Definition Eubacterium rectale ATCC 33656, complete genome.
Accession NC_012781
Length 3,449,685

Click here to switch to the map view.

The map label for this gene is 238925268

Identifier: 238925268

GI number: 238925268

Start: 2803919

End: 2805052

Strand: Reverse

Name: 238925268

Synonym: EUBREC_2922

Alternate gene names: NA

Gene position: 2805052-2803919 (Counterclockwise)

Preceding gene: 238925269

Following gene: 238925267

Centisome position: 81.31

GC content: 48.06

Gene sequence:

>1134_bases
ATGAACATATGGCTAAAGTTAAGGAAAACAGCTGCAATTACACTATGTGAATTACTTGCAATTGCTACAATTTTTACAGG
CTGTGCCTCCGCTGATTTATCCGGCACTGAAGGTGCCGGGCATGCCGCAGGAGCTGTAGTGGCAGGTGAGGATTCTTCCG
GTGCTTTAGGCAGCAAGGATAACGCGGATGGGCCACAGGAGGATCTTGTAAACAACAATTCCTACGTTTCCATCGATGCT
ATTCCGGCATATGATGGCAAGGCATATGTGGCTGTCAACAATAATGAGCCTTTTTTTACGGACAGCGATATGACTACCAC
TGCTTTTGAAAATTACAGTGATTTGGATTCACTTGGCAGATGCGGTGTGGCTTATGCCAATATCTGCAGAGATATCATGC
CGACTGAGGAGCGTGGCAAGATAGGCATGATAAAGCCATCAGGCTGGCATACGGTGAAGTATGATGTGATAAAGGACAGG
TATTTATATAATCGCTGTCATCTTATTGGCTATCAGCTTGCCGGCGAGAATGCCAATCCGAAGAATCTTATTACCGGTAC
GAGATACCTGAATGTGGAGGGCATGCTGCCGTTTGAGAATCTGGTAGCGGATTATGTAAACAATACAGGAAATCATGTGC
TTTACAGAGTGACTCCGATGTTCTCGGGCAGCAATCTAGTTGCAAACGGCGTTCTCATAGAGGCAAAGTCGGTTGAGGAT
AACGGTGGCGGCATACTTTTTAATGTATATTGCTATAATGTGCAGCCCGGAGTCGGAATAAACTATGAGAATGGTGACAG
CTGGCTGGATGGCACCACTCCGCAGAAGCAGAGCGCTCAGACGGATACACCGCAGAATGAAGGTTCGCAGAGCAGCGCTG
GAAGCGGGGCAGGAGAATCCGGCTCTTCAGGCAGTACAACAGGAAGTGCATCATCAGGTTCAGACAGCTCAGCAGCAGAA
AATAGCGCTGCAGATTCCTCAAACAGCGAGACTATGGTTCATATCACAGCAACCGGCAAGAAATATCACCGTGCGGGCTG
TCGGACCTTGAAAAAGAGTGACACAGAGGTAACGCTTGATGAAGCAAAATCCATGGGCTTGTCACCGTGCGGCATCTGCA
ATCCGCCACAGTAG

Upstream 100 bases:

>100_bases
AAATAAAAGTATATTAGGTTTAGTAATTTAAGTATTTATTTAATTTATTGTAATTAGGGAAAATCCAATATCAATCGATT
GATAGAAAGAGTGATTTTAT

Downstream 100 bases:

>100_bases
ATGTGCATTAGCATTTGCAATCCGCCACAGTAGATGTGCATTAGCATTTGTAATTCACCGCAGTAGATGTGCATTAGCAT
TTGCAATCCACCTCAGTAGA

Product: extracellular/cell surface DNA-entry nuclease precursor

Products: NA

Alternate protein names: Prophage Lp1 Protein; DNA Nuclease; Endonuclease; DNA/RNA Non-Specific Endonuclease; Extracellular/Cell Surface DNA-Entry Nuclease; Membrane Nuclease; DNA-Entry Nuclease EndA; Deoxyribonuclease; DTDP-D-Glucose 4 6-Dehydratase; StreptodoRNAse; Prophage Nuclease

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MNIWLKLRKTAAITLCELLAIATIFTGCASADLSGTEGAGHAAGAVVAGEDSSGALGSKDNADGPQEDLVNNNSYVSIDA
IPAYDGKAYVAVNNNEPFFTDSDMTTTAFENYSDLDSLGRCGVAYANICRDIMPTEERGKIGMIKPSGWHTVKYDVIKDR
YLYNRCHLIGYQLAGENANPKNLITGTRYLNVEGMLPFENLVADYVNNTGNHVLYRVTPMFSGSNLVANGVLIEAKSVED
NGGGILFNVYCYNVQPGVGINYENGDSWLDGTTPQKQSAQTDTPQNEGSQSSAGSGAGESGSSGSTTGSASSGSDSSAAE
NSAADSSNSETMVHITATGKKYHRAGCRTLKKSDTEVTLDEAKSMGLSPCGICNPPQ

Sequences:

>Translated_377_residues
MNIWLKLRKTAAITLCELLAIATIFTGCASADLSGTEGAGHAAGAVVAGEDSSGALGSKDNADGPQEDLVNNNSYVSIDA
IPAYDGKAYVAVNNNEPFFTDSDMTTTAFENYSDLDSLGRCGVAYANICRDIMPTEERGKIGMIKPSGWHTVKYDVIKDR
YLYNRCHLIGYQLAGENANPKNLITGTRYLNVEGMLPFENLVADYVNNTGNHVLYRVTPMFSGSNLVANGVLIEAKSVED
NGGGILFNVYCYNVQPGVGINYENGDSWLDGTTPQKQSAQTDTPQNEGSQSSAGSGAGESGSSGSTTGSASSGSDSSAAE
NSAADSSNSETMVHITATGKKYHRAGCRTLKKSDTEVTLDEAKSMGLSPCGICNPPQ
>Mature_377_residues
MNIWLKLRKTAAITLCELLAIATIFTGCASADLSGTEGAGHAAGAVVAGEDSSGALGSKDNADGPQEDLVNNNSYVSIDA
IPAYDGKAYVAVNNNEPFFTDSDMTTTAFENYSDLDSLGRCGVAYANICRDIMPTEERGKIGMIKPSGWHTVKYDVIKDR
YLYNRCHLIGYQLAGENANPKNLITGTRYLNVEGMLPFENLVADYVNNTGNHVLYRVTPMFSGSNLVANGVLIEAKSVED
NGGGILFNVYCYNVQPGVGINYENGDSWLDGTTPQKQSAQTDTPQNEGSQSSAGSGAGESGSSGSTTGSASSGSDSSAAE
NSAADSSNSETMVHITATGKKYHRAGCRTLKKSDTEVTLDEAKSMGLSPCGICNPPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39693; Mature: 39693

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIWLKLRKTAAITLCELLAIATIFTGCASADLSGTEGAGHAAGAVVAGEDSSGALGSKD
CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
NADGPQEDLVNNNSYVSIDAIPAYDGKAYVAVNNNEPFFTDSDMTTTAFENYSDLDSLGR
CCCCCHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCEEECCCCEEHHHCCHHHHHHHHC
CGVAYANICRDIMPTEERGKIGMIKPSGWHTVKYDVIKDRYLYNRCHLIGYQLAGENANP
CCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEHHHHHHHHCEEEEEEEEEECCCCCC
KNLITGTRYLNVEGMLPFENLVADYVNNTGNHVLYRVTPMFSGSNLVANGVLIEAKSVED
CCEEECEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCEEECCEEEEEECCCC
NGGGILFNVYCYNVQPGVGINYENGDSWLDGTTPQKQSAQTDTPQNEGSQSSAGSGAGES
CCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSSGSTTGSASSGSDSSAAENSAADSSNSETMVHITATGKKYHRAGCRTLKKSDTEVTLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEHH
EAKSMGLSPCGICNPPQ
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNIWLKLRKTAAITLCELLAIATIFTGCASADLSGTEGAGHAAGAVVAGEDSSGALGSKD
CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
NADGPQEDLVNNNSYVSIDAIPAYDGKAYVAVNNNEPFFTDSDMTTTAFENYSDLDSLGR
CCCCCHHHHCCCCCEEEEEEEECCCCEEEEEECCCCCEEECCCCEEHHHCCHHHHHHHHC
CGVAYANICRDIMPTEERGKIGMIKPSGWHTVKYDVIKDRYLYNRCHLIGYQLAGENANP
CCHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEHHHHHHHHCEEEEEEEEEECCCCCC
KNLITGTRYLNVEGMLPFENLVADYVNNTGNHVLYRVTPMFSGSNLVANGVLIEAKSVED
CCEEECEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCEEECCEEEEEECCCC
NGGGILFNVYCYNVQPGVGINYENGDSWLDGTTPQKQSAQTDTPQNEGSQSSAGSGAGES
CCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSSGSTTGSASSGSDSSAAENSAADSSNSETMVHITATGKKYHRAGCRTLKKSDTEVTLD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEHH
EAKSMGLSPCGICNPPQ
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA