| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is add [H]
Identifier: 238921248
GI number: 238921248
Start: 3276885
End: 3278003
Strand: Direct
Name: add [H]
Synonym: NT01EI_3391
Alternate gene names: 238921248
Gene position: 3276885-3278003 (Clockwise)
Preceding gene: 238921247
Following gene: 238921249
Centisome position: 85.96
GC content: 66.85
Gene sequence:
>1119_bases ATGCCAGCGACGCAAACGATTACCTGGCCGGATTTTCTGGCCCGATTCCCCAAACTGGATCTGCACTACCACCTGCTGGG CGGCGTTCGCCTGGAGACGATGCGCGACCTGGCGAAGCAGGCAGGCGTGGCCCTCAGTGAACGCGATGCCAAGAGCTTCT ACCGCCGCTATCAGGCCCAGACCGGTCAGGTCAAAGGCGGTATCGCCGCCCTTAACTTCCTCTACCCGCTGCTGACGCGC CCCCGGGACTACTGCCGGGTCATACAGGAGGTGGCCGAGGACGCCGCGGCCACCGGGGTACGCCACCTGGAGCTGTTCTG GAACCCCTCTGACACCGCGCTGCCCTATGCCGAGGTCACCGCCGCGCTGGCGGAGGGGCTGGCCTGCGCCGCCCGGCGCT GGGATATCCACGCGCTGTTTCTGCCGGCCATCAACCGCGAAAAGAGCCCCGAAGAGGCCGTACGCATGGTGGAGACGGTG CTGGCGCACCCGCACCCGCTGGTGCCCGGCATCGGCATCGACTACCGCGAACACGATGCGCCGATAGAGCACTTCTGGAA AGCCTACCGTCTGGCGCGTCAGGGCGGACTGCGCCTGACCGGCCACTGCAGCGAGTTCGGCCTGCACTGGCGTAACGTGG AGAGCGGGCTGGATCTGCTGCACCTCGATCGCATCGATCACGGCTACAGCATCGTCGATAACCCCGAGCTGATGGCGCGC TGCGCCCGCGACGGCGTTCCCTTTACCGTGGTGCCCAGCAACACCTTCTTCCTCAAGCGCTGGCCCGATCGCGACGCGTG GCGCCAATGCCATCCCATCCGCCGCATGGCGGCGGCGGGCATCAACCTGATCCCGGCCACCGACGACTGGCATATGCACG ATACCAACGGCGCCGAATGCTACCGGGTCATGGTGGAGGAGTTCGGCTTCGATCTCGACGGGGTGCGAACCATGCTGGCC AACGCCATCGACGCCTGCTGGCAGCCGGCACCGCTCAAGGCGCGTTGGCGCCGCCAGTGGCTGGCCGAGTTCGATGCCCT GCGTGCCCGGCTGGCGCAGGAGCCGCCCTACGATACGCAGCGCCACGTCATCTACCAACGCCCTGTCTCGGGAGACTAA
Upstream 100 bases:
>100_bases CGGTGCCGAATCGGCCTGAGCCATGCCGGAATAGCATTTCACGCCCGGCGTACGTTCCCCTATGATGCGCCTTTCCTTTT TTCTGCCGCGGGATAGATCA
Downstream 100 bases:
>100_bases ACCATGTTAGTTATTGCCGGTATTGCAATCCTGATCCTGACGGTGATCCTGCTGATCAAGCGCCAGGATACCCGCACCGT GCTGCTGTTCTCCGGCCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MPATQTITWPDFLARFPKLDLHYHLLGGVRLETMRDLAKQAGVALSERDAKSFYRRYQAQTGQVKGGIAALNFLYPLLTR PRDYCRVIQEVAEDAAATGVRHLELFWNPSDTALPYAEVTAALAEGLACAARRWDIHALFLPAINREKSPEEAVRMVETV LAHPHPLVPGIGIDYREHDAPIEHFWKAYRLARQGGLRLTGHCSEFGLHWRNVESGLDLLHLDRIDHGYSIVDNPELMAR CARDGVPFTVVPSNTFFLKRWPDRDAWRQCHPIRRMAAAGINLIPATDDWHMHDTNGAECYRVMVEEFGFDLDGVRTMLA NAIDACWQPAPLKARWRRQWLAEFDALRARLAQEPPYDTQRHVIYQRPVSGD
Sequences:
>Translated_372_residues MPATQTITWPDFLARFPKLDLHYHLLGGVRLETMRDLAKQAGVALSERDAKSFYRRYQAQTGQVKGGIAALNFLYPLLTR PRDYCRVIQEVAEDAAATGVRHLELFWNPSDTALPYAEVTAALAEGLACAARRWDIHALFLPAINREKSPEEAVRMVETV LAHPHPLVPGIGIDYREHDAPIEHFWKAYRLARQGGLRLTGHCSEFGLHWRNVESGLDLLHLDRIDHGYSIVDNPELMAR CARDGVPFTVVPSNTFFLKRWPDRDAWRQCHPIRRMAAAGINLIPATDDWHMHDTNGAECYRVMVEEFGFDLDGVRTMLA NAIDACWQPAPLKARWRRQWLAEFDALRARLAQEPPYDTQRHVIYQRPVSGD >Mature_371_residues PATQTITWPDFLARFPKLDLHYHLLGGVRLETMRDLAKQAGVALSERDAKSFYRRYQAQTGQVKGGIAALNFLYPLLTRP RDYCRVIQEVAEDAAATGVRHLELFWNPSDTALPYAEVTAALAEGLACAARRWDIHALFLPAINREKSPEEAVRMVETVL AHPHPLVPGIGIDYREHDAPIEHFWKAYRLARQGGLRLTGHCSEFGLHWRNVESGLDLLHLDRIDHGYSIVDNPELMARC ARDGVPFTVVPSNTFFLKRWPDRDAWRQCHPIRRMAAAGINLIPATDDWHMHDTNGAECYRVMVEEFGFDLDGVRTMLAN AIDACWQPAPLKARWRRQWLAEFDALRARLAQEPPYDTQRHVIYQRPVSGD
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=334, Percent_Identity=22.1556886227545, Blast_Score=72, Evalue=8e-13, Organism=Escherichia coli, GI1787910, Length=338, Percent_Identity=22.4852071005917, Blast_Score=66, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6324188, Length=253, Percent_Identity=25.296442687747, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 42462; Mature: 42331
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATQTITWPDFLARFPKLDLHYHLLGGVRLETMRDLAKQAGVALSERDAKSFYRRYQAQ CCCCCCCCCHHHHHHCCCCCEEEHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC TGQVKGGIAALNFLYPLLTRPRDYCRVIQEVAEDAAATGVRHLELFWNPSDTALPYAEVT CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHH AALAEGLACAARRWDIHALFLPAINREKSPEEAVRMVETVLAHPHPLVPGIGIDYREHDA HHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PIEHFWKAYRLARQGGLRLTGHCSEFGLHWRNVESGLDLLHLDRIDHGYSIVDNPELMAR CHHHHHHHHHHHHHCCCEEEECHHHHCCCHHHHHCCCCEEEHHHCCCCCCCCCCHHHHHH CARDGVPFTVVPSNTFFLKRWPDRDAWRQCHPIRRMAAAGINLIPATDDWHMHDTNGAEC HHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHH YRVMVEEFGFDLDGVRTMLANAIDACWQPAPLKARWRRQWLAEFDALRARLAQEPPYDTQ HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC RHVIYQRPVSGD CCEEEECCCCCC >Mature Secondary Structure PATQTITWPDFLARFPKLDLHYHLLGGVRLETMRDLAKQAGVALSERDAKSFYRRYQAQ CCCCCCCCHHHHHHCCCCCEEEHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC TGQVKGGIAALNFLYPLLTRPRDYCRVIQEVAEDAAATGVRHLELFWNPSDTALPYAEVT CCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHH AALAEGLACAARRWDIHALFLPAINREKSPEEAVRMVETVLAHPHPLVPGIGIDYREHDA HHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PIEHFWKAYRLARQGGLRLTGHCSEFGLHWRNVESGLDLLHLDRIDHGYSIVDNPELMAR CHHHHHHHHHHHHHCCCEEEECHHHHCCCHHHHHCCCCEEEHHHCCCCCCCCCCHHHHHH CARDGVPFTVVPSNTFFLKRWPDRDAWRQCHPIRRMAAAGINLIPATDDWHMHDTNGAEC HHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHH YRVMVEEFGFDLDGVRTMLANAIDACWQPAPLKARWRRQWLAEFDALRARLAQEPPYDTQ HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC RHVIYQRPVSGD CCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA