Click here to switch to the map view.

The map label for this gene is yoaR [H]

Identifier: 238925351

GI number: 238925351

Start: 2883760

End: 2885397

Strand: Reverse

Name: yoaR [H]

Synonym: EUBREC_3006

Alternate gene names: 238925351

Gene position: 2885397-2883760 (Counterclockwise)

Preceding gene: 238925353

Following gene: 238925350

Centisome position: 83.64

GC content: 49.39

Gene sequence:

>1638_bases
ATGAAGATTAATAAAAAAGCATTATTACTGGGTACAATGGCATTTGTGCTTGTGGCAGCATCAGGCATGGTAAGTGCATA
TGCAAGCGGTTCGTCAGGCACAAAGAAGGCAAAGGTACAGACAATTACAGAGGGTGTGTGCATTGGCAGTGTGGATGTAG
GCGGTATGACAAAGGAAGAAGCAAAAAAAGCAGTTGATGCCTATGTTGACAGCATAAAGGATACATCCTTTTCATTAAAG
GGCGCCAATGGTTCCTTTGATGCAACAGCACAGGAAATGTCTGTTTCGGCGGACAGTGATGCAGCGGTGGATGAGGCTCT
TTCAGTGTGCCATGAGGGCAGCCTGATTGACAGATTTGTGGAGTCAGAGGAGCTCAAAAAGGGCAATGTTGCCGTCAAGA
TGTATCTGTCGGTTGATAAACAAAAGACTGCAAATATGATTTATGATAAGAGCGACGAGCTCAATATAAAGGCAGTTGAC
AATTCGCTGCAGAGAAACGGCGACAGCTTCGATTTTGTTCCGGGACAGGAAGGCAAAGAGGTCGATGTGGTAAAATCAGT
CTATGCTATAAATGACTTTTTGCAGAATAGCTGGGATGGCTCGGCGAATGAGATAGAGCTGGTCACAAATACGGTTCAGC
CGAGGGGTTCAAAGGAAGAGCTCTCAAAGATTAAGGATAATCTGGGAGGCTTTTCTACCGATTTCAGCAGCTCGGCAGCA
GGGCGTGCAACCAATGTAAAGAACGCATGCAGCCTGATAAACGGCAGTGTCATATATCCGGGGGAGCAGTTCTCGGTTTA
CGAGGCTATCAGCCCTATCACAACTGACAACGGCTATCAGATAGCAGGCGCATACGAGAACGGTCAGGTAGTTGACTCGG
TAGGTGGAGGTGTGTGTCAGGTTGCGACCACTCTCTACAATGCGGTTATAAGGGCTGAGCTTGAGATAGTGCAGCGCTAC
AACCATTCCATGATAGTAAGCTACGTAAAGCCATCTGACGATGCGGCAATCGCAGGTACCTACAAGGATCTTAAGTTTAA
AAATAATCTGGACAATCCGGTGTATATAGAGGGCTATTGCAGTGGAGGAATTATTACCTTCAATGTGTACGGAGTGGAGA
CGAGACCCGCAAACAGGGAAATTTCCTTCAGGAGTGAGACACTTTCCGAGGAGGATCCGGTCACGCAGTTTAATTTTGAT
GCAGGTCAGCCGGTCGGTTATTTCAACACCGAGCAGTCTGCACACAAGGGAGTGACCGCAAGGCTATGGAAGACGGTCAC
AGTTGATGGAACAGTGCAGAGCGATGAGGTATTCAACAACAGCAAGTACAAGTCATCACCGAAAATCGTGACGGTTGGTA
CAGCAGGAGCATCAGCGGAGGTTGTTGCGCAGCTTCAGGCGGCGGCAGCGGCTAATGATGAGGGCTCGGTTAAATCCATT
GCTGCGTCTGCGGCAGCAGCGGCTCAGGCAGCACAGGCTCAGGCAACCCAGACACAGGATCCAAACGCGGCAGCTCAGAC
ACAGAGCGCGCAGACACAGACTACAGATCCGAATGCAGCAGGGCAGACACAAGGTGCTCAGACACAGCTGACAGACCAGA
ATGCGGCAGGACAGGCACAGGGAGCACAGACGCAGTAA

Upstream 100 bases:

>100_bases
TCTTGAAATATGGAAAAAATATGATAATATGATATAAAATGCAGTTCAGTTAAGCGGATGACAGGGGCGCTTTTAACAGC
CTCAGGAAAAGGAATCGGAA

Downstream 100 bases:

>100_bases
ATGCCCGCAGGTAGTTGTTTCTGATGTAGTTATTTGCAATCAATGCACCGGGCTGCAACAGTATACAAAACATATTATTA
TTAGGAACAGGAAAACACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MKINKKALLLGTMAFVLVAASGMVSAYASGSSGTKKAKVQTITEGVCIGSVDVGGMTKEEAKKAVDAYVDSIKDTSFSLK
GANGSFDATAQEMSVSADSDAAVDEALSVCHEGSLIDRFVESEELKKGNVAVKMYLSVDKQKTANMIYDKSDELNIKAVD
NSLQRNGDSFDFVPGQEGKEVDVVKSVYAINDFLQNSWDGSANEIELVTNTVQPRGSKEELSKIKDNLGGFSTDFSSSAA
GRATNVKNACSLINGSVIYPGEQFSVYEAISPITTDNGYQIAGAYENGQVVDSVGGGVCQVATTLYNAVIRAELEIVQRY
NHSMIVSYVKPSDDAAIAGTYKDLKFKNNLDNPVYIEGYCSGGIITFNVYGVETRPANREISFRSETLSEEDPVTQFNFD
AGQPVGYFNTEQSAHKGVTARLWKTVTVDGTVQSDEVFNNSKYKSSPKIVTVGTAGASAEVVAQLQAAAAANDEGSVKSI
AASAAAAAQAAQAQATQTQDPNAAAQTQSAQTQTTDPNAAGQTQGAQTQLTDQNAAGQAQGAQTQ

Sequences:

>Translated_545_residues
MKINKKALLLGTMAFVLVAASGMVSAYASGSSGTKKAKVQTITEGVCIGSVDVGGMTKEEAKKAVDAYVDSIKDTSFSLK
GANGSFDATAQEMSVSADSDAAVDEALSVCHEGSLIDRFVESEELKKGNVAVKMYLSVDKQKTANMIYDKSDELNIKAVD
NSLQRNGDSFDFVPGQEGKEVDVVKSVYAINDFLQNSWDGSANEIELVTNTVQPRGSKEELSKIKDNLGGFSTDFSSSAA
GRATNVKNACSLINGSVIYPGEQFSVYEAISPITTDNGYQIAGAYENGQVVDSVGGGVCQVATTLYNAVIRAELEIVQRY
NHSMIVSYVKPSDDAAIAGTYKDLKFKNNLDNPVYIEGYCSGGIITFNVYGVETRPANREISFRSETLSEEDPVTQFNFD
AGQPVGYFNTEQSAHKGVTARLWKTVTVDGTVQSDEVFNNSKYKSSPKIVTVGTAGASAEVVAQLQAAAAANDEGSVKSI
AASAAAAAQAAQAQATQTQDPNAAAQTQSAQTQTTDPNAAGQTQGAQTQLTDQNAAGQAQGAQTQ
>Mature_545_residues
MKINKKALLLGTMAFVLVAASGMVSAYASGSSGTKKAKVQTITEGVCIGSVDVGGMTKEEAKKAVDAYVDSIKDTSFSLK
GANGSFDATAQEMSVSADSDAAVDEALSVCHEGSLIDRFVESEELKKGNVAVKMYLSVDKQKTANMIYDKSDELNIKAVD
NSLQRNGDSFDFVPGQEGKEVDVVKSVYAINDFLQNSWDGSANEIELVTNTVQPRGSKEELSKIKDNLGGFSTDFSSSAA
GRATNVKNACSLINGSVIYPGEQFSVYEAISPITTDNGYQIAGAYENGQVVDSVGGGVCQVATTLYNAVIRAELEIVQRY
NHSMIVSYVKPSDDAAIAGTYKDLKFKNNLDNPVYIEGYCSGGIITFNVYGVETRPANREISFRSETLSEEDPVTQFNFD
AGQPVGYFNTEQSAHKGVTARLWKTVTVDGTVQSDEVFNNSKYKSSPKIVTVGTAGASAEVVAQLQAAAAANDEGSVKSI
AASAAAAAQAAQAQATQTQDPNAAAQTQSAQTQTTDPNAAGQTQGAQTQLTDQNAAGQAQGAQTQ

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 57441; Mature: 57441

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINKKALLLGTMAFVLVAASGMVSAYASGSSGTKKAKVQTITEGVCIGSVDVGGMTKEE
CCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCEEEECCCCCCCCHHH
AKKAVDAYVDSIKDTSFSLKGANGSFDATAQEMSVSADSDAAVDEALSVCHEGSLIDRFV
HHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH
ESEELKKGNVAVKMYLSVDKQKTANMIYDKSDELNIKAVDNSLQRNGDSFDFVPGQEGKE
HHHHHCCCCEEEEEEEECCCHHHHHHHCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCCC
VDVVKSVYAINDFLQNSWDGSANEIELVTNTVQPRGSKEELSKIKDNLGGFSTDFSSSAA
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
GRATNVKNACSLINGSVIYPGEQFSVYEAISPITTDNGYQIAGAYENGQVVDSVGGGVCQ
CCCCCHHHHHHHHCCCEECCCCCCCHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCHHH
VATTLYNAVIRAELEIVQRYNHSMIVSYVKPSDDAAIAGTYKDLKFKNNLDNPVYIEGYC
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECHHHCEECCCCCCCEEEEEEE
SGGIITFNVYGVETRPANREISFRSETLSEEDPVTQFNFDAGQPVGYFNTEQSAHKGVTA
CCCEEEEEEEEEECCCCCCCEEECHHCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCEE
RLWKTVTVDGTVQSDEVFNNSKYKSSPKIVTVGTAGASAEVVAQLQAAAAANDEGSVKSI
EEEEEEEECCCCCCCHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHH
AASAAAAAQAAQAQATQTQDPNAAAQTQSAQTQTTDPNAAGQTQGAQTQLTDQNAAGQAQ
HHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
GAQTQ
CCCCC
>Mature Secondary Structure
MKINKKALLLGTMAFVLVAASGMVSAYASGSSGTKKAKVQTITEGVCIGSVDVGGMTKEE
CCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCEEEECCCCCCCCHHH
AKKAVDAYVDSIKDTSFSLKGANGSFDATAQEMSVSADSDAAVDEALSVCHEGSLIDRFV
HHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHH
ESEELKKGNVAVKMYLSVDKQKTANMIYDKSDELNIKAVDNSLQRNGDSFDFVPGQEGKE
HHHHHCCCCEEEEEEEECCCHHHHHHHCCCCCCEEEEEECCHHHCCCCCCCCCCCCCCCC
VDVVKSVYAINDFLQNSWDGSANEIELVTNTVQPRGSKEELSKIKDNLGGFSTDFSSSAA
HHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
GRATNVKNACSLINGSVIYPGEQFSVYEAISPITTDNGYQIAGAYENGQVVDSVGGGVCQ
CCCCCHHHHHHHHCCCEECCCCCCCHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCHHH
VATTLYNAVIRAELEIVQRYNHSMIVSYVKPSDDAAIAGTYKDLKFKNNLDNPVYIEGYC
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEECHHHCEECCCCCCCEEEEEEE
SGGIITFNVYGVETRPANREISFRSETLSEEDPVTQFNFDAGQPVGYFNTEQSAHKGVTA
CCCEEEEEEEEEECCCCCCCEEECHHCCCCCCCCEEEECCCCCCCCCCCCCHHHHCCCEE
RLWKTVTVDGTVQSDEVFNNSKYKSSPKIVTVGTAGASAEVVAQLQAAAAANDEGSVKSI
EEEEEEEECCCCCCCHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHH
AASAAAAAQAAQAQATQTQDPNAAAQTQSAQTQTTDPNAAGQTQGAQTQLTDQNAAGQAQ
HHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
GAQTQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]