| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925521
Identifier: 238925521
GI number: 238925521
Start: 3027426
End: 3029027
Strand: Reverse
Name: 238925521
Synonym: EUBREC_3177
Alternate gene names: NA
Gene position: 3029027-3027426 (Counterclockwise)
Preceding gene: 238925522
Following gene: 238925520
Centisome position: 87.81
GC content: 47.44
Gene sequence:
>1602_bases ATGTCAAATGAGGTAAACTATATGCAGCAGCGAATTACCATAAATCTTAACACAGATAGCAAAACAACCGACAAAACCAC TATTCTTGAATACTGCCGCAGTCACGGCATTGCAGGGATAGAAACACCGTGCGGTGGAAAAGGAACCTGCGGCAAGTGCA AGGTGACGGTGGCAAAACCATACTATAAGGACGTGCTGGCCTGTCAGACGAAGATTTGTGACGGTATGGAAATTATTGTT GGAAGAAAAGAAAGCACCGGAACCAAAGAAGACAGCATGGTTGTTCTGACAAATGGAGAAAATGTATCGGAAAAATTTAA TGAGCATGTGAATAGGAATGTTGAAGACACTCTGGCGGCCTGTGATATCGGAACCACAACAGTAGTCTGTTATCTGATTG ATAAAGAGACCGGGCAGATTATCTCAACCAGAAGCGGTGCCAATCCACAGCGCAGCTTTGGAGCAGATGTACTTTCCAGA ATTGATGCGGCAGCGAGGGCGGATGATAACGATAAAGCGAATGGCGGCCTGCAGATGATGCAGACACAGATAGTGTCCCT GCTTAACGGCTGGATATCAGAAATGCTCACGGAATGTGGCAGAACTAAAGTAAGCCGGTTTTCAGTTGCCGGAAACACAG TTATGTGTCATCTGCTTATGGGAATTTCACCGGAAAAGCTTGGCAAGGCACCGTTTATGCCGGATGAATATTTTGGCAGG GAATTTAATCCTTTGGATATAGGACTTGAGAATTGTCAAACCATGATTATATTTCCGGCTGTATCAGGCTTTGTAGGCGG AGATATTACAGCGGGTATGATGGAGACAGTGAACTGCAACGAGCTGACGCTATATCTGGATATCGGAACAAACGGTGAGA TGGCGCTTGGAAAAGGCGACAGATATGTGTGCTGTGCCACCGCGGCAGGACCGGCTTTTGAGGGTGCGCAGATTGAGCTG GGCATGCCGGCGGCTAAGGGAGCCGTGGATAAGGTATGGCTGGAAGGGCGCAGAATTAAGTATTCGGTTATCGGAAATGA CAGACCTGTTGGACTGTGTGGTTCGGGGCTTATCGATGCGCTTGCCGTTCTTCTGAAAGCCGGAATCATAGATGAAAACG GCACGATTTTAAGCGGACAGGAGCTTCCTATACTGTTTAGGTCGTATGTGTTTGAGGTGGAAGCGGAGGAGACTGCACAG AGCACAGAGTCCTCTCTCGCCGTTCATATTGCACCTGGAGTCTACATTACGCAGGAGGATATCAGGAAGCTGCAGCTTGC GAAGGGCGCGATAGCCGCCGGAATAGAAGTATTGTTTAAGGAATATGGCTGTACGCCTTGTAATATTGATGTTCTCACAT TTGCAGGAGGCTTTGGAAACTACATTGACAAAGCAAGTGCGGCTGCAATAGGATTGTTTCCACAGGAGCTTTTGGACAAG GCAAAAGAAGTGGGAAATGCGGCAGGAAACGGAGCTGTTTCGGCAGCTTTATCGCAGGAAGCCTGGGAAAGAGCACTGGA GATAAGCGGGAACATGCGTTACATCGAGCTGGCATCGTATCCGCATTTCAATGAAATGTATGTGGAGCATATGAATTTTT AA
Upstream 100 bases:
>100_bases TTATGGATTAACGAAGACCCGGACGTTTGTCCGGGTTTTTGTATTAAAGTATATATAAATATGCTATCATACAAACAAAG AAAAAAGCCATAATAGTACA
Downstream 100 bases:
>100_bases ATAATTGAAAAATATATATTTTTACTTTATTGTTGAACAAAATTGTCATATAATGACTTCGGGTGAGATTATATTTTTAA AAGAAAAGCTGATAGGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Electron Transfer Protein; Vitamin; Corrinoid Activation/Regeneration Protein; Iron-Sulfur Protein; Ferredoxin-Containing Protein; Flavoprotein; ATP Synthase F0 A Subunit; Activating; Ferredoxin Domain-Containing Protein; Methylamine Methyltransferase Corrinoid Activation Protein
Number of amino acids: Translated: 533; Mature: 532
Protein sequence:
>533_residues MSNEVNYMQQRITINLNTDSKTTDKTTILEYCRSHGIAGIETPCGGKGTCGKCKVTVAKPYYKDVLACQTKICDGMEIIV GRKESTGTKEDSMVVLTNGENVSEKFNEHVNRNVEDTLAACDIGTTTVVCYLIDKETGQIISTRSGANPQRSFGADVLSR IDAAARADDNDKANGGLQMMQTQIVSLLNGWISEMLTECGRTKVSRFSVAGNTVMCHLLMGISPEKLGKAPFMPDEYFGR EFNPLDIGLENCQTMIIFPAVSGFVGGDITAGMMETVNCNELTLYLDIGTNGEMALGKGDRYVCCATAAGPAFEGAQIEL GMPAAKGAVDKVWLEGRRIKYSVIGNDRPVGLCGSGLIDALAVLLKAGIIDENGTILSGQELPILFRSYVFEVEAEETAQ STESSLAVHIAPGVYITQEDIRKLQLAKGAIAAGIEVLFKEYGCTPCNIDVLTFAGGFGNYIDKASAAAIGLFPQELLDK AKEVGNAAGNGAVSAALSQEAWERALEISGNMRYIELASYPHFNEMYVEHMNF
Sequences:
>Translated_533_residues MSNEVNYMQQRITINLNTDSKTTDKTTILEYCRSHGIAGIETPCGGKGTCGKCKVTVAKPYYKDVLACQTKICDGMEIIV GRKESTGTKEDSMVVLTNGENVSEKFNEHVNRNVEDTLAACDIGTTTVVCYLIDKETGQIISTRSGANPQRSFGADVLSR IDAAARADDNDKANGGLQMMQTQIVSLLNGWISEMLTECGRTKVSRFSVAGNTVMCHLLMGISPEKLGKAPFMPDEYFGR EFNPLDIGLENCQTMIIFPAVSGFVGGDITAGMMETVNCNELTLYLDIGTNGEMALGKGDRYVCCATAAGPAFEGAQIEL GMPAAKGAVDKVWLEGRRIKYSVIGNDRPVGLCGSGLIDALAVLLKAGIIDENGTILSGQELPILFRSYVFEVEAEETAQ STESSLAVHIAPGVYITQEDIRKLQLAKGAIAAGIEVLFKEYGCTPCNIDVLTFAGGFGNYIDKASAAAIGLFPQELLDK AKEVGNAAGNGAVSAALSQEAWERALEISGNMRYIELASYPHFNEMYVEHMNF >Mature_532_residues SNEVNYMQQRITINLNTDSKTTDKTTILEYCRSHGIAGIETPCGGKGTCGKCKVTVAKPYYKDVLACQTKICDGMEIIVG RKESTGTKEDSMVVLTNGENVSEKFNEHVNRNVEDTLAACDIGTTTVVCYLIDKETGQIISTRSGANPQRSFGADVLSRI DAAARADDNDKANGGLQMMQTQIVSLLNGWISEMLTECGRTKVSRFSVAGNTVMCHLLMGISPEKLGKAPFMPDEYFGRE FNPLDIGLENCQTMIIFPAVSGFVGGDITAGMMETVNCNELTLYLDIGTNGEMALGKGDRYVCCATAAGPAFEGAQIELG MPAAKGAVDKVWLEGRRIKYSVIGNDRPVGLCGSGLIDALAVLLKAGIIDENGTILSGQELPILFRSYVFEVEAEETAQS TESSLAVHIAPGVYITQEDIRKLQLAKGAIAAGIEVLFKEYGCTPCNIDVLTFAGGFGNYIDKASAAAIGLFPQELLDKA KEVGNAAGNGAVSAALSQEAWERALEISGNMRYIELASYPHFNEMYVEHMNF
Specific function: Unknown
COG id: COG3894
COG function: function code R; Uncharacterized metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57332; Mature: 57201
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNEVNYMQQRITINLNTDSKTTDKTTILEYCRSHGIAGIETPCGGKGTCGKCKVTVAKP CCCHHCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECH YYKDVLACQTKICDGMEIIVGRKESTGTKEDSMVVLTNGENVSEKFNEHVNRNVEDTLAA HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHH CDIGTTTVVCYLIDKETGQIISTRSGANPQRSFGADVLSRIDAAARADDNDKANGGLQMM CCCCCEEEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH QTQIVSLLNGWISEMLTECGRTKVSRFSVAGNTVMCHLLMGISPEKLGKAPFMPDEYFGR HHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCEEHHHHHCCCHHHHCCCCCCCHHHHCC EFNPLDIGLENCQTMIIFPAVSGFVGGDITAGMMETVNCNELTLYLDIGTNGEMALGKGD CCCCHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCEEECCCC RYVCCATAAGPAFEGAQIELGMPAAKGAVDKVWLEGRRIKYSVIGNDRPVGLCGSGLIDA EEEEEEECCCCCCCCCEEEECCCCCCCCHHHHEECCCEEEEEEECCCCCCCCCCCHHHHH LAVLLKAGIIDENGTILSGQELPILFRSYVFEVEAEETAQSTESSLAVHIAPGVYITQED HHHHHHCCCCCCCCCEECCCCCHHEEEHHHEEECCHHHHHHHCCCEEEEECCCEEEEHHH IRKLQLAKGAIAAGIEVLFKEYGCTPCNIDVLTFAGGFGNYIDKASAAAIGLFPQELLDK HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHEECCCHHHHHHH AKEVGNAAGNGAVSAALSQEAWERALEISGNMRYIELASYPHFNEMYVEHMNF HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCC >Mature Secondary Structure SNEVNYMQQRITINLNTDSKTTDKTTILEYCRSHGIAGIETPCGGKGTCGKCKVTVAKP CCHHCEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECH YYKDVLACQTKICDGMEIIVGRKESTGTKEDSMVVLTNGENVSEKFNEHVNRNVEDTLAA HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHH CDIGTTTVVCYLIDKETGQIISTRSGANPQRSFGADVLSRIDAAARADDNDKANGGLQMM CCCCCEEEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH QTQIVSLLNGWISEMLTECGRTKVSRFSVAGNTVMCHLLMGISPEKLGKAPFMPDEYFGR HHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCEEHHHHHCCCHHHHCCCCCCCHHHHCC EFNPLDIGLENCQTMIIFPAVSGFVGGDITAGMMETVNCNELTLYLDIGTNGEMALGKGD CCCCHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCEEEEEEEECCCCCEEECCCC RYVCCATAAGPAFEGAQIELGMPAAKGAVDKVWLEGRRIKYSVIGNDRPVGLCGSGLIDA EEEEEEECCCCCCCCCEEEECCCCCCCCHHHHEECCCEEEEEEECCCCCCCCCCCHHHHH LAVLLKAGIIDENGTILSGQELPILFRSYVFEVEAEETAQSTESSLAVHIAPGVYITQED HHHHHHCCCCCCCCCEECCCCCHHEEEHHHEEECCHHHHHHHCCCEEEEECCCEEEEHHH IRKLQLAKGAIAAGIEVLFKEYGCTPCNIDVLTFAGGFGNYIDKASAAAIGLFPQELLDK HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHEECCCHHHHHHH AKEVGNAAGNGAVSAALSQEAWERALEISGNMRYIELASYPHFNEMYVEHMNF HHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA