| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238924667
Identifier: 238924667
GI number: 238924667
Start: 2178907
End: 2180349
Strand: Direct
Name: 238924667
Synonym: EUBREC_2315
Alternate gene names: NA
Gene position: 2178907-2180349 (Clockwise)
Preceding gene: 238924666
Following gene: 238924670
Centisome position: 63.16
GC content: 44.77
Gene sequence:
>1443_bases ATGAAGAAAAAAGTGCTTATAACCTGCGCCGTTGTGCTTGGTGTGCTTTTGGCTGTTTATCTTGGCTTTGCCTTTTATTT TAGCAGCCACTATCTGTTCAACACAAAGATTAACTCTGTAAAATACGCAGGGAAAACTGCAAAAGAGGCATTAGAAAAAA ATACAGCCCTAAGCCGCGACTATCTGCTCACAATCACTGATAGAAAAGGCAACAGCTTTTCACTTAAGGGACCTGATTTT TCCTATGAATATGTCTCAAACGGTGACGAGGAGCAAATCCTAAAAAGCCAGAATGCTTTTACATGGCCTGTCAGTCTCTT CAAAGCTCAAAACTATACTCTAAAGGGTTCGTCCAAATATGACGATGCCGCTTTGGCGGAAAAGCTCAAGGCTCTTGATA TTTTCAGTGATGACTACATTGAGAATCCGGAGGATGCCCACATCGAGATAAAAGACGGCAAATACGATGTGATTGAAGAG AAAAAAGGCTGCAATCCGATATATGACAGCATCCTTGCCGAGGTAAAGGATGCCCTGGACAATGAGCTTCCAAAGCTTAG CTTAAACGATGACTGTTATGAAGCTCCAAAAATCACAAAGGAAAGCGATACAATCAAAAATGAAAAAGAAGCCCTCGACA AATACACTGCTTCAACCGTCACCTACAAAATTGAAGGTGCCGACGAGAAGCTTGACTCAGCCAAAATCCTTGATATGCTA AGCATCTCAGATGACGGCAGCGTGAGCATAGATGATGCCAAGGTCACTAAATATGTCCAGCAGCTTGCTTCCAAGTACAA TACCTTCGGCCGCAAGCGCTCGTTCAAAACATCGTCCGGTGACACTATTGAAATAGGTGGTGGAGACTACGGATGGGTAG TCAGCAAGAAAAATGAGAAAGCCCAGCTCCTTTCAGATTTAGAGGGCGGCAAGCCAGTGGAAAGAGAGCCTGTTTACGAG CAGACAGCACTCTACCGAGGCGCTGACGACATAGGTAATACATACATAGAGATTGACTACACAAAGCAGCACATGTGGTA TTACAAGGATGGTGCTCTCCAGATGGAGTCTGATTTCGTATCAGGTAATCTCGCCCGTCAGAATGGTTCCGTAGATGGTG TATACAAGATTGTTTACAAACAGAGAAATGCTACTCTTGTCGGCGAGGGATACTCTTCTCCTGTCAGCTATTTCATGCCG TTTGCCTACAATATAGGTATCCATGATGCCAGCTGGCGTGATACCTTCGGAGGAACAATTTACAAAACCTCCGGCTCACA CGGATGTATCAATGTGCCGCCTGCTTTTGCAGAGCAGCTGTTCAACGCTGTGGATAAAGGCACTCCTGTCGTTGCCTACT ACAGAGAGGCTGTCACTCTGACAAACAATGCTGCAAAGATGTCCAATGCATACTCGTATGTGGCTCCTGATGCTGCACAA TAA
Upstream 100 bases:
>100_bases TATATGGATGTGTCACATCTTCACAAATGTAACTGATTTTAGCTGCTGTCTACACCCCGGTGTGGGCAGCAACAGCATAT CTCCAAGGAGGTCGATTTAC
Downstream 100 bases:
>100_bases TTAATAATACGGGAAAGCGACCGGCACATAGGGATTGGCCCGCTCGGCAGAGGTGCTCCCGACGAGCTAACGCTACGCAG CTAAGGTACTGTACGAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; ErfK Family Protein; YkuD Domain-Containing Protein; Ykud Domain-Containing Protein; ErfK/YbiS/YcfS/YnhG Superfamily Protein; ErfK/YbiS/YcfS/YnhG Family; Extracellular Protein
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MKKKVLITCAVVLGVLLAVYLGFAFYFSSHYLFNTKINSVKYAGKTAKEALEKNTALSRDYLLTITDRKGNSFSLKGPDF SYEYVSNGDEEQILKSQNAFTWPVSLFKAQNYTLKGSSKYDDAALAEKLKALDIFSDDYIENPEDAHIEIKDGKYDVIEE KKGCNPIYDSILAEVKDALDNELPKLSLNDDCYEAPKITKESDTIKNEKEALDKYTASTVTYKIEGADEKLDSAKILDML SISDDGSVSIDDAKVTKYVQQLASKYNTFGRKRSFKTSSGDTIEIGGGDYGWVVSKKNEKAQLLSDLEGGKPVEREPVYE QTALYRGADDIGNTYIEIDYTKQHMWYYKDGALQMESDFVSGNLARQNGSVDGVYKIVYKQRNATLVGEGYSSPVSYFMP FAYNIGIHDASWRDTFGGTIYKTSGSHGCINVPPAFAEQLFNAVDKGTPVVAYYREAVTLTNNAAKMSNAYSYVAPDAAQ
Sequences:
>Translated_480_residues MKKKVLITCAVVLGVLLAVYLGFAFYFSSHYLFNTKINSVKYAGKTAKEALEKNTALSRDYLLTITDRKGNSFSLKGPDF SYEYVSNGDEEQILKSQNAFTWPVSLFKAQNYTLKGSSKYDDAALAEKLKALDIFSDDYIENPEDAHIEIKDGKYDVIEE KKGCNPIYDSILAEVKDALDNELPKLSLNDDCYEAPKITKESDTIKNEKEALDKYTASTVTYKIEGADEKLDSAKILDML SISDDGSVSIDDAKVTKYVQQLASKYNTFGRKRSFKTSSGDTIEIGGGDYGWVVSKKNEKAQLLSDLEGGKPVEREPVYE QTALYRGADDIGNTYIEIDYTKQHMWYYKDGALQMESDFVSGNLARQNGSVDGVYKIVYKQRNATLVGEGYSSPVSYFMP FAYNIGIHDASWRDTFGGTIYKTSGSHGCINVPPAFAEQLFNAVDKGTPVVAYYREAVTLTNNAAKMSNAYSYVAPDAAQ >Mature_480_residues MKKKVLITCAVVLGVLLAVYLGFAFYFSSHYLFNTKINSVKYAGKTAKEALEKNTALSRDYLLTITDRKGNSFSLKGPDF SYEYVSNGDEEQILKSQNAFTWPVSLFKAQNYTLKGSSKYDDAALAEKLKALDIFSDDYIENPEDAHIEIKDGKYDVIEE KKGCNPIYDSILAEVKDALDNELPKLSLNDDCYEAPKITKESDTIKNEKEALDKYTASTVTYKIEGADEKLDSAKILDML SISDDGSVSIDDAKVTKYVQQLASKYNTFGRKRSFKTSSGDTIEIGGGDYGWVVSKKNEKAQLLSDLEGGKPVEREPVYE QTALYRGADDIGNTYIEIDYTKQHMWYYKDGALQMESDFVSGNLARQNGSVDGVYKIVYKQRNATLVGEGYSSPVSYFMP FAYNIGIHDASWRDTFGGTIYKTSGSHGCINVPPAFAEQLFNAVDKGTPVVAYYREAVTLTNNAAKMSNAYSYVAPDAAQ
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53379; Mature: 53379
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKVLITCAVVLGVLLAVYLGFAFYFSSHYLFNTKINSVKYAGKTAKEALEKNTALSRD CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEECCHHHHHHHHHHCCCCCC YLLTITDRKGNSFSLKGPDFSYEYVSNGDEEQILKSQNAFTWPVSLFKAQNYTLKGSSKY EEEEEECCCCCEEEECCCCCCCHHHCCCCHHHHHHCCCCEECCHHHEECCCEEECCCCCC DDAALAEKLKALDIFSDDYIENPEDAHIEIKDGKYDVIEEKKGCNPIYDSILAEVKDALD CHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEHHCCCCCCHHHHHHHHHHHHHHH NELPKLSLNDDCYEAPKITKESDTIKNEKEALDKYTASTVTYKIEGADEKLDSAKILDML CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHE SISDDGSVSIDDAKVTKYVQQLASKYNTFGRKRSFKTSSGDTIEIGGGDYGWVVSKKNEK EECCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCH AQLLSDLEGGKPVEREPVYEQTALYRGADDIGNTYIEIDYTKQHMWYYKDGALQMESDFV HHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHCCEEEEEEEEECEEEEEECCCEEEECCCC SGNLARQNGSVDGVYKIVYKQRNATLVGEGYSSPVSYFMPFAYNIGIHDASWRDTFGGTI CCCEECCCCCCCCEEEEEEECCCCEEEECCCCCCHHHHCCEEEEECCCCCCCCCCCCCEE YKTSGSHGCINVPPAFAEQLFNAVDKGTPVVAYYREAVTLTNNAAKMSNAYSYVAPDAAQ EEECCCCCEEECCHHHHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHCCCCEECCCCCCC >Mature Secondary Structure MKKKVLITCAVVLGVLLAVYLGFAFYFSSHYLFNTKINSVKYAGKTAKEALEKNTALSRD CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEECCHHHHHHHHHHCCCCCC YLLTITDRKGNSFSLKGPDFSYEYVSNGDEEQILKSQNAFTWPVSLFKAQNYTLKGSSKY EEEEEECCCCCEEEECCCCCCCHHHCCCCHHHHHHCCCCEECCHHHEECCCEEECCCCCC DDAALAEKLKALDIFSDDYIENPEDAHIEIKDGKYDVIEEKKGCNPIYDSILAEVKDALD CHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEHHCCCCCCHHHHHHHHHHHHHHH NELPKLSLNDDCYEAPKITKESDTIKNEKEALDKYTASTVTYKIEGADEKLDSAKILDML CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHE SISDDGSVSIDDAKVTKYVQQLASKYNTFGRKRSFKTSSGDTIEIGGGDYGWVVSKKNEK EECCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCH AQLLSDLEGGKPVEREPVYEQTALYRGADDIGNTYIEIDYTKQHMWYYKDGALQMESDFV HHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHCCEEEEEEEEECEEEEEECCCEEEECCCC SGNLARQNGSVDGVYKIVYKQRNATLVGEGYSSPVSYFMPFAYNIGIHDASWRDTFGGTI CCCEECCCCCCCCEEEEEEECCCCEEEECCCCCCHHHHCCEEEEECCCCCCCCCCCCCEE YKTSGSHGCINVPPAFAEQLFNAVDKGTPVVAYYREAVTLTNNAAKMSNAYSYVAPDAAQ EEECCCCCEEECCHHHHHHHHHHHHCCCCEEEEEEEEEEEECCHHHHCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA