Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921349
Identifier: 238921349
GI number: 238921349
Start: 3392011
End: 3392142
Strand: Reverse
Name: 238921349
Synonym: NT01EI_3493
Alternate gene names: NA
Gene position: 3392142-3392011 (Counterclockwise)
Preceding gene: 238921363
Following gene: 238921348
Centisome position: 88.98
GC content: 34.09
Gene sequence:
>132_bases ATGTCAGAACTGTGGTGTATCCGACATTTTGTACATTCCCAGAGGTTGTTTGCATTAAAAGGAAAAATCCGATCTACGAA AATAATTTATATAAATGATGATATGGTCAGCGTCGGAATTGTTTACTATTGA
Upstream 100 bases:
>100_bases TTAATCATTGAGTTTATGTTTAATATATTGTATTGCAAGGGGATTTTTGGTGTGTCTCTACGGCGATGTAAAGTGCGGTG GCGATGTGCTCAGATGGTAA
Downstream 100 bases:
>100_bases GGCAGACACTCTCCCCAGGCGGCGCACGCAGAGGGCGTCTTTTTTTCACGGCGATGACGCTTAACGGAATGGGTGGGGTC AGGGATGCGTATTACAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 43; Mature: 42
Protein sequence:
>43_residues MSELWCIRHFVHSQRLFALKGKIRSTKIIYINDDMVSVGIVYY
Sequences:
>Translated_43_residues MSELWCIRHFVHSQRLFALKGKIRSTKIIYINDDMVSVGIVYY >Mature_42_residues SELWCIRHFVHSQRLFALKGKIRSTKIIYINDDMVSVGIVYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5132; Mature: 5001
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELWCIRHFVHSQRLFALKGKIRSTKIIYINDDMVSVGIVYY CCCHHHHHHHHCCCEEEEECCCCCCEEEEEEECCEEEEEEEEC >Mature Secondary Structure SELWCIRHFVHSQRLFALKGKIRSTKIIYINDDMVSVGIVYY CCHHHHHHHHCCCEEEEECCCCCCEEEEEEECCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA