Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is damX [H]
Identifier: 238921470
GI number: 238921470
Start: 3508610
End: 3509635
Strand: Reverse
Name: damX [H]
Synonym: NT01EI_3622
Alternate gene names: 238921470
Gene position: 3509635-3508610 (Counterclockwise)
Preceding gene: 238921471
Following gene: 238921469
Centisome position: 92.06
GC content: 64.91
Gene sequence:
>1026_bases ATGGATCAAGAAGAGTTTAAAGCAGATGATGAGTTAAAACCGGACGCCAGCGATCGTCGTTCGCCGCGTGCGCGCAGCCG ACGTCCCGCGACGCCGCGTCTGACGGTATCGCGTCAGCATCTGATGATCGGCGCCGGCGTCCTGGTATTGCTGGTGGTGA TCGTTGCGATCGGATCGGCGCTGAAGTCGCCCTCCAAGGGGAGCTCCGCCCAGTCTGCGGCTACGACGGGCAGCGCCAGA GAGATTAATCTATCTGGCGCATCTTCCATGACCAACGGCAGTGCCGGAAGTAACGTGACTGACGTTCAGGACGGTAGTGG GGTCAGTAACTCCGCGCCGCTGGGTCAGCCGCAGCCGATCACGATGCCCTCCATATCGCCGACGCCAACGCAGTCTGCTC CGGCGGCTCAGGAGCGCGGGCAGCAGCGGATCGATCTGGCGGGGAACTCTGTTTCCGATGCGCTGACTCAGCAGCAGGGC GCGTTGGACGCGATGCCGCAGGCCGACACGTTACCGACGGCACCGGCAACGGTGGCCGGTGGCGCAGCGCGTATCGCGCC GAAAGTGGCGGTCGAATCGACGCCGCGCCCCAAGACGCCGCCGCGTCGGGAGGAGCGGGCACCGGTCCGTCACAGCGAGA AGAGCGTAGCGCGGACACCTAGCGCACCGAAGCAAACGGCGCACCTGCCGGTGGTGGGCAGCAATGGTAAACCGGCGGCG CATCTGCCGCAGAGCGCCAACAGCAGCGCTGGGACGCTGAAGAGCGCCCCGGGCAGTCACTATACCCTACAGCTGAGCGG CGCCTCGCAGCCCACTACGCTGCATGCGTTTGCCCGTCACCAGAGCCTGAGCCATTACTGGGTATATGAAACATCCCGCA ACGGTAAGCCTTGGTACGTGCTGGTCAGCGGCAGCTATGCGACGCCGGCGGATGCCCGGCGGGCGATTGCGGCGTTGCCG ACAGAGGTGCAGGCGATGAAGCCCTGGGCTCGTCCGCTGAGCCAGGTGCAAAAGGATGCAAAGTAA
Upstream 100 bases:
>100_bases GATGTCGTGCGGGACGCGATTGCGGACTGCCTGGCCTGAGCGGTTAATTGGCGAGTCTCCGGCGCGGTACGGTCGGCTTT GCCCCTAAGTGGAGGGTGAG
Downstream 100 bases:
>100_bases GCTGTCACCCATAAAACGCGCGCGATGTGCTGTCTGAAAAGGTACGCCCTGGCGAATTGAAAGAGTAGAAATAACTGACT GGCGACGGCATGAAGAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MDQEEFKADDELKPDASDRRSPRARSRRPATPRLTVSRQHLMIGAGVLVLLVVIVAIGSALKSPSKGSSAQSAATTGSAR EINLSGASSMTNGSAGSNVTDVQDGSGVSNSAPLGQPQPITMPSISPTPTQSAPAAQERGQQRIDLAGNSVSDALTQQQG ALDAMPQADTLPTAPATVAGGAARIAPKVAVESTPRPKTPPRREERAPVRHSEKSVARTPSAPKQTAHLPVVGSNGKPAA HLPQSANSSAGTLKSAPGSHYTLQLSGASQPTTLHAFARHQSLSHYWVYETSRNGKPWYVLVSGSYATPADARRAIAALP TEVQAMKPWARPLSQVQKDAK
Sequences:
>Translated_341_residues MDQEEFKADDELKPDASDRRSPRARSRRPATPRLTVSRQHLMIGAGVLVLLVVIVAIGSALKSPSKGSSAQSAATTGSAR EINLSGASSMTNGSAGSNVTDVQDGSGVSNSAPLGQPQPITMPSISPTPTQSAPAAQERGQQRIDLAGNSVSDALTQQQG ALDAMPQADTLPTAPATVAGGAARIAPKVAVESTPRPKTPPRREERAPVRHSEKSVARTPSAPKQTAHLPVVGSNGKPAA HLPQSANSSAGTLKSAPGSHYTLQLSGASQPTTLHAFARHQSLSHYWVYETSRNGKPWYVLVSGSYATPADARRAIAALP TEVQAMKPWARPLSQVQKDAK >Mature_341_residues MDQEEFKADDELKPDASDRRSPRARSRRPATPRLTVSRQHLMIGAGVLVLLVVIVAIGSALKSPSKGSSAQSAATTGSAR EINLSGASSMTNGSAGSNVTDVQDGSGVSNSAPLGQPQPITMPSISPTPTQSAPAAQERGQQRIDLAGNSVSDALTQQQG ALDAMPQADTLPTAPATVAGGAARIAPKVAVESTPRPKTPPRREERAPVRHSEKSVARTPSAPKQTAHLPVVGSNGKPAA HLPQSANSSAGTLKSAPGSHYTLQLSGASQPTTLHAFARHQSLSHYWVYETSRNGKPWYVLVSGSYATPADARRAIAALP TEVQAMKPWARPLSQVQKDAK
Specific function: Directly or indirectly interferes with cell division [H]
COG id: COG3266
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789790, Length=362, Percent_Identity=41.1602209944751, Blast_Score=169, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007730 [H]
Pfam domain/function: PF05036 SPOR [H]
EC number: NA
Molecular weight: Translated: 35563; Mature: 35563
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQEEFKADDELKPDASDRRSPRARSRRPATPRLTVSRQHLMIGAGVLVLLVVIVAIGSA CCHHHHCCCCCCCCCCHHCCCCCHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH LKSPSKGSSAQSAATTGSAREINLSGASSMTNGSAGSNVTDVQDGSGVSNSAPLGQPQPI HCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TMPSISPTPTQSAPAAQERGQQRIDLAGNSVSDALTQQQGALDAMPQADTLPTAPATVAG CCCCCCCCCCCCCCCHHHHCCCEEECCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCHHCC GAARIAPKVAVESTPRPKTPPRREERAPVRHSEKSVARTPSAPKQTAHLPVVGSNGKPAA CHHHHCCHHEECCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCC HLPQSANSSAGTLKSAPGSHYTLQLSGASQPTTLHAFARHQSLSHYWVYETSRNGKPWYV CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCEEE LVSGSYATPADARRAIAALPTEVQAMKPWARPLSQVQKDAK EEECCCCCCHHHHHHHHHCCHHHHHHCHHHHHHHHHHHCCC >Mature Secondary Structure MDQEEFKADDELKPDASDRRSPRARSRRPATPRLTVSRQHLMIGAGVLVLLVVIVAIGSA CCHHHHCCCCCCCCCCHHCCCCCHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH LKSPSKGSSAQSAATTGSAREINLSGASSMTNGSAGSNVTDVQDGSGVSNSAPLGQPQPI HCCCCCCCCCHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TMPSISPTPTQSAPAAQERGQQRIDLAGNSVSDALTQQQGALDAMPQADTLPTAPATVAG CCCCCCCCCCCCCCCHHHHCCCEEECCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCHHCC GAARIAPKVAVESTPRPKTPPRREERAPVRHSEKSVARTPSAPKQTAHLPVVGSNGKPAA CHHHHCCHHEECCCCCCCCCCCHHHCCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCC HLPQSANSSAGTLKSAPGSHYTLQLSGASQPTTLHAFARHQSLSHYWVYETSRNGKPWYV CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCEEE LVSGSYATPADARRAIAALPTEVQAMKPWARPLSQVQKDAK EEECCCCCCHHHHHHHHHCCHHHHHHCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]