Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
---|---|
Accession | NC_012779 |
Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238921474
Identifier: 238921474
GI number: 238921474
Start: 3512897
End: 3513217
Strand: Reverse
Name: 238921474
Synonym: NT01EI_3626
Alternate gene names: NA
Gene position: 3513217-3512897 (Counterclockwise)
Preceding gene: 238921475
Following gene: 238921473
Centisome position: 92.15
GC content: 66.98
Gene sequence:
>321_bases ATGAGGGCGTGTGGCATCAGATGGGGGGCGCTGCTGCTGGCGTGTGGCTGCGACGCTGCACGGGATCCTTTCCAGCCTCC CGAGCGCGCCACGGCAACGTCCGCGGCGGTCAGCGCCGTCGGGATCGTCGGTCGGACGCCCTGTTTTTCTCTGTGGCTGC GCGATGAGATTGGCCGTTGGCGGCCAGCGGCGCTGCCCGCCTCACCGAGTCCTGCCTTGTCCCGTTCATTGACGCTACGT TTTACGCCGCTGACGCTATATCCCTTTCGCTGTCCGCGCCTTATCCCTTTGGCGGCGCGTCGGGAGGGCGAGGGGACATG A
Upstream 100 bases:
>100_bases CGCTGGATACCCTGTCCGACTGCGGTCAGCGTGTGAGTACGCTGACGATCACGCCGCTCGCGCAGGGGGTGCATATAACC TGGGTGGAGCAGGAGGACGA
Downstream 100 bases:
>100_bases GATGTCTTCCTGCGTATGTCGCAGCTCTCGCGGTGCTGCTGGTCATGAGTCCGACGGGGCAGGCGATGCCCCTGACGCTC TGGTTCGATCGCGCTCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MRACGIRWGALLLACGCDAARDPFQPPERATATSAAVSAVGIVGRTPCFSLWLRDEIGRWRPAALPASPSPALSRSLTLR FTPLTLYPFRCPRLIPLAARREGEGT
Sequences:
>Translated_106_residues MRACGIRWGALLLACGCDAARDPFQPPERATATSAAVSAVGIVGRTPCFSLWLRDEIGRWRPAALPASPSPALSRSLTLR FTPLTLYPFRCPRLIPLAARREGEGT >Mature_106_residues MRACGIRWGALLLACGCDAARDPFQPPERATATSAAVSAVGIVGRTPCFSLWLRDEIGRWRPAALPASPSPALSRSLTLR FTPLTLYPFRCPRLIPLAARREGEGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11449; Mature: 11449
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRACGIRWGALLLACGCDAARDPFQPPERATATSAAVSAVGIVGRTPCFSLWLRDEIGRW CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC RPAALPASPSPALSRSLTLRFTPLTLYPFRCPRLIPLAARREGEGT CCCCCCCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRACGIRWGALLLACGCDAARDPFQPPERATATSAAVSAVGIVGRTPCFSLWLRDEIGRW CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC RPAALPASPSPALSRSLTLRFTPLTLYPFRCPRLIPLAARREGEGT CCCCCCCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA