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The map label for this gene is occQ [H]

Identifier: 238921541

GI number: 238921541

Start: 3582667

End: 3583056

Strand: Reverse

Name: occQ [H]

Synonym: NT01EI_3693

Alternate gene names: 238921541

Gene position: 3583056-3582667 (Counterclockwise)

Preceding gene: 238921542

Following gene: 238921540

Centisome position: 93.99

GC content: 42.05

Gene sequence:

>390_bases
ATGATAGCGATCAATTTGAGCCTTGGCCTGATTGCTGCCGCTTTTTTGTCAGAGGTATTTCGTGGAGCCCTGAATGCGGT
AGACCGAACTGAACTACTGGCAGCTAAATCGATGGGGTTGGGGCGTTTGCAGATTTTCTTCAATATAGAGGCTCCACAGA
TGATTCGTTTTTCCTTTCCAGGTGTGGTTAATGAGTTTAGTACCGTACTAAAGAACTCGGCATTTGCCTACACAATTGGT
ATTTCAGAAATTATGCGTCAGGCCATGGCTTTGACCTCAACTACCAACTTGGGTGTGCTTGTCTATGTCATAGTTGGTTT
TTTGTATTTCTGTATTTACAAGGTGATTTTGTTTTTAATGGGACTGGTTGAGCATCGAATAGCTATTTAA

Upstream 100 bases:

>100_bases
TAGCTGTGTCTTTATATTTCGTAGTGTGCCAGTACTAGTACTAGTACTGGTTTTTCTGGTTTACTTCGGCCTACCTAACC
TTGGCTGGAGTGTTTCAGCT

Downstream 100 bases:

>100_bases
CTTAACACCTTGATATTTTTCTGGAGTGATGGAATGTCTTTAATTTCAATTCGTAATCTTGTAAAAAAATACGAAGAGAA
TTATGTGCTGGCAGGTATCG

Product: amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine

Products: ADP; phosphate; L-arginine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MIAINLSLGLIAAAFLSEVFRGALNAVDRTELLAAKSMGLGRLQIFFNIEAPQMIRFSFPGVVNEFSTVLKNSAFAYTIG
ISEIMRQAMALTSTTNLGVLVYVIVGFLYFCIYKVILFLMGLVEHRIAI

Sequences:

>Translated_129_residues
MIAINLSLGLIAAAFLSEVFRGALNAVDRTELLAAKSMGLGRLQIFFNIEAPQMIRFSFPGVVNEFSTVLKNSAFAYTIG
ISEIMRQAMALTSTTNLGVLVYVIVGFLYFCIYKVILFLMGLVEHRIAI
>Mature_129_residues
MIAINLSLGLIAAAFLSEVFRGALNAVDRTELLAAKSMGLGRLQIFFNIEAPQMIRFSFPGVVNEFSTVLKNSAFAYTIG
ISEIMRQAMALTSTTNLGVLVYVIVGFLYFCIYKVILFLMGLVEHRIAI

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787087, Length=121, Percent_Identity=28.099173553719, Blast_Score=70, Evalue=6e-14,
Organism=Escherichia coli, GI1788646, Length=129, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=4e-13,
Organism=Escherichia coli, GI1788226, Length=120, Percent_Identity=29.1666666666667, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 14202; Mature: 14202

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAINLSLGLIAAAFLSEVFRGALNAVDRTELLAAKSMGLGRLQIFFNIEAPQMIRFSFP
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCC
GVVNEFSTVLKNSAFAYTIGISEIMRQAMALTSTTNLGVLVYVIVGFLYFCIYKVILFLM
HHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLVEHRIAI
HHHHHHHCC
>Mature Secondary Structure
MIAINLSLGLIAAAFLSEVFRGALNAVDRTELLAAKSMGLGRLQIFFNIEAPQMIRFSFP
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEECCC
GVVNEFSTVLKNSAFAYTIGISEIMRQAMALTSTTNLGVLVYVIVGFLYFCIYKVILFLM
HHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLVEHRIAI
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-arginine [Periplasm]; H2O [C]

Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA