Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238921586

Identifier: 238921586

GI number: 238921586

Start: 3625308

End: 3625781

Strand: Reverse

Name: 238921586

Synonym: NT01EI_3739

Alternate gene names: NA

Gene position: 3625781-3625308 (Counterclockwise)

Preceding gene: 238921589

Following gene: 238921585

Centisome position: 95.11

GC content: 58.44

Gene sequence:

>474_bases
ATGAGCTGTATTTTTTGTCAAATCGTACGCGGCGAGGCGCCGTGCCATAAGATCTGGGAAGATGACGGGCATCTGGCCTT
TCTGTCTATCTATCCCAATACGGACGGGTTCAGTGTGGTTATCCCCAAGCGCCATTACCCCAGTTATGCCTTCGACTTGC
CCGACGATGTGCTGGCGAAGTTGACGCTGGCTACCAAGAAGGTGGCGCGGTTGCTCGATGCTGCCTTTGAGGACGTGGGC
CGCTGCGGCATGTTCTTTGAGGGGTTTGGCGTGGATCATGTGCACAGTAAGCTGTTCCCGATGCACGGCACCGCCAATAT
GGCCGAATGGCGCCCCATCGAGTCGCGCAGCGAGCGTTTCTTCACGCGTTATGAGGGCTATCTCTCCTCCCACGATGCCC
AGCGCGCCGATGACGCCCGATTGGCCGAGCTGGCACAACATATCCGGCGCGTCGCATTCGCCGCTACTCTCTAG

Upstream 100 bases:

>100_bases
GGCAGAGACCGGCGCGGCGCGATATTGGATAAAGTATACCCCATTTCATGGGCCGAGGCGTGATAAACCCGTGCGCCGCC
ATTGAGGAGATGCGAAGACG

Downstream 100 bases:

>100_bases
TCCGTGCGCGCAGAGATTGATTTTCTGCGCCACAGTCCCCATCCTAGGTTCATTACGCCTTATTTTATCCGCGGCGTCAC
GCGGCGGATAACCCGAATTC

Product: histidine triad

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSCIFCQIVRGEAPCHKIWEDDGHLAFLSIYPNTDGFSVVIPKRHYPSYAFDLPDDVLAKLTLATKKVARLLDAAFEDVG
RCGMFFEGFGVDHVHSKLFPMHGTANMAEWRPIESRSERFFTRYEGYLSSHDAQRADDARLAELAQHIRRVAFAATL

Sequences:

>Translated_157_residues
MSCIFCQIVRGEAPCHKIWEDDGHLAFLSIYPNTDGFSVVIPKRHYPSYAFDLPDDVLAKLTLATKKVARLLDAAFEDVG
RCGMFFEGFGVDHVHSKLFPMHGTANMAEWRPIESRSERFFTRYEGYLSSHDAQRADDARLAELAQHIRRVAFAATL
>Mature_156_residues
SCIFCQIVRGEAPCHKIWEDDGHLAFLSIYPNTDGFSVVIPKRHYPSYAFDLPDDVLAKLTLATKKVARLLDAAFEDVGR
CGMFFEGFGVDHVHSKLFPMHGTANMAEWRPIESRSERFFTRYEGYLSSHDAQRADDARLAELAQHIRRVAFAATL

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 17824; Mature: 17693

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCIFCQIVRGEAPCHKIWEDDGHLAFLSIYPNTDGFSVVIPKRHYPSYAFDLPDDVLAK
CCEEEEEEECCCCCCHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHH
LTLATKKVARLLDAAFEDVGRCGMFFEGFGVDHVHSKLFPMHGTANMAEWRPIESRSERF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
FTRYEGYLSSHDAQRADDARLAELAQHIRRVAFAATL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SCIFCQIVRGEAPCHKIWEDDGHLAFLSIYPNTDGFSVVIPKRHYPSYAFDLPDDVLAK
CEEEEEEECCCCCCHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHH
LTLATKKVARLLDAAFEDVGRCGMFFEGFGVDHVHSKLFPMHGTANMAEWRPIESRSERF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
FTRYEGYLSSHDAQRADDARLAELAQHIRRVAFAATL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]