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The map label for this gene is cpsC [H]

Identifier: 238925470

GI number: 238925470

Start: 2981047

End: 2981835

Strand: Reverse

Name: cpsC [H]

Synonym: EUBREC_3125

Alternate gene names: 238925470

Gene position: 2981835-2981047 (Counterclockwise)

Preceding gene: 238925471

Following gene: 238925469

Centisome position: 86.44

GC content: 45.12

Gene sequence:

>789_bases
ATGCGGGGATACGTAATGGAGAGAGAACAGGATTTTGACAACGAGATAGAGATAGACTTAAAGGATCTGTTTCTTGAGAT
AATTTCATATTGGCAGTGGATAATTCTTGTTACGATAGCAACAGGTGCAGTGGCATTTGCGATAAGCAGATTTATGATTA
CACCTATGTATGAATCTACATCTGAGCTCTATGTACTTTCAAAGAGCACATCCATCACAAGCCTTGCGGATATCCAGACA
GGCACCAGCCTGACAAATGATTACATAGTTGTAGTAAAGGGACGTCCGGTGCTGGATCAGGTCATAGAAAATCTGAATCT
GAATGAGAGCTACAAGACACTTGGCGGCAGGGTGACGCTTGATAATCCGTCCAACTCGCGAGTACTCAATATCACAGTAA
CGGATCCCGATCCGCAGATGGCAAAGACCATAGCAGATGAGATAGCAAAGGTCGCATCGGCATATATAGCGGAGAAGATG
AAGCAGGATCCGCCGACCATCATCCAGAGCGGATATGATGATGGAGGCGCGGTAAGCCCTAATATCGGCAAAAACACAGT
GATAGGAGCCTTTGCGGGAGCATTTCTGTCGATAGCGGTTATAGTGGTTTCTTATCTGTTCAATGATACAATCATAGATA
CAGAGGATGTGGAGAAGAAGCTTGGCATGAACGTGCTTGGTACACTTCCGCTTGATGAGGCGGAGGATGATGGCGAGCAT
GGAAAGGGTAGAAAACATAGCAGAGGCAGCCACAGAAAGAAAAGAAAAAAGAAATCGGCTTCAGCATAA

Upstream 100 bases:

>100_bases
ATGCTATGAGTACGTGGCAAAGAAGTTCGGTGATGACTACGCGCAGGAAATCATGCAGACCACACCGGAAAATATAATAA
ACGGAAGATAATAAGTGTAA

Downstream 100 bases:

>100_bases
GGAAGCCTGTATCAGGAGATGGGCAGATGGAATTAGTAAAATTTGGCAAGCTAAAAGAACAAAGCTATACGATGAAGGAA
TCACTTCGAGCTTTGAAGAC

Product: capsular exopolysaccharide family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MRGYVMEREQDFDNEIEIDLKDLFLEIISYWQWIILVTIATGAVAFAISRFMITPMYESTSELYVLSKSTSITSLADIQT
GTSLTNDYIVVVKGRPVLDQVIENLNLNESYKTLGGRVTLDNPSNSRVLNITVTDPDPQMAKTIADEIAKVASAYIAEKM
KQDPPTIIQSGYDDGGAVSPNIGKNTVIGAFAGAFLSIAVIVVSYLFNDTIIDTEDVEKKLGMNVLGTLPLDEAEDDGEH
GKGRKHSRGSHRKKRKKKSASA

Sequences:

>Translated_262_residues
MRGYVMEREQDFDNEIEIDLKDLFLEIISYWQWIILVTIATGAVAFAISRFMITPMYESTSELYVLSKSTSITSLADIQT
GTSLTNDYIVVVKGRPVLDQVIENLNLNESYKTLGGRVTLDNPSNSRVLNITVTDPDPQMAKTIADEIAKVASAYIAEKM
KQDPPTIIQSGYDDGGAVSPNIGKNTVIGAFAGAFLSIAVIVVSYLFNDTIIDTEDVEKKLGMNVLGTLPLDEAEDDGEH
GKGRKHSRGSHRKKRKKKSASA
>Mature_262_residues
MRGYVMEREQDFDNEIEIDLKDLFLEIISYWQWIILVTIATGAVAFAISRFMITPMYESTSELYVLSKSTSITSLADIQT
GTSLTNDYIVVVKGRPVLDQVIENLNLNESYKTLGGRVTLDNPSNSRVLNITVTDPDPQMAKTIADEIAKVASAYIAEKM
KQDPPTIIQSGYDDGGAVSPNIGKNTVIGAFAGAFLSIAVIVVSYLFNDTIIDTEDVEKKLGMNVLGTLPLDEAEDDGEH
GKGRKHSRGSHRKKRKKKSASA

Specific function: Required for CpsD phosphorylation. Involved in the regulation of capsular polysaccharide biosynthesis. May be part of a complex that directs the coordinated polymerization and export to the cell surface of the capsular polysaccharide [H]

COG id: COG3944

COG function: function code M; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsC/CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856
- InterPro:   IPR005701 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 28798; Mature: 28798

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGYVMEREQDFDNEIEIDLKDLFLEIISYWQWIILVTIATGAVAFAISRFMITPMYEST
CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SELYVLSKSTSITSLADIQTGTSLTNDYIVVVKGRPVLDQVIENLNLNESYKTLGGRVTL
CEEEEEECCCCCHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCHHHHCCCEEEE
DNPSNSRVLNITVTDPDPQMAKTIADEIAKVASAYIAEKMKQDPPTIIQSGYDDGGAVSP
CCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
NIGKNTVIGAFAGAFLSIAVIVVSYLFNDTIIDTEDVEKKLGMNVLGTLPLDEAEDDGEH
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCC
GKGRKHSRGSHRKKRKKKSASA
CCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MRGYVMEREQDFDNEIEIDLKDLFLEIISYWQWIILVTIATGAVAFAISRFMITPMYEST
CCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SELYVLSKSTSITSLADIQTGTSLTNDYIVVVKGRPVLDQVIENLNLNESYKTLGGRVTL
CEEEEEECCCCCHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCHHHHCCCEEEE
DNPSNSRVLNITVTDPDPQMAKTIADEIAKVASAYIAEKMKQDPPTIIQSGYDDGGAVSP
CCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
NIGKNTVIGAFAGAFLSIAVIVVSYLFNDTIIDTEDVEKKLGMNVLGTLPLDEAEDDGEH
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEECCCCCCCCCCCCC
GKGRKHSRGSHRKKRKKKSASA
CCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11463916 [H]