Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is yheU [C]
Identifier: 238921514
GI number: 238921514
Start: 3551991
End: 3552215
Strand: Reverse
Name: yheU [C]
Synonym: NT01EI_3666
Alternate gene names: 238921514
Gene position: 3552215-3551991 (Counterclockwise)
Preceding gene: 238921515
Following gene: 238921513
Centisome position: 93.18
GC content: 54.67
Gene sequence:
>225_bases GTGATCATTCCCTGGCAACAGATTGCCCCAGAGACGCTGGATAGCCTGATCGAGGCCTTTGTTCTGCGCGAGGGGACCGA CTATGGTGAGCAGGAGAGAAGCCTGACGCAGAAAGTGGAGGATGTACGGCATCAGCTGAAGTGCGGCGAGGCGGTTGTGG TATGGTCCGAGTTGCATGAAAGCGTCAATATTATGCCGCGTAGCCAGTTTAATGGCGTTGATTAG
Upstream 100 bases:
>100_bases GCGGCCACGTCGGCTTTATCGGCGGAACACTGCGCCATCCCTTCCCGTGGCTGGAGCAGCGTATTCCTGCCTGGTTAGCC CCCTATTTGGAGTAAAACAC
Downstream 100 bases:
>100_bases CGCACGTTGGCGTATTTTCCCGTGCTGCGTCTGGCGCCGCGCTGTGCAAATAAAAATCAAAAGCACCACGGGGGAGAAAA AACGGTGGCGAACAGTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MIIPWQQIAPETLDSLIEAFVLREGTDYGEQERSLTQKVEDVRHQLKCGEAVVVWSELHESVNIMPRSQFNGVD
Sequences:
>Translated_74_residues MIIPWQQIAPETLDSLIEAFVLREGTDYGEQERSLTQKVEDVRHQLKCGEAVVVWSELHESVNIMPRSQFNGVD >Mature_74_residues MIIPWQQIAPETLDSLIEAFVLREGTDYGEQERSLTQKVEDVRHQLKCGEAVVVWSELHESVNIMPRSQFNGVD
Specific function: Unknown
COG id: COG3089
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0270 family
Homologues:
Organism=Escherichia coli, GI1789753, Length=70, Percent_Identity=77.1428571428572, Blast_Score=121, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3666_EDWI9 (C5B954)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002935029.1 - ProteinModelPortal: C5B954 - GeneID: 7962174 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_3666 - OMA: MIIPWQD - ProtClustDB: CLSK2813703 - HAMAP: MF_00690 - InterPro: IPR010648 - Gene3D: G3DSA:1.10.10.610 - PIRSF: PIRSF006169 - ProDom: PD026997
Pfam domain/function: PF06794 UPF0270
EC number: NA
Molecular weight: Translated: 8498; Mature: 8498
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIPWQQIAPETLDSLIEAFVLREGTDYGEQERSLTQKVEDVRHQLKCGEAVVVWSELHE CCCCHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SVNIMPRSQFNGVD HHCCCCCCCCCCCC >Mature Secondary Structure MIIPWQQIAPETLDSLIEAFVLREGTDYGEQERSLTQKVEDVRHQLKCGEAVVVWSELHE CCCCHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH SVNIMPRSQFNGVD HHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA