| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925568
Identifier: 238925568
GI number: 238925568
Start: 3066693
End: 3068204
Strand: Reverse
Name: 238925568
Synonym: EUBREC_3224
Alternate gene names: NA
Gene position: 3068204-3066693 (Counterclockwise)
Preceding gene: 238925569
Following gene: 238925563
Centisome position: 88.94
GC content: 33.99
Gene sequence:
>1512_bases ATGAGTATGGATTTGCAAGAAAAAATAGAAATTTTACAACAGATAGGAAATTGTGTATCAGAAAACGGTGCCGCAGAAAA TGAAGAAAATGTATTGCAGAATTTTCTTCCATTACGAGATTATAATAAATTGGCTGAAGACAGAGTATTTCTTATTACAG GTGGGCGTGGAACAGGAAAGACAGAATTGTTTCGAATACTCACTTCCTGCAATGGCTTAAATTTTATAATTAATGAGTGT GATAAGAAAAGATTTCAAAATATTCAAAATGCCGAATTTATTATAGGATATATTGCAAGTGGAGATGGGGCAAAGCAGTT TCCGAGTCAAAGTATATGTTCTCGATGGATTGAAAATAAATCTTCGATGGATATAAATGTATTTTGGACGGGACTGGTAT GTGGGGTTGTTGTGAGAAAATATCATGATGTTCCGGAAATAATGAAACTGATGAATGAATATCTGGAATCTGAGTTAAAG GATATACTTCTTAAATCGAATAGTCAGCTATCCAAGTGGTGGGAGCTGGTGTTAGAGAAGGAAGAGACATGTATGACTTT TTTAGATGAGGTAGATGCTTATTTTCAGAAATGTGGCAAACATATTTATATTACTTATGATGAATTAGATAGAATATGTA GTAACTATAAAGATTTATTTGGATTTATAAAAGGCTTGTTGAATTTTTGGTATGAATATAATAATCGTTTTACAAACATA AAAGCGAAAATCTTTTTAAGAAGTGATCTTTATAATTCAAAGGCACTTCAATTTGTTGATGCATCAAAACTTAGAGCGTA CCATTTAGAACTGAAGTGGGATACGATATCTTTATATAGATTGCTGGTAAAACGTATTGCAAATTCTGGTTCAGAGGTTG CGTTAAGGTATTTGAGTGAAATACCGCAGCTTTTAAAGGAAAAAAGTGATGAACTTGGATGTTTACCATGTGATTCCGAG CAGGCATTACATGATTTTACTGACAAACTCATTGGCAAATACATGGGAAAAACACCTAAGAAAGGTAAAAGCTATTCGTG GGTTCCGAATCATATTCAGGATGCGAATGGAGAATTGACACCTAGACCGTTTTTGAAGTGTTTTTCGTTTGCTTCAAATG AAATGATTAAACATAGTGACGAATTAAATGATTTGAAAGAGGATCATTTATTGGTTCCAACATATCTGCAAGGTGCATTA GTAACGGTATCGGAAGACCGGGTCAAAGAACTTACAAGTGAGGAGTACCAATGGCTGACAGAATTGATTGATAGATTAAA AGGTAAGACAATGCTAATGGAAAAAGACGAGTTTTTAGAATATCTTACCCCCGATTTATGGTCAGAAGAAAAAAAAGATG AACTTCCAGGAAGAACAAAACAGGAGATATATAGTGTTTTATTGGCGTTGGGAATTATTATGGAAACATCGGATTCTAGG GTCAACGTTCCAGAAATATATCTGTACGGATTTGGTTTGAAGCGTAAAGGTGGTATACGAAGACCAAAGTAA
Upstream 100 bases:
>100_bases GATATAATGATAGTGAAATAAGGGTACAGGCATATAGAGATTTGTTGACAGGAAGTGCATATAAAGACATAACTAAGAGA ATACAGAGTTGGTTTGGTGA
Downstream 100 bases:
>100_bases ACGTATTCAAAGTGTTATATGAATAGTTTAAGAATTAATTATTTCAAACATTTCCTCCACCCTATGATTGTAAGTATGAT AAGCAGCAATTTTTTCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MSMDLQEKIEILQQIGNCVSENGAAENEENVLQNFLPLRDYNKLAEDRVFLITGGRGTGKTELFRILTSCNGLNFIINEC DKKRFQNIQNAEFIIGYIASGDGAKQFPSQSICSRWIENKSSMDINVFWTGLVCGVVVRKYHDVPEIMKLMNEYLESELK DILLKSNSQLSKWWELVLEKEETCMTFLDEVDAYFQKCGKHIYITYDELDRICSNYKDLFGFIKGLLNFWYEYNNRFTNI KAKIFLRSDLYNSKALQFVDASKLRAYHLELKWDTISLYRLLVKRIANSGSEVALRYLSEIPQLLKEKSDELGCLPCDSE QALHDFTDKLIGKYMGKTPKKGKSYSWVPNHIQDANGELTPRPFLKCFSFASNEMIKHSDELNDLKEDHLLVPTYLQGAL VTVSEDRVKELTSEEYQWLTELIDRLKGKTMLMEKDEFLEYLTPDLWSEEKKDELPGRTKQEIYSVLLALGIIMETSDSR VNVPEIYLYGFGLKRKGGIRRPK
Sequences:
>Translated_503_residues MSMDLQEKIEILQQIGNCVSENGAAENEENVLQNFLPLRDYNKLAEDRVFLITGGRGTGKTELFRILTSCNGLNFIINEC DKKRFQNIQNAEFIIGYIASGDGAKQFPSQSICSRWIENKSSMDINVFWTGLVCGVVVRKYHDVPEIMKLMNEYLESELK DILLKSNSQLSKWWELVLEKEETCMTFLDEVDAYFQKCGKHIYITYDELDRICSNYKDLFGFIKGLLNFWYEYNNRFTNI KAKIFLRSDLYNSKALQFVDASKLRAYHLELKWDTISLYRLLVKRIANSGSEVALRYLSEIPQLLKEKSDELGCLPCDSE QALHDFTDKLIGKYMGKTPKKGKSYSWVPNHIQDANGELTPRPFLKCFSFASNEMIKHSDELNDLKEDHLLVPTYLQGAL VTVSEDRVKELTSEEYQWLTELIDRLKGKTMLMEKDEFLEYLTPDLWSEEKKDELPGRTKQEIYSVLLALGIIMETSDSR VNVPEIYLYGFGLKRKGGIRRPK >Mature_502_residues SMDLQEKIEILQQIGNCVSENGAAENEENVLQNFLPLRDYNKLAEDRVFLITGGRGTGKTELFRILTSCNGLNFIINECD KKRFQNIQNAEFIIGYIASGDGAKQFPSQSICSRWIENKSSMDINVFWTGLVCGVVVRKYHDVPEIMKLMNEYLESELKD ILLKSNSQLSKWWELVLEKEETCMTFLDEVDAYFQKCGKHIYITYDELDRICSNYKDLFGFIKGLLNFWYEYNNRFTNIK AKIFLRSDLYNSKALQFVDASKLRAYHLELKWDTISLYRLLVKRIANSGSEVALRYLSEIPQLLKEKSDELGCLPCDSEQ ALHDFTDKLIGKYMGKTPKKGKSYSWVPNHIQDANGELTPRPFLKCFSFASNEMIKHSDELNDLKEDHLLVPTYLQGALV TVSEDRVKELTSEEYQWLTELIDRLKGKTMLMEKDEFLEYLTPDLWSEEKKDELPGRTKQEIYSVLLALGIIMETSDSRV NVPEIYLYGFGLKRKGGIRRPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58322; Mature: 58190
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMDLQEKIEILQQIGNCVSENGAAENEENVLQNFLPLRDYNKLAEDRVFLITGGRGTGK CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCH TELFRILTSCNGLNFIINECDKKRFQNIQNAEFIIGYIASGDGAKQFPSQSICSRWIENK HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHCCCHHHHHHHHCCC SSMDINVFWTGLVCGVVVRKYHDVPEIMKLMNEYLESELKDILLKSNSQLSKWWELVLEK CCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC EETCMTFLDEVDAYFQKCGKHIYITYDELDRICSNYKDLFGFIKGLLNFWYEYNNRFTNI HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE KAKIFLRSDLYNSKALQFVDASKLRAYHLELKWDTISLYRLLVKRIANSGSEVALRYLSE EEEEEEECCCCCCHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHH IPQLLKEKSDELGCLPCDSEQALHDFTDKLIGKYMGKTPKKGKSYSWVPNHIQDANGELT HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC PRPFLKCFSFASNEMIKHSDELNDLKEDHLLVPTYLQGALVTVSEDRVKELTSEEYQWLT CHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHCCEEEEECHHHHHHHHHHHHHHHH ELIDRLKGKTMLMEKDEFLEYLTPDLWSEEKKDELPGRTKQEIYSVLLALGIIMETSDSR HHHHHHCCCEEEECHHHHHHHHCCHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC VNVPEIYLYGFGLKRKGGIRRPK CCCCEEEEEECCEECCCCCCCCC >Mature Secondary Structure SMDLQEKIEILQQIGNCVSENGAAENEENVLQNFLPLRDYNKLAEDRVFLITGGRGTGK CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCH TELFRILTSCNGLNFIINECDKKRFQNIQNAEFIIGYIASGDGAKQFPSQSICSRWIENK HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHCCCHHHHHHHHCCC SSMDINVFWTGLVCGVVVRKYHDVPEIMKLMNEYLESELKDILLKSNSQLSKWWELVLEK CCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC EETCMTFLDEVDAYFQKCGKHIYITYDELDRICSNYKDLFGFIKGLLNFWYEYNNRFTNI HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE KAKIFLRSDLYNSKALQFVDASKLRAYHLELKWDTISLYRLLVKRIANSGSEVALRYLSE EEEEEEECCCCCCHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHH IPQLLKEKSDELGCLPCDSEQALHDFTDKLIGKYMGKTPKKGKSYSWVPNHIQDANGELT HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCC PRPFLKCFSFASNEMIKHSDELNDLKEDHLLVPTYLQGALVTVSEDRVKELTSEEYQWLT CHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHCCEEEEECHHHHHHHHHHHHHHHH ELIDRLKGKTMLMEKDEFLEYLTPDLWSEEKKDELPGRTKQEIYSVLLALGIIMETSDSR HHHHHHCCCEEEECHHHHHHHHCCHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC VNVPEIYLYGFGLKRKGGIRRPK CCCCEEEEEECCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA