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The map label for this gene is parB1 [H]

Identifier: 238925030

GI number: 238925030

Start: 2559417

End: 2560796

Strand: Direct

Name: parB1 [H]

Synonym: EUBREC_2681

Alternate gene names: 238925030

Gene position: 2559417-2560796 (Clockwise)

Preceding gene: 238925027

Following gene: 238925031

Centisome position: 74.19

GC content: 55.07

Gene sequence:

>1380_bases
ATGCTTATGGCAGATGATAAAACCACAAAAACGCCGGAACAGCCGGTAACGGATAGCGGGCCGGGCAAGGAAACGCCTCC
CGCTCCCCCAAAAGAGCCGGAGAAGGTTTCCGTTTCTCCGGAGCCGGAAAAAAAGACGGAACCGGAGGTAAAGAACCCGC
AGGTTTCCGTCTATAACTTCGCTGAAATTATGAAGGAAAAGAAAGTCGAGGAACGGGCGGCAGCTCCCAGCGGGGAAAAG
CCTGTCCCGGCAAAAACGGAAAAACCGGAAAAGCAGCCGGAGGCTCCGAAGAAAGCGGAGGAAAAACCCAAAGAGCCGGA
ACAGCCGAAGCGCCGGGGCCGTCCCCCGAAGGCAGATAAGGACAAGGACGCAGCCCCGAAGCCCAAAGCTCCCGCACAGA
AACCGGAAAAGGCGGTCAAAAAGGAACCGGAGAAAAAAACGGCTCCAACGGTGCAGACTGCTCCCACTCCGAAGGAACCC
GAAAAGCCGAAGGATGCACCACGCCGGGGCAAGGAGCAGATCGTCTATATCAAGCTGAACGAGCTCTACGCCTTCAAGAA
CCATCCCTTTGAAGTCCGGGATGATGAAGAAATGCGGGCTATGGTGTCCAGCGTTAAGGACAAGGGCGTGACCCAGCCCG
CTATTGTTCGTCCCCGTGAGGATGGCGGCTATGAGATCGTGTCCGGCCACCGCCGCCAGAAAGCCAGCGAGCTTGCCGGG
TATGCGGATATGCCCTGTATCGTCCGAAACCTGACAGACGATGAAGCCATCACGCAGATGGTCGAGGACAATCTCAACCA
GCGTGAAGAAATCCTCCCCAGTGAGCGGGCCAAAGCCTTGAAAATGCAGCTTGAGGCCATCAAGCACCAGGGCTCCCGCA
CTTCGGGCCAGATTGACCCGAAGGACGCAGGCAAACGCTCCAACGAGATTGTGGCCGAGCGCAATAAGATGGCGGTCAAG
CAGGTGCAGCGGTATATCCGGCTCAATGAACTGGTTCCCGACCTGATGAAGCTGATGGATGAAAAAAAGCTGGGCTTTAC
TACGGCGGTGGAGCTTTCCTATATCGGCAAGAAGAACCAGAACTATATCGCCGTCGCCATTGACAGCCAGCAGTCCTCTC
CTTCGCAGGCGCAGGCAAAGCGTATGCGTGAGCTGGACGAAAAGAAGCTGCTCAACGGGGATGTGATCGACGGCATTATG
ATGGAGGACAAAAAGGAGGTAGACAAAGTGATTTTGACAGGTGCGGAACTGAGCAAATATTTCGGCAAGGAAACTACGCC
GAGGGAAATGAAGGACCAGATCATCAAGTTGCTGGACGACTGGAAGGGACAGCAGAAGGAACACGAAAAGCCGGAGAAGA
AAAACGAACAGGAAAAGTAA

Upstream 100 bases:

>100_bases
GGGCGGTATTTTTGTATCATGGCGGAGAAAGGAGGAACTTCCCACGGGGGCTTGACTGAAAAGTTGAGCCTCTTTTTTCA
TGCCAAAAAACAGGAGGTAA

Downstream 100 bases:

>100_bases
GCCCAAACTTCGGGTCAGCATGGCCCGAGGATTGCGGGGTTCTGCCCCGCGCCCCGAAGCTCTGGAGATATAAATGATTC
CCCGTCGCCAGTTATTCCGT

Product: ParB-like partition protein

Products: NA

Alternate protein names: Probable chromosome I-partitioning protein parB [H]

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MLMADDKTTKTPEQPVTDSGPGKETPPAPPKEPEKVSVSPEPEKKTEPEVKNPQVSVYNFAEIMKEKKVEERAAAPSGEK
PVPAKTEKPEKQPEAPKKAEEKPKEPEQPKRRGRPPKADKDKDAAPKPKAPAQKPEKAVKKEPEKKTAPTVQTAPTPKEP
EKPKDAPRRGKEQIVYIKLNELYAFKNHPFEVRDDEEMRAMVSSVKDKGVTQPAIVRPREDGGYEIVSGHRRQKASELAG
YADMPCIVRNLTDDEAITQMVEDNLNQREEILPSERAKALKMQLEAIKHQGSRTSGQIDPKDAGKRSNEIVAERNKMAVK
QVQRYIRLNELVPDLMKLMDEKKLGFTTAVELSYIGKKNQNYIAVAIDSQQSSPSQAQAKRMRELDEKKLLNGDVIDGIM
MEDKKEVDKVILTGAELSKYFGKETTPREMKDQIIKLLDDWKGQQKEHEKPEKKNEQEK

Sequences:

>Translated_459_residues
MLMADDKTTKTPEQPVTDSGPGKETPPAPPKEPEKVSVSPEPEKKTEPEVKNPQVSVYNFAEIMKEKKVEERAAAPSGEK
PVPAKTEKPEKQPEAPKKAEEKPKEPEQPKRRGRPPKADKDKDAAPKPKAPAQKPEKAVKKEPEKKTAPTVQTAPTPKEP
EKPKDAPRRGKEQIVYIKLNELYAFKNHPFEVRDDEEMRAMVSSVKDKGVTQPAIVRPREDGGYEIVSGHRRQKASELAG
YADMPCIVRNLTDDEAITQMVEDNLNQREEILPSERAKALKMQLEAIKHQGSRTSGQIDPKDAGKRSNEIVAERNKMAVK
QVQRYIRLNELVPDLMKLMDEKKLGFTTAVELSYIGKKNQNYIAVAIDSQQSSPSQAQAKRMRELDEKKLLNGDVIDGIM
MEDKKEVDKVILTGAELSKYFGKETTPREMKDQIIKLLDDWKGQQKEHEKPEKKNEQEK
>Mature_459_residues
MLMADDKTTKTPEQPVTDSGPGKETPPAPPKEPEKVSVSPEPEKKTEPEVKNPQVSVYNFAEIMKEKKVEERAAAPSGEK
PVPAKTEKPEKQPEAPKKAEEKPKEPEQPKRRGRPPKADKDKDAAPKPKAPAQKPEKAVKKEPEKKTAPTVQTAPTPKEP
EKPKDAPRRGKEQIVYIKLNELYAFKNHPFEVRDDEEMRAMVSSVKDKGVTQPAIVRPREDGGYEIVSGHRRQKASELAG
YADMPCIVRNLTDDEAITQMVEDNLNQREEILPSERAKALKMQLEAIKHQGSRTSGQIDPKDAGKRSNEIVAERNKMAVK
QVQRYIRLNELVPDLMKLMDEKKLGFTTAVELSYIGKKNQNYIAVAIDSQQSSPSQAQAKRMRELDEKKLLNGDVIDGIM
MEDKKEVDKVILTGAELSKYFGKETTPREMKDQIIKLLDDWKGQQKEHEKPEKKNEQEK

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 51840; Mature: 51840

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMADDKTTKTPEQPVTDSGPGKETPPAPPKEPEKVSVSPEPEKKTEPEVKNPQVSVYNF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHH
AEIMKEKKVEERAAAPSGEKPVPAKTEKPEKQPEAPKKAEEKPKEPEQPKRRGRPPKADK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHCCCCCCCCC
DKDAAPKPKAPAQKPEKAVKKEPEKKTAPTVQTAPTPKEPEKPKDAPRRGKEQIVYIKLN
CCCCCCCCCCCCCCHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEH
ELYAFKNHPFEVRDDEEMRAMVSSVKDKGVTQPAIVRPREDGGYEIVSGHRRQKASELAG
HHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHCCHHHHHHHHHCC
YADMPCIVRNLTDDEAITQMVEDNLNQREEILPSERAKALKMQLEAIKHQGSRTSGQIDP
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
KDAGKRSNEIVAERNKMAVKQVQRYIRLNELVPDLMKLMDEKKLGFTTAVELSYIGKKNQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHCCCCCC
NYIAVAIDSQQSSPSQAQAKRMRELDEKKLLNGDVIDGIMMEDKKEVDKVILTGAELSKY
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGKETTPREMKDQIIKLLDDWKGQQKEHEKPEKKNEQEK
HCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLMADDKTTKTPEQPVTDSGPGKETPPAPPKEPEKVSVSPEPEKKTEPEVKNPQVSVYNF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHH
AEIMKEKKVEERAAAPSGEKPVPAKTEKPEKQPEAPKKAEEKPKEPEQPKRRGRPPKADK
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHCCCCCCCCC
DKDAAPKPKAPAQKPEKAVKKEPEKKTAPTVQTAPTPKEPEKPKDAPRRGKEQIVYIKLN
CCCCCCCCCCCCCCHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEH
ELYAFKNHPFEVRDDEEMRAMVSSVKDKGVTQPAIVRPREDGGYEIVSGHRRQKASELAG
HHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHCCHHHHHHHHHCC
YADMPCIVRNLTDDEAITQMVEDNLNQREEILPSERAKALKMQLEAIKHQGSRTSGQIDP
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
KDAGKRSNEIVAERNKMAVKQVQRYIRLNELVPDLMKLMDEKKLGFTTAVELSYIGKKNQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHCCCCCC
NYIAVAIDSQQSSPSQAQAKRMRELDEKKLLNGDVIDGIMMEDKKEVDKVILTGAELSKY
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGKETTPREMKDQIIKLLDDWKGQQKEHEKPEKKNEQEK
HCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]