Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is fba
Identifier: 238921224
GI number: 238921224
Start: 3252801
End: 3253877
Strand: Reverse
Name: fba
Synonym: NT01EI_3367
Alternate gene names: 238921224
Gene position: 3253877-3252801 (Counterclockwise)
Preceding gene: 238921225
Following gene: 238921223
Centisome position: 85.35
GC content: 57.2
Gene sequence:
>1077_bases ATGTCTAAAATCTTTGACTTTGTTAAACCGGGTGTCATCTTTGGCGATGACGTTCAGAAAGTATTCCAGGTTGCGAAAGA GAACAAATTCGCTCTGCCGGCCGTTAACTGCGTCGGTACGGACTCCATCAACGCGGTGATGGAGGCTGCAGCCAAGGTAC GCGCGCCGATCATCGTTCAGTTCTCCAACGGCGGTGCTGCCTTCATCGCCGGTAAAGGACTGAAGCTGGAGGGCCAGCAG GGGGCCATCCTCGGCGCGATCGCCGGTGCGCACCACGTGCATCAGATGGCCGAATACTACGGTGTTCCGGTGATCCTGCA TACCGACCACTGCGCCAAGAAGCTGCTGCCGTGGCTGGACGGGCTGCTGGATGCCGGTGAGAAGCACTTCGCCGCGACGG GCAAGCCGCTGTTCTCCTCCCACATGATCGATCTTTCCGAAGAGTCTCTGGAAGAGAACATTGAAATCTGCTCTCAGTAC CTGGCCCGCATGTCCAAGATCGGTATGACCCTGGAGCTGGAGCTGGGTTGCACCGGTGGTGAAGAAGACGGTGTGGACAA CAGTCACCTGGACAACTCCGCGCTGTACACCCAGCCGGAGGACGTGGACTACGCGTTCACCAAGCTGAGCGCCATCAGCC CGCGTTTCACCATCGCTGCCTCCTTCGGCAACGTGCACGGCGTGTACAAGCCGGGTAACGTGCAGCTGACGCCGGTGATC CTGAAAAACTCTCAGGAGTATGTCTCCAAGAAGCATAACCTGCCGCATAACAGCCTGAACTTTGTCTTCCACGGTGGCTC CGGCTCTACCGCGGCAGAGATCAAAGAAGCGGTCAGCTACGGTGTGGTGAAGATGAACATCGACACCGATACCCAGTGGG CAACCTGGGAAGGTGTGCTGAAGTACTACAAGAAGAACGAAGGTTATCTGCAGGGCCAGCTGGGTAATCCGGAAGGCGAC GACAAGCCGAACAAGAAGTACTACGATCCACGCGTATGGCTGCGTGCCGCTCAGACTGGCATGATCGAGCGTCTGGAGCA GGCGTTCAAAGAGCTGAACTGTATCGACGTGCTGTAA
Upstream 100 bases:
>100_bases ACGGGAGGCCATCATGCCTCCCGTTGTTTTATCGCGCCTTGGCGCGGTAATGTTGATCCGATTGGAAAACACTCACGCCC ACGAAACAGGACGATTAGAC
Downstream 100 bases:
>100_bases TCGTCGTCAATCGGCTGGAGAAACCCCGCGTTGCGGGGTTTTTTTATGCCGGGAGATCGCCGGGAAAGGGAAATATCATC GCGAGCGGCCATATCAATAC
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase
Number of amino acids: Translated: 358; Mature: 357
Protein sequence:
>358_residues MSKIFDFVKPGVIFGDDVQKVFQVAKENKFALPAVNCVGTDSINAVMEAAAKVRAPIIVQFSNGGAAFIAGKGLKLEGQQ GAILGAIAGAHHVHQMAEYYGVPVILHTDHCAKKLLPWLDGLLDAGEKHFAATGKPLFSSHMIDLSEESLEENIEICSQY LARMSKIGMTLELELGCTGGEEDGVDNSHLDNSALYTQPEDVDYAFTKLSAISPRFTIAASFGNVHGVYKPGNVQLTPVI LKNSQEYVSKKHNLPHNSLNFVFHGGSGSTAAEIKEAVSYGVVKMNIDTDTQWATWEGVLKYYKKNEGYLQGQLGNPEGD DKPNKKYYDPRVWLRAAQTGMIERLEQAFKELNCIDVL
Sequences:
>Translated_358_residues MSKIFDFVKPGVIFGDDVQKVFQVAKENKFALPAVNCVGTDSINAVMEAAAKVRAPIIVQFSNGGAAFIAGKGLKLEGQQ GAILGAIAGAHHVHQMAEYYGVPVILHTDHCAKKLLPWLDGLLDAGEKHFAATGKPLFSSHMIDLSEESLEENIEICSQY LARMSKIGMTLELELGCTGGEEDGVDNSHLDNSALYTQPEDVDYAFTKLSAISPRFTIAASFGNVHGVYKPGNVQLTPVI LKNSQEYVSKKHNLPHNSLNFVFHGGSGSTAAEIKEAVSYGVVKMNIDTDTQWATWEGVLKYYKKNEGYLQGQLGNPEGD DKPNKKYYDPRVWLRAAQTGMIERLEQAFKELNCIDVL >Mature_357_residues SKIFDFVKPGVIFGDDVQKVFQVAKENKFALPAVNCVGTDSINAVMEAAAKVRAPIIVQFSNGGAAFIAGKGLKLEGQQG AILGAIAGAHHVHQMAEYYGVPVILHTDHCAKKLLPWLDGLLDAGEKHFAATGKPLFSSHMIDLSEESLEENIEICSQYL ARMSKIGMTLELELGCTGGEEDGVDNSHLDNSALYTQPEDVDYAFTKLSAISPRFTIAASFGNVHGVYKPGNVQLTPVIL KNSQEYVSKKHNLPHNSLNFVFHGGSGSTAAEIKEAVSYGVVKMNIDTDTQWATWEGVLKYYKKNEGYLQGQLGNPEGDD KPNKKYYDPRVWLRAAQTGMIERLEQAFKELNCIDVL
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family
Homologues:
Organism=Escherichia coli, GI1789293, Length=359, Percent_Identity=87.7437325905292, Blast_Score=665, Evalue=0.0, Organism=Escherichia coli, GI87082041, Length=336, Percent_Identity=24.1071428571429, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788072, Length=272, Percent_Identity=26.4705882352941, Blast_Score=74, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322790, Length=351, Percent_Identity=49.002849002849, Blast_Score=359, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ALF_EDWI9 (O52402)
Other databases:
- EMBL: AF037440 - EMBL: CP001600 - RefSeq: YP_002934739.1 - GeneID: 7959666 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_3367 - OMA: QAYCAEK - ProtClustDB: PRK09197 - BRENDA: 4.1.2.13 - GO: GO:0006096 - InterPro: IPR013785 - InterPro: IPR006411 - InterPro: IPR000771 - Gene3D: G3DSA:3.20.20.70 - PIRSF: PIRSF001359 - TIGRFAMs: TIGR00167 - TIGRFAMs: TIGR01520
Pfam domain/function: PF01116 F_bP_aldolase
EC number: =4.1.2.13
Molecular weight: Translated: 39155; Mature: 39024
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00602 ALDOLASE_CLASS_II_1; PS00806 ALDOLASE_CLASS_II_2
Important sites: ACT_SITE 109-109 BINDING 62-62 BINDING 227-227
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIFDFVKPGVIFGDDVQKVFQVAKENKFALPAVNCVGTDSINAVMEAAAKVRAPIIVQ CCCHHHHHCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE FSNGGAAFIAGKGLKLEGQQGAILGAIAGAHHVHQMAEYYGVPVILHTDHCAKKLLPWLD ECCCCEEEEECCCEEEECCCCCEEEHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHH GLLDAGEKHFAATGKPLFSSHMIDLSEESLEENIEICSQYLARMSKIGMTLELELGCTGG HHHCCCCCCEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC EEDGVDNSHLDNSALYTQPEDVDYAFTKLSAISPRFTIAASFGNVHGVYKPGNVQLTPVI CCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCEECCCCEEEEEEE LKNSQEYVSKKHNLPHNSLNFVFHGGSGSTAAEIKEAVSYGVVKMNIDTDTQWATWEGVL ECCCHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHH KYYKKNEGYLQGQLGNPEGDDKPNKKYYDPRVWLRAAQTGMIERLEQAFKELNCIDVL HHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure SKIFDFVKPGVIFGDDVQKVFQVAKENKFALPAVNCVGTDSINAVMEAAAKVRAPIIVQ CCHHHHHCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE FSNGGAAFIAGKGLKLEGQQGAILGAIAGAHHVHQMAEYYGVPVILHTDHCAKKLLPWLD ECCCCEEEEECCCEEEECCCCCEEEHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHH GLLDAGEKHFAATGKPLFSSHMIDLSEESLEENIEICSQYLARMSKIGMTLELELGCTGG HHHCCCCCCEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC EEDGVDNSHLDNSALYTQPEDVDYAFTKLSAISPRFTIAASFGNVHGVYKPGNVQLTPVI CCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCEECCCCEEEEEEE LKNSQEYVSKKHNLPHNSLNFVFHGGSGSTAAEIKEAVSYGVVKMNIDTDTQWATWEGVL ECCCHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHH KYYKKNEGYLQGQLGNPEGDDKPNKKYYDPRVWLRAAQTGMIERLEQAFKELNCIDVL HHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12542086