Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921590
Identifier: 238921590
GI number: 238921590
Start: 3630264
End: 3630617
Strand: Reverse
Name: 238921590
Synonym: NT01EI_3743
Alternate gene names: NA
Gene position: 3630617-3630264 (Counterclockwise)
Preceding gene: 238921592
Following gene: 238921589
Centisome position: 95.23
GC content: 59.32
Gene sequence:
>354_bases ATGCTGGGGTTGGCGATGCTGTTGGCGGGGTGCAGTGATACGACGGTAGAGCCCGCTTTTCGCGGTATATACAGTGAAGG TTTTGAGGTGAGTGGATTCACGCCTTGCGGCGGTGGTCGAGATGCCTGGCTGTATGACAACGATGGTCAGCTGCGTGCGG CAGAGAACCAGATAGCCCGTCAGCGCAGTCAGTTCAACCAGCCCTATCCCCATGTGTACGTTGAGTTCGATGGGGTGGAT GAGGGGAAAGGCAGCGAAGGCTTCCCGGCCGACTACGATCGGGTGATCCGGGTGACGCGCTTGTACACCGTCTCTCCCAA TGTGCCGACGGGGTGCCCCTACTCCGTCGAATGA
Upstream 100 bases:
>100_bases GGTGTACGCTGAGATTGATACGCAGTTAACTTGTAATGGCATATGCTGGGTCTCTCAAAATGGTACGGAGCAGGAGCGGG ATATGAGACGAGCGGGATGT
Downstream 100 bases:
>100_bases GTTGAGCAATGAGTGATGGTTTTAATAAATTTAATTAAATTTAATTTATTAACCGGATTAAAATCATATGAGTTATCATG ATTTACTGTATTTAAATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MLGLAMLLAGCSDTTVEPAFRGIYSEGFEVSGFTPCGGGRDAWLYDNDGQLRAAENQIARQRSQFNQPYPHVYVEFDGVD EGKGSEGFPADYDRVIRVTRLYTVSPNVPTGCPYSVE
Sequences:
>Translated_117_residues MLGLAMLLAGCSDTTVEPAFRGIYSEGFEVSGFTPCGGGRDAWLYDNDGQLRAAENQIARQRSQFNQPYPHVYVEFDGVD EGKGSEGFPADYDRVIRVTRLYTVSPNVPTGCPYSVE >Mature_117_residues MLGLAMLLAGCSDTTVEPAFRGIYSEGFEVSGFTPCGGGRDAWLYDNDGQLRAAENQIARQRSQFNQPYPHVYVEFDGVD EGKGSEGFPADYDRVIRVTRLYTVSPNVPTGCPYSVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12850; Mature: 12850
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGLAMLLAGCSDTTVEPAFRGIYSEGFEVSGFTPCGGGRDAWLYDNDGQLRAAENQIAR CCCHHHHHHCCCCCCCCHHHHHHHHCCEECCCCCCCCCCCCCEEECCCCCEEHHHHHHHH QRSQFNQPYPHVYVEFDGVDEGKGSEGFPADYDRVIRVTRLYTVSPNVPTGCPYSVE HHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHEEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MLGLAMLLAGCSDTTVEPAFRGIYSEGFEVSGFTPCGGGRDAWLYDNDGQLRAAENQIAR CCCHHHHHHCCCCCCCCHHHHHHHHCCEECCCCCCCCCCCCCEEECCCCCEEHHHHHHHH QRSQFNQPYPHVYVEFDGVDEGKGSEGFPADYDRVIRVTRLYTVSPNVPTGCPYSVE HHHHCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHEEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA