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The map label for this gene is yrdB [H]

Identifier: 238921403

GI number: 238921403

Start: 3458210

End: 3458491

Strand: Reverse

Name: yrdB [H]

Synonym: NT01EI_3553

Alternate gene names: 238921403

Gene position: 3458491-3458210 (Counterclockwise)

Preceding gene: 238921404

Following gene: 238921401

Centisome position: 90.72

GC content: 59.93

Gene sequence:

>282_bases
ATGAATCAGTCGATCCTCTTTCCCGAACTGGAGCAGTGGCAGGCGCCGTCATCGACCATCACCTTTCCGGCGATGGTCAA
CGGTTTTCAGGTCACCTGTGCTATTCGGCAGGCGGATCTGCAGGTCTTGGCCGCCCGCGTAGGTGCGGAGGAGGGGCATC
AGGCGCCGCTGACGCTGTTTCAGGCCCTGCGCTGGCAGCTGGAGGAGTATGCCGAGCGAGAAATTATCGATGACGCGTAT
GACGATCAGGGCTGGGTGTGGATTTCCGCCTGTGAGAGATAG

Upstream 100 bases:

>100_bases
GCATGCTGGTGGCGCAGGCGGCACACGCCTTCTCGCTGTGGCATGGCATCATGCCGCAGATAGCGCCGGTGCTGATACAG
CTACGCCAGGAGCCGGTGGG

Downstream 100 bases:

>100_bases
TCGTTCTTCCAGTTAACGTAGTTGTCGGCCGACTGGCGCAGCCCTGCCCGCTCCTGCGTCGTCAGTGGCCGGATTTGGCG
AGCCGGGCTGCCCAGATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MNQSILFPELEQWQAPSSTITFPAMVNGFQVTCAIRQADLQVLAARVGAEEGHQAPLTLFQALRWQLEEYAEREIIDDAY
DDQGWVWISACER

Sequences:

>Translated_93_residues
MNQSILFPELEQWQAPSSTITFPAMVNGFQVTCAIRQADLQVLAARVGAEEGHQAPLTLFQALRWQLEEYAEREIIDDAY
DDQGWVWISACER
>Mature_93_residues
MNQSILFPELEQWQAPSSTITFPAMVNGFQVTCAIRQADLQVLAARVGAEEGHQAPLTLFQALRWQLEEYAEREIIDDAY
DDQGWVWISACER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789674, Length=88, Percent_Identity=45.4545454545455, Blast_Score=73, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009962 [H]

Pfam domain/function: PF07369 DUF1488 [H]

EC number: NA

Molecular weight: Translated: 10614; Mature: 10614

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSILFPELEQWQAPSSTITFPAMVNGFQVTCAIRQADLQVLAARVGAEEGHQAPLTLF
CCCCCCCCCHHHCCCCCCCEEHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHH
QALRWQLEEYAEREIIDDAYDDQGWVWISACER
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MNQSILFPELEQWQAPSSTITFPAMVNGFQVTCAIRQADLQVLAARVGAEEGHQAPLTLF
CCCCCCCCCHHHCCCCCCCEEHHHHCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCHHHHH
QALRWQLEEYAEREIIDDAYDDQGWVWISACER
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]