Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921577
Identifier: 238921577
GI number: 238921577
Start: 3616046
End: 3616204
Strand: Reverse
Name: 238921577
Synonym: NT01EI_3730
Alternate gene names: NA
Gene position: 3616204-3616046 (Counterclockwise)
Preceding gene: 238921580
Following gene: 238921575
Centisome position: 94.86
GC content: 46.54
Gene sequence:
>159_bases ATGATTATTTTATGGTTTATTATTTTGAAATGGTGCGATTTTGTTGGCGAATCACACTATCCTGAAGAACGGTTGGGGGT ATGCTGTGGCCAAAATAAAAAACGCCGACGCGTAGAGACGCGCCGGCGTGATAAAGCAACCGCGGGACGATCGACGTGA
Upstream 100 bases:
>100_bases TGTTATGTCGCGAAAAGGGTCGGCGGGGCCTGTCACCCCACGATCTAATGAAACAGAATGCCATTTTATAAGCAGATAGG CTGCATTAAATGCGGCATAA
Downstream 100 bases:
>100_bases AGTTAGTCGTCCCCTTCATCCTTCAGCGGGACGATCAGCATGTCGATATGAACGGTATTAATCAGCTGGCGGGCGGAGGA CATCAGCTTGCTCCAGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 52
Protein sequence:
>52_residues MIILWFIILKWCDFVGESHYPEERLGVCCGQNKKRRRVETRRRDKATAGRST
Sequences:
>Translated_52_residues MIILWFIILKWCDFVGESHYPEERLGVCCGQNKKRRRVETRRRDKATAGRST >Mature_52_residues MIILWFIILKWCDFVGESHYPEERLGVCCGQNKKRRRVETRRRDKATAGRST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6211; Mature: 6211
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIILWFIILKWCDFVGESHYPEERLGVCCGQNKKRRRVETRRRDKATAGRST CHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIILWFIILKWCDFVGESHYPEERLGVCCGQNKKRRRVETRRRDKATAGRST CHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA