Definition | Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequence. |
---|---|
Accession | NC_012780 |
Length | 626,744 |
Click here to switch to the map view.
The map label for this gene is yeiQ [H]
Identifier: 238922358
GI number: 238922358
Start: 567211
End: 568830
Strand: Reverse
Name: yeiQ [H]
Synonym: EUBELI_20594
Alternate gene names: 238922358
Gene position: 568830-567211 (Counterclockwise)
Preceding gene: 238922359
Following gene: 238922357
Centisome position: 90.76
GC content: 36.36
Gene sequence:
>1620_bases ATGGAGGATATTATGAAACTTTCAATAAATGGTATTAAGAATACGACAGATTGGGAAAAGGCTGGCATAAAGCTGCCTTC ATATGATGTTGAAAAGGTTGCAGAGGATACAAAAAAGTCACCTGTATGGGTACATTTTGGTATTGGCAATATTTTCAGGA TATTCATTGGTGGAATTGCAGATTCATTATTAGAACAAGGAGTTTCAGATAAAGGCATTACATGTGTTGAAACATTTGAC TTCGATGTAGTAGATAAAATATATAAGCCATTTGATAATCTTGTTATGGCTGTTACATTGAAGGAGGATGGAAATACAGA AAAAAAGGTACTTGGTTCACTTACAGAAGCTATTAAGGCACAATCATATTCGCAGAAGGAATGGGAAAGATTAAAGGAGA TATTTGCTGACCCTGGGCTTCAGATGGTGTCATTTACTATTACAGAAAAAGGTTATGCGTTGAAGGATTCTAAAGGAGAG TTTTTTTCTTTTATCAGGGAAGACATTGATAATGGACCAGAAAAAGCAACATCAGCAATGGCAGTAACAGCAGCACTTTT GTATGAACGTTTTAAAGCCTGTAAGGCACCGATTGCAGTTGTATCAATGGATAACTGCTCACATAACGGAGAGAAACTTA GAAATTCGATAACCGAGATGGTAAGTGAGTGGAATAAAAAAGGATTTGTTGGTAATGATTTTGTTGATTATGTGAATAAT GAAGAGCTTGTATCATTTCCATGGTCTATGATTGATAAAATTACACCAAGACCAGCAGATAGTGTTGCTAAAGCATTAGA GGAAGCAGGTGTTGAGGATATGAGTCCGGTGATAACATCTAAGAAGACATATATTGCACCATTTGTAAATGCTGAAGGAC CACAGTATCTTGTAATAGAAGACAGGTTCCCTAATGGCAGACCTCAGCTTGAAAAAGCAGGTGTGTTTATGACTGATAGA CAGACAGTTAATAAGGTTGAGCGTATGAAAGTAACAACCTGCCTTAATCCGTTACACACAGCCTTAGCAGTATATGGCTG CTTATTAGGATATAATCTGATTGCTGATGAAATGAAAGACAAGGAACTTTCAGAGCTTGTGAGACGAATTGGGTTATCTG AGGGAATGCCTGTGGTAATTAATCCGGAGATAATTTCACCACAGAAGTTTGTGGATGAAGTTCTTAATGTAAGAATACCT AATCCTTTTATGCCTGATACACCGCAAAGAATAGCGACAGATACTTCACAGAAGGTAGGAATACGGTATGGTGAAACAAT TAAGTCATATGTTGCAAAGGACGGAAGTGCCAAAGAATTAATAGCGATTCCATTGGCAATTGCAGGATGGTGCAGATATC TTCTTGGAATTGATGATAATGGCGAAAGCTTCGAATTGTCTCCAGATCCGATGGCAGATGAATTAAAGAAGCATTTATCA GGTATAAAAATAGGTGACATATCATCTTATACAGGACAGCTTAAGAATTTATTGTCAAATGCTAATATATTTGGTATAAA TTTATATGAAGCAGGAATTGGCGATAAAATAGAAGAGATGTTTGTTGAAGAGATAGCAGGAAAGGGTGCTATAAGAAATA CACTTAAAAAATACCTTTAA
Upstream 100 bases:
>100_bases TTTATATGACAGGGCTTTAGGTGCAACATACCTTAATGGCTTATGGGAAGCTATTGATAAATCATCAAAGTAATTATTAA CATTGGGTTTTTATGACATA
Downstream 100 bases:
>100_bases TATATATAACAAGCAGGCTCATAGTATAAGAAAGGCCGCAGGGTTATGGAAAAATCATTAAACGAAGACACATACGAAAA ATTAAAATACGATATCATGA
Product: fructuronate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MEDIMKLSINGIKNTTDWEKAGIKLPSYDVEKVAEDTKKSPVWVHFGIGNIFRIFIGGIADSLLEQGVSDKGITCVETFD FDVVDKIYKPFDNLVMAVTLKEDGNTEKKVLGSLTEAIKAQSYSQKEWERLKEIFADPGLQMVSFTITEKGYALKDSKGE FFSFIREDIDNGPEKATSAMAVTAALLYERFKACKAPIAVVSMDNCSHNGEKLRNSITEMVSEWNKKGFVGNDFVDYVNN EELVSFPWSMIDKITPRPADSVAKALEEAGVEDMSPVITSKKTYIAPFVNAEGPQYLVIEDRFPNGRPQLEKAGVFMTDR QTVNKVERMKVTTCLNPLHTALAVYGCLLGYNLIADEMKDKELSELVRRIGLSEGMPVVINPEIISPQKFVDEVLNVRIP NPFMPDTPQRIATDTSQKVGIRYGETIKSYVAKDGSAKELIAIPLAIAGWCRYLLGIDDNGESFELSPDPMADELKKHLS GIKIGDISSYTGQLKNLLSNANIFGINLYEAGIGDKIEEMFVEEIAGKGAIRNTLKKYL
Sequences:
>Translated_539_residues MEDIMKLSINGIKNTTDWEKAGIKLPSYDVEKVAEDTKKSPVWVHFGIGNIFRIFIGGIADSLLEQGVSDKGITCVETFD FDVVDKIYKPFDNLVMAVTLKEDGNTEKKVLGSLTEAIKAQSYSQKEWERLKEIFADPGLQMVSFTITEKGYALKDSKGE FFSFIREDIDNGPEKATSAMAVTAALLYERFKACKAPIAVVSMDNCSHNGEKLRNSITEMVSEWNKKGFVGNDFVDYVNN EELVSFPWSMIDKITPRPADSVAKALEEAGVEDMSPVITSKKTYIAPFVNAEGPQYLVIEDRFPNGRPQLEKAGVFMTDR QTVNKVERMKVTTCLNPLHTALAVYGCLLGYNLIADEMKDKELSELVRRIGLSEGMPVVINPEIISPQKFVDEVLNVRIP NPFMPDTPQRIATDTSQKVGIRYGETIKSYVAKDGSAKELIAIPLAIAGWCRYLLGIDDNGESFELSPDPMADELKKHLS GIKIGDISSYTGQLKNLLSNANIFGINLYEAGIGDKIEEMFVEEIAGKGAIRNTLKKYL >Mature_539_residues MEDIMKLSINGIKNTTDWEKAGIKLPSYDVEKVAEDTKKSPVWVHFGIGNIFRIFIGGIADSLLEQGVSDKGITCVETFD FDVVDKIYKPFDNLVMAVTLKEDGNTEKKVLGSLTEAIKAQSYSQKEWERLKEIFADPGLQMVSFTITEKGYALKDSKGE FFSFIREDIDNGPEKATSAMAVTAALLYERFKACKAPIAVVSMDNCSHNGEKLRNSITEMVSEWNKKGFVGNDFVDYVNN EELVSFPWSMIDKITPRPADSVAKALEEAGVEDMSPVITSKKTYIAPFVNAEGPQYLVIEDRFPNGRPQLEKAGVFMTDR QTVNKVERMKVTTCLNPLHTALAVYGCLLGYNLIADEMKDKELSELVRRIGLSEGMPVVINPEIISPQKFVDEVLNVRIP NPFMPDTPQRIATDTSQKVGIRYGETIKSYVAKDGSAKELIAIPLAIAGWCRYLLGIDDNGESFELSPDPMADELKKHLS GIKIGDISSYTGQLKNLLSNANIFGINLYEAGIGDKIEEMFVEEIAGKGAIRNTLKKYL
Specific function: Unknown
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxuB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788497, Length=526, Percent_Identity=28.3269961977186, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI1787823, Length=523, Percent_Identity=28.8718929254302, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI1790779, Length=495, Percent_Identity=28.2828282828283, Blast_Score=138, Evalue=8e-34, Organism=Escherichia coli, GI48994885, Length=440, Percent_Identity=22.9545454545455, Blast_Score=69, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6324401, Length=464, Percent_Identity=28.2327586206897, Blast_Score=141, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6320765, Length=464, Percent_Identity=28.2327586206897, Blast_Score=141, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 59890; Mature: 59890
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDIMKLSINGIKNTTDWEKAGIKLPSYDVEKVAEDTKKSPVWVHFGIGNIFRIFIGGIA CCCCCEEECCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHH DSLLEQGVSDKGITCVETFDFDVVDKIYKPFDNLVMAVTLKEDGNTEKKVLGSLTEAIKA HHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH QSYSQKEWERLKEIFADPGLQMVSFTITEKGYALKDSKGEFFSFIREDIDNGPEKATSAM CCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCEEECCCHHHHHHHHHHHCCCHHHHHHHH AVTAALLYERFKACKAPIAVVSMDNCSHNGEKLRNSITEMVSEWNKKGFVGNDFVDYVNN HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC EELVSFPWSMIDKITPRPADSVAKALEEAGVEDMSPVITSKKTYIAPFVNAEGPQYLVIE CCCEECCHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCCEEEEEE DRFPNGRPQLEKAGVFMTDRQTVNKVERMKVTTCLNPLHTALAVYGCLLGYNLIADEMKD CCCCCCCCCHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH KELSELVRRIGLSEGMPVVINPEIISPQKFVDEVLNVRIPNPFMPDTPQRIATDTSQKVG HHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHCC IRYGETIKSYVAKDGSAKELIAIPLAIAGWCRYLLGIDDNGESFELSPDPMADELKKHLS CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHC GIKIGDISSYTGQLKNLLSNANIFGINLYEAGIGDKIEEMFVEEIAGKGAIRNTLKKYL CCEECCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHC >Mature Secondary Structure MEDIMKLSINGIKNTTDWEKAGIKLPSYDVEKVAEDTKKSPVWVHFGIGNIFRIFIGGIA CCCCCEEECCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHH DSLLEQGVSDKGITCVETFDFDVVDKIYKPFDNLVMAVTLKEDGNTEKKVLGSLTEAIKA HHHHHCCCCCCCCEEEEECCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH QSYSQKEWERLKEIFADPGLQMVSFTITEKGYALKDSKGEFFSFIREDIDNGPEKATSAM CCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCEEECCCHHHHHHHHHHHCCCHHHHHHHH AVTAALLYERFKACKAPIAVVSMDNCSHNGEKLRNSITEMVSEWNKKGFVGNDFVDYVNN HHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC EELVSFPWSMIDKITPRPADSVAKALEEAGVEDMSPVITSKKTYIAPFVNAEGPQYLVIE CCCEECCHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCCEEEEEE DRFPNGRPQLEKAGVFMTDRQTVNKVERMKVTTCLNPLHTALAVYGCLLGYNLIADEMKD CCCCCCCCCHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH KELSELVRRIGLSEGMPVVINPEIISPQKFVDEVLNVRIPNPFMPDTPQRIATDTSQKVG HHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCHHCC IRYGETIKSYVAKDGSAKELIAIPLAIAGWCRYLLGIDDNGESFELSPDPMADELKKHLS CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHC GIKIGDISSYTGQLKNLLSNANIFGINLYEAGIGDKIEEMFVEEIAGKGAIRNTLKKYL CCEECCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]