| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is insI1 [C]
Identifier: 238925088
GI number: 238925088
Start: 2603927
End: 2604766
Strand: Direct
Name: insI1 [C]
Synonym: EUBREC_2741
Alternate gene names: 238925088
Gene position: 2603927-2604766 (Clockwise)
Preceding gene: 238925086
Following gene: 238925089
Centisome position: 75.48
GC content: 42.26
Gene sequence:
>840_bases ATGACAAAACATGAATTACGCAAAAAGGATGGCATTGTTTCTCCTTTAATCGAGCAGGGACAATCTCCATATCAAATCAT TACCAATCATCCAGAACTGGATATGTCAGTCCGTTCCTTGTACACCTATCTGGATCAAGGTCTGTTTACAGCCAGAAACA TTGATTTAAAACGTAAGCCCGGCTTCAAGCCACGAAAGTGCCATAAAACACAGATTACAAACAGAACCGTCTTCGAGAAA AGGTTATTCAGTGATTTTAGTGAGCTGCAGTTATCCTCTTTTGTAGAAATGGATACGGTACACTCATCCAGAGAATCCAA CAAGACGTTACTGACCTTTTTCTTCACTAAGGAAAAGCTGTTCCTTGCCTTTCTCCTGAATCGTTGTACTAAAGGCGCTG TCCGGCTTATTTTTGACCGTTTAGAAAAACGTATGGGCACCTATGAGTTCTTATCTGTCTTTGAATATATCTTGACAGAC AGAGGTTCAGAATTCGGAGATCCTGTCGCTCTTGAAACAGGACTGGATGAAATTCAGCGTACCAGCATCTACTATTGTGA TCCCATGCGTAGCGGACAAAAAGGAGGTCTTGAGCAAGCTCACACCATGCTTCGCATGGTGCTTCCCAAAGGAACTAGTT TTGAATTTTTGACACAATGGGATGTGAATCTAATCGTGAATCACATCAACTCCACTCCAAGGGAAAGTCTTAATGGAAGC ACGCCTTATGACGCCGCATTAGAGACACTCGGAAAAGAAACCCTAAACGCATTTCAGCTTAAGCGCATTGACCCTGATTT GGTCAATCTAACGCCTAAGCTGATTCGCTTCAACCATTAA
Upstream 100 bases:
>100_bases GATAAATCATTGCACCATCGCCCAGAAATACAGATACGATGCACGTTTTGCTGATAGAAAATACCGTGAAAAGCTTTCCG GTTCCAGAGCCGGTATAAAC
Downstream 100 bases:
>100_bases CAACCACTTAGAAATCTGCTGTCGGACTGGAAATTAAACTTTCACATTTTCCTCACATGACCGGTGGAATTTAGTCTCGC ACACTACCTTCCAGTGGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Integrase Catalytic Region; IS30 Family Transposase; Transposase And Inactivated Derivatives; Integrase Catalytic Subunit; Transposase ISSmi1 InteRNAl Deletion; Integrase Core Domain Protein
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTKHELRKKDGIVSPLIEQGQSPYQIITNHPELDMSVRSLYTYLDQGLFTARNIDLKRKPGFKPRKCHKTQITNRTVFEK RLFSDFSELQLSSFVEMDTVHSSRESNKTLLTFFFTKEKLFLAFLLNRCTKGAVRLIFDRLEKRMGTYEFLSVFEYILTD RGSEFGDPVALETGLDEIQRTSIYYCDPMRSGQKGGLEQAHTMLRMVLPKGTSFEFLTQWDVNLIVNHINSTPRESLNGS TPYDAALETLGKETLNAFQLKRIDPDLVNLTPKLIRFNH
Sequences:
>Translated_279_residues MTKHELRKKDGIVSPLIEQGQSPYQIITNHPELDMSVRSLYTYLDQGLFTARNIDLKRKPGFKPRKCHKTQITNRTVFEK RLFSDFSELQLSSFVEMDTVHSSRESNKTLLTFFFTKEKLFLAFLLNRCTKGAVRLIFDRLEKRMGTYEFLSVFEYILTD RGSEFGDPVALETGLDEIQRTSIYYCDPMRSGQKGGLEQAHTMLRMVLPKGTSFEFLTQWDVNLIVNHINSTPRESLNGS TPYDAALETLGKETLNAFQLKRIDPDLVNLTPKLIRFNH >Mature_278_residues TKHELRKKDGIVSPLIEQGQSPYQIITNHPELDMSVRSLYTYLDQGLFTARNIDLKRKPGFKPRKCHKTQITNRTVFEKR LFSDFSELQLSSFVEMDTVHSSRESNKTLLTFFFTKEKLFLAFLLNRCTKGAVRLIFDRLEKRMGTYEFLSVFEYILTDR GSEFGDPVALETGLDEIQRTSIYYCDPMRSGQKGGLEQAHTMLRMVLPKGTSFEFLTQWDVNLIVNHINSTPRESLNGST PYDAALETLGKETLNAFQLKRIDPDLVNLTPKLIRFNH
Specific function: Required For The Transposition Of The Insertion Element (Potential). [C]
COG id: COG2826
COG function: function code L; Transposase and inactivated derivatives, IS30 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32260; Mature: 32129
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKHELRKKDGIVSPLIEQGQSPYQIITNHPELDMSVRSLYTYLDQGLFTARNIDLKRKP CCHHHHHHHCCCHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCC GFKPRKCHKTQITNRTVFEKRLFSDFSELQLSSFVEMDTVHSSRESNKTLLTFFFTKEKL CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHH FLAFLLNRCTKGAVRLIFDRLEKRMGTYEFLSVFEYILTDRGSEFGDPVALETGLDEIQR HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHH TSIYYCDPMRSGQKGGLEQAHTMLRMVLPKGTSFEFLTQWDVNLIVNHINSTPRESLNGS CCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCC TPYDAALETLGKETLNAFQLKRIDPDLVNLTPKLIRFNH CCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCCC >Mature Secondary Structure TKHELRKKDGIVSPLIEQGQSPYQIITNHPELDMSVRSLYTYLDQGLFTARNIDLKRKP CHHHHHHHCCCHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCC GFKPRKCHKTQITNRTVFEKRLFSDFSELQLSSFVEMDTVHSSRESNKTLLTFFFTKEKL CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHH FLAFLLNRCTKGAVRLIFDRLEKRMGTYEFLSVFEYILTDRGSEFGDPVALETGLDEIQR HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHH TSIYYCDPMRSGQKGGLEQAHTMLRMVLPKGTSFEFLTQWDVNLIVNHINSTPRESLNGS CCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCC TPYDAALETLGKETLNAFQLKRIDPDLVNLTPKLIRFNH CCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA