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The map label for this gene is hsdS [H]

Identifier: 238921300

GI number: 238921300

Start: 3333516

End: 3334487

Strand: Reverse

Name: hsdS [H]

Synonym: NT01EI_3443

Alternate gene names: 238921300

Gene position: 3334487-3333516 (Counterclockwise)

Preceding gene: 238921301

Following gene: 238921299

Centisome position: 87.47

GC content: 39.51

Gene sequence:

>972_bases
TTGATTGACGCTCGAACAGCTGGTTCAGCCTTTGGTGCATTTATGTCTTTATATCGTAGCCCTTTGGCTCCTTATGTTTT
TTATCAACTCCAATCTAATTTAGTTCAAAGGCAAATTGCAGAAACCCTGGGTGCGACGATAAATCAAATAACAAACAAAG
ATTTATCAAATTTCAAAATAGCAGTGCCTCGTAATAAAGATGAATATATCGAGATTTCCGATAAATTGGCAAGCATCGAC
GGTTTAATTATTGACCTGAAAAAAATAGTCAATAAAAAACAAGCTATCAAAACAGCCACTATGCAACAACTGCTGACGGG
GAAAACCCGTTTGCCGCAGTTTGCATTGCGAGAAGATGGGACGGTTAAGGGGTATAAAAAGAGTGAACTAGGGGAAATAC
CAGAAGATTGGTCTATTGAAAATTTCTCAACGCTGGCAACACTGAGAAATGAAAGAATTAACCCAAGAACAAAAGATATT
GAATGTTTATGTATTGAGCTTGAGCACATTATTTCAGAGTATGGTCAGTTAAATGGTTTCACTGAAACATCAGGCACATC
ATCAATAAAGAATGTTTTTTCGCCAAATGATATTCTTTTTGGAAAATTACGCTCCTATCTGAAAAAATACTGGAAGGCCA
CACAAAGCGGCGTTTGCTCTACTGAAATATGGGTATTAAAAACTGAGCTTCATAAAGCAATACCAGAGTTCATTTTTCAG
ACGGTTAAAACTGACCGCTTTGTTCAAACAGCATCCGAAGCTTATGGTACTCATATGCCACGCGCTGACTGGAAAATAAT
CAAAGAACTTCAAGTGGCAACACCATCCATTGAAGAACAAATCGCCATCGCCACCATCCTCTCCGATATGGACAAGGAGA
TTCAGACCTTGCACCAGCGTCTGGACAAAACCCGCCAGCTTAAACAGGGGATGATGCAGGAGCTGTTAACCGGGAAAACC
CGCTTAATATAG

Upstream 100 bases:

>100_bases
TTATGTTCAAATGCAACTTCCTAATCGGGTTATTACAAAATCTGGAGATATTTTAATTTGCGTCCGAAACGGTAGCAGGC
AACTAATTGGGAAATGCGCT

Downstream 100 bases:

>100_bases
AAGGGAACGCACATGGCTTATGATTACAGCGCCAACCTCAACCCGGAAAAAGCCCTGATCTGGCGCATTGTCCATCGGGA
TAATATCCCGTGGATACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: S.EcoDI; Type I restriction enzyme EcoDI specificity protein; S protein [H]

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MIDARTAGSAFGAFMSLYRSPLAPYVFYQLQSNLVQRQIAETLGATINQITNKDLSNFKIAVPRNKDEYIEISDKLASID
GLIIDLKKIVNKKQAIKTATMQQLLTGKTRLPQFALREDGTVKGYKKSELGEIPEDWSIENFSTLATLRNERINPRTKDI
ECLCIELEHIISEYGQLNGFTETSGTSSIKNVFSPNDILFGKLRSYLKKYWKATQSGVCSTEIWVLKTELHKAIPEFIFQ
TVKTDRFVQTASEAYGTHMPRADWKIIKELQVATPSIEEQIAIATILSDMDKEIQTLHQRLDKTRQLKQGMMQELLTGKT
RLI

Sequences:

>Translated_323_residues
MIDARTAGSAFGAFMSLYRSPLAPYVFYQLQSNLVQRQIAETLGATINQITNKDLSNFKIAVPRNKDEYIEISDKLASID
GLIIDLKKIVNKKQAIKTATMQQLLTGKTRLPQFALREDGTVKGYKKSELGEIPEDWSIENFSTLATLRNERINPRTKDI
ECLCIELEHIISEYGQLNGFTETSGTSSIKNVFSPNDILFGKLRSYLKKYWKATQSGVCSTEIWVLKTELHKAIPEFIFQ
TVKTDRFVQTASEAYGTHMPRADWKIIKELQVATPSIEEQIAIATILSDMDKEIQTLHQRLDKTRQLKQGMMQELLTGKT
RLI
>Mature_323_residues
MIDARTAGSAFGAFMSLYRSPLAPYVFYQLQSNLVQRQIAETLGATINQITNKDLSNFKIAVPRNKDEYIEISDKLASID
GLIIDLKKIVNKKQAIKTATMQQLLTGKTRLPQFALREDGTVKGYKKSELGEIPEDWSIENFSTLATLRNERINPRTKDI
ECLCIELEHIISEYGQLNGFTETSGTSSIKNVFSPNDILFGKLRSYLKKYWKATQSGVCSTEIWVLKTELHKAIPEFIFQ
TVKTDRFVQTASEAYGTHMPRADWKIIKELQVATPSIEEQIAIATILSDMDKEIQTLHQRLDKTRQLKQGMMQELLTGKT
RLI

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 36703; Mature: 36703

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDARTAGSAFGAFMSLYRSPLAPYVFYQLQSNLVQRQIAETLGATINQITNKDLSNFKI
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
AVPRNKDEYIEISDKLASIDGLIIDLKKIVNKKQAIKTATMQQLLTGKTRLPQFALREDG
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
TVKGYKKSELGEIPEDWSIENFSTLATLRNERINPRTKDIECLCIELEHIISEYGQLNGF
CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
TETSGTSSIKNVFSPNDILFGKLRSYLKKYWKATQSGVCSTEIWVLKTELHKAIPEFIFQ
CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
TVKTDRFVQTASEAYGTHMPRADWKIIKELQVATPSIEEQIAIATILSDMDKEIQTLHQR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LDKTRQLKQGMMQELLTGKTRLI
HHHHHHHHHHHHHHHHHCHHCCC
>Mature Secondary Structure
MIDARTAGSAFGAFMSLYRSPLAPYVFYQLQSNLVQRQIAETLGATINQITNKDLSNFKI
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
AVPRNKDEYIEISDKLASIDGLIIDLKKIVNKKQAIKTATMQQLLTGKTRLPQFALREDG
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
TVKGYKKSELGEIPEDWSIENFSTLATLRNERINPRTKDIECLCIELEHIISEYGQLNGF
CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
TETSGTSSIKNVFSPNDILFGKLRSYLKKYWKATQSGVCSTEIWVLKTELHKAIPEFIFQ
CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
TVKTDRFVQTASEAYGTHMPRADWKIIKELQVATPSIEEQIAIATILSDMDKEIQTLHQR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LDKTRQLKQGMMQELLTGKTRLI
HHHHHHHHHHHHHHHHHCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6304321 [H]