Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
---|---|
Accession | NC_012779 |
Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238921490
Identifier: 238921490
GI number: 238921490
Start: 3528389
End: 3528505
Strand: Reverse
Name: 238921490
Synonym: NT01EI_3642
Alternate gene names: NA
Gene position: 3528505-3528389 (Counterclockwise)
Preceding gene: 238921492
Following gene: 238921480
Centisome position: 92.56
GC content: 38.46
Gene sequence:
>117_bases TTGTTAACCGAGATAGTCATCAAAAAAACAAAAATTCAGCGGAATCCATTTTGTGGCAGATCCTTCCATTTTGATAATCC CCGACGGGATCAATTATTGATCGATATCCTGGTGTGA
Upstream 100 bases:
>100_bases GCCGTAGGAGGCGAGATCAGCTGCGGTTAAACCTTTGGCATGCATTGAGCTACTCCTTATAGGTTATTTTTATCTGCGTC TACTGTATGTGGTTACGTGT
Downstream 100 bases:
>100_bases CCCGTCGTCCTGATGCTGAGTCAAAAGCGCGTCATTGGCCATTACCTGGATAGATGGCTGATGTCCAGGTCCCGGGGTAC TTCGGATACGTACCCCGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 38; Mature: 38
Protein sequence:
>38_residues MLTEIVIKKTKIQRNPFCGRSFHFDNPRRDQLLIDILV
Sequences:
>Translated_38_residues MLTEIVIKKTKIQRNPFCGRSFHFDNPRRDQLLIDILV >Mature_38_residues MLTEIVIKKTKIQRNPFCGRSFHFDNPRRDQLLIDILV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4557; Mature: 4557
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTEIVIKKTKIQRNPFCGRSFHFDNPRRDQLLIDILV CCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure MLTEIVIKKTKIQRNPFCGRSFHFDNPRRDQLLIDILV CCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA