>1326_bases ATGGTAGACTTTAATAATACGTTGGAAAGTGCGGTGAAATCCGTATTAAAATGGGAAGAAAAGCAAATCATAACAGAGAC AACAATTATAAGAGATGTACAGGGTAAAGTGTCTTTATTTCTTAAAAGTGAGCAGAAAGCAACGGAAAGTGATATTAGTA ATCTTGAGGAAATATTACAAAACGATCTGAACGGTTTTTTCACAGGAAAGATATTTTGGGAAAAATGTGACAAAAAAGAT AAACTACGAATAGAAATCATAAAATCAATTATTGAGGAAAGCAGGGAAGAATGGAAAACGGAAGATGGCGTTGACTTTTA TATATGTGAAAGACCCATCGCAAAAAAAGCATGGGTAAATGCAACACAAGATGTAGAACCGGTATGGCAATATCAGGAGG CTGAATGTTCAAATAAAGCTAAAGTGGTTACTTTTTATTCATTTAAAGGAGGAATGGGAAGGACAACCGCTTTAGCTGGA ATAGCATTGAATTTGATAGAACAAAATAAGAATGTTATGATGATAGATATGGATATAGAAGCTCCAGGTCTATCGACTTT ATTTTTCGATGATATTGTAGTTGAAAAAGGACTATTGGACTATCTGATAGAGAGACCATTAAATGAGCAATGTGATATCC ATGATTATGTATTGGAGGTTACGGATCCAGCTTTACTCAAAGAGAACGATGGTAATTTATATTTAATGCCAGCCGGTAAA GTAGACGAAACATACTTACAGAAATTAGCGAGGATAGATTATCAGGATAACAGGGAAAATAACTTAAAAAGCTCAATAAA AAATTTGTTGGAAAAATTGGATAATACATATCATCCAGATTATATTTTGATTGATGCACGTGCTGGTTTTCATGACATGG GTGGAATTGCAGTAGCACAGATTCCACATGGGGCTGTTCTGATTGGTAATGGAAGCAAACAATCATGGGATGGAATGACA CAGGTAATAAGAACAATTGCAAAGGGAAATACAGAAGAGTTTTCAATTATGATTGTGGATTCTATGTGTGAAAGAGCAAC AGCGGAAAGGGCAATTGAGCAGAGAAAAAAATTCCTTAATATGGCATATACGGTATGTATGGAAAATTATTATAATGAAG ATCAGGTAATGCCGGGAATAGATGCCGAAGGTGTAGAACATCAACCTGAATATATTCCATATGATTCTGAATTGATGCAG GGATTTGAATTGTTTTCAGATGGATATAATGATAGTGAAATAAGGGTACAGGCATATAGAGATTTGTTGACAGGAAGTGC ATATAAAGACATAACTAAGAGAATACAGAGTTGGTTTGGTGAATGA
Upstream 100 bases:
>100_bases GATGTTGTTAAATGCAGAGAAAATGCTATGGCATATGTAAGAGAAATGCTAAGATTATATGTTGATGGATACATAAAAAA CACGTAGGAGAGATTGGAAG
Downstream 100 bases:
>100_bases GTATGGATTTGCAAGAAAAAATAGAAATTTTACAACAGATAGGAAATTGTGTATCAGAAAACGGTGCCGCAGAAAATGAA GAAAATGTATTGCAGAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MVDFNNTLESAVKSVLKWEEKQIITETTIIRDVQGKVSLFLKSEQKATESDISNLEEILQNDLNGFFTGKIFWEKCDKKD KLRIEIIKSIIEESREEWKTEDGVDFYICERPIAKKAWVNATQDVEPVWQYQEAECSNKAKVVTFYSFKGGMGRTTALAG IALNLIEQNKNVMMIDMDIEAPGLSTLFFDDIVVEKGLLDYLIERPLNEQCDIHDYVLEVTDPALLKENDGNLYLMPAGK VDETYLQKLARIDYQDNRENNLKSSIKNLLEKLDNTYHPDYILIDARAGFHDMGGIAVAQIPHGAVLIGNGSKQSWDGMT QVIRTIAKGNTEEFSIMIVDSMCERATAERAIEQRKKFLNMAYTVCMENYYNEDQVMPGIDAEGVEHQPEYIPYDSELMQ GFELFSDGYNDSEIRVQAYRDLLTGSAYKDITKRIQSWFGE
Sequences:
>Translated_441_residues MVDFNNTLESAVKSVLKWEEKQIITETTIIRDVQGKVSLFLKSEQKATESDISNLEEILQNDLNGFFTGKIFWEKCDKKD KLRIEIIKSIIEESREEWKTEDGVDFYICERPIAKKAWVNATQDVEPVWQYQEAECSNKAKVVTFYSFKGGMGRTTALAG IALNLIEQNKNVMMIDMDIEAPGLSTLFFDDIVVEKGLLDYLIERPLNEQCDIHDYVLEVTDPALLKENDGNLYLMPAGK VDETYLQKLARIDYQDNRENNLKSSIKNLLEKLDNTYHPDYILIDARAGFHDMGGIAVAQIPHGAVLIGNGSKQSWDGMT QVIRTIAKGNTEEFSIMIVDSMCERATAERAIEQRKKFLNMAYTVCMENYYNEDQVMPGIDAEGVEHQPEYIPYDSELMQ GFELFSDGYNDSEIRVQAYRDLLTGSAYKDITKRIQSWFGE >Mature_441_residues MVDFNNTLESAVKSVLKWEEKQIITETTIIRDVQGKVSLFLKSEQKATESDISNLEEILQNDLNGFFTGKIFWEKCDKKD KLRIEIIKSIIEESREEWKTEDGVDFYICERPIAKKAWVNATQDVEPVWQYQEAECSNKAKVVTFYSFKGGMGRTTALAG IALNLIEQNKNVMMIDMDIEAPGLSTLFFDDIVVEKGLLDYLIERPLNEQCDIHDYVLEVTDPALLKENDGNLYLMPAGK VDETYLQKLARIDYQDNRENNLKSSIKNLLEKLDNTYHPDYILIDARAGFHDMGGIAVAQIPHGAVLIGNGSKQSWDGMT QVIRTIAKGNTEEFSIMIVDSMCERATAERAIEQRKKFLNMAYTVCMENYYNEDQVMPGIDAEGVEHQPEYIPYDSELMQ GFELFSDGYNDSEIRVQAYRDLLTGSAYKDITKRIQSWFGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50472; Mature: 50472
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDFNNTLESAVKSVLKWEEKQIITETTIIRDVQGKVSLFLKSEQKATESDISNLEEILQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHH NDLNGFFTGKIFWEKCDKKDKLRIEIIKSIIEESREEWKTEDGVDFYICERPIAKKAWVN HHCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHCC ATQDVEPVWQYQEAECSNKAKVVTFYSFKGGMGRTTALAGIALNLIEQNKNVMMIDMDIE CCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC APGLSTLFFDDIVVEKGLLDYLIERPLNEQCDIHDYVLEVTDPALLKENDGNLYLMPAGK CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHEEECCCCEEEEECCC VDETYLQKLARIDYQDNRENNLKSSIKNLLEKLDNTYHPDYILIDARAGFHDMGGIAVAQ CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEE IPHGAVLIGNGSKQSWDGMTQVIRTIAKGNTEEFSIMIVDSMCERATAERAIEQRKKFLN CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH MAYTVCMENYYNEDQVMPGIDAEGVEHQPEYIPYDSELMQGFELFSDGYNDSEIRVQAYR HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH DLLTGSAYKDITKRIQSWFGE HHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MVDFNNTLESAVKSVLKWEEKQIITETTIIRDVQGKVSLFLKSEQKATESDISNLEEILQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHH NDLNGFFTGKIFWEKCDKKDKLRIEIIKSIIEESREEWKTEDGVDFYICERPIAKKAWVN HHCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHCC ATQDVEPVWQYQEAECSNKAKVVTFYSFKGGMGRTTALAGIALNLIEQNKNVMMIDMDIE CCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC APGLSTLFFDDIVVEKGLLDYLIERPLNEQCDIHDYVLEVTDPALLKENDGNLYLMPAGK CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHEEECCCCEEEEECCC VDETYLQKLARIDYQDNRENNLKSSIKNLLEKLDNTYHPDYILIDARAGFHDMGGIAVAQ CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCEEEEE IPHGAVLIGNGSKQSWDGMTQVIRTIAKGNTEEFSIMIVDSMCERATAERAIEQRKKFLN CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH MAYTVCMENYYNEDQVMPGIDAEGVEHQPEYIPYDSELMQGFELFSDGYNDSEIRVQAYR HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH DLLTGSAYKDITKRIQSWFGE HHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA