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The map label for this gene is yaaJ [C]

Identifier: 238921208

GI number: 238921208

Start: 3234165

End: 3235577

Strand: Reverse

Name: yaaJ [C]

Synonym: NT01EI_3350

Alternate gene names: 238921208

Gene position: 3235577-3234165 (Counterclockwise)

Preceding gene: 238921209

Following gene: 238921206

Centisome position: 84.87

GC content: 56.62

Gene sequence:

>1413_bases
ATGGAACTTTTGGCACAGTGTGTGAACCGCATCAATAGTCTGTTGTGGAATGAGCTATTGATTTTTTTACTCTGCGGCAC
GGGGATCTATTACACCCTGCGTCTGGGCTTTATTCAGATCCGTCATTTCGGCTCCGGCTTTCGCGCGCTGTTTGGTGGTA
TGTCTCTGTCCGGCGATAAGGCGGACAAACAGGGGATGAGCTCATTTCAGGCGGTCGCCACGGCGATTGCAGGCCAGGTA
GGTACCGGGAACCTGGCCGGTCCGGCAACGGCGATCGTCGCCGGTGGCCCGGGTGCTATTTTTTGGATGTGGGTCTCCTC
ATTCCTGGGCATGGCGACGATTTATGCCGAGGCCATTCTGGCGCAGAAATATAAGTCTTTTGATAAACAGGGACACGTTG
TCGGCGGCCCGGCTTATTACATTGAGAAAGGACTGAACTGTAAATGGCTGGCCGCGCTGTTTTCTGTGCTGATTATTTTT
GCACTGGGCTTTATCGGTAATATGGTGCAGTCCAACTCGATCGCCGCCGCCTTTGAGGGCTCACTGGGTGTTCCGGGCTG
GATCGTCGGAGTGGTTCTGGCCGTGCTGACCGGCGGGGTTATCATGGGTGGGCTGCGCAGTATCGCCTCCTTCACGGAGA
AGGTGGTACCGACCATGGCGGTATTCTATCTGATCGGTGCGCTGCTGATCCTGGGCCTGAACGCCCACTATATTCTGCCG
GCGTTCAAGGCTATCTTCGTAGCGGCGTTCAACCCACAGGCGGTACTGGGCGGCGGTGCGGGGATCGCTATCCAGCAGGC
GATGCGTTTCGGTATTGCCCGCGGCCTGTTCTCGAACGAGGCCGGGATGGGGTCAACGCCGCATGCCCATGCGGTGGCCA
AGGTAAAGCACCCGGAGCAGCAGGGCTTTATTGCCATGATGGGGGTATTTGTGGTGTGCGTGATCGTCACTCTGACGGCG
CTGGTGATCATCACTTCTGGAATGGCAATGTGGCAGCAGGGCGGGCAGGCGCAGGCCTCTTTCCTCGGCGTATTTTCAGG
CCAGGGGATTGCCGTGACCCAGCAGGCATACTCCTATTTTTATGGCCACTTTGGCAGCCTGTTTATTTCCGCCTCACTGT
TCTTCTTCGCGTTCTCAACCATCATTGGCTGGTACTACTATGCGGAGACCAACGTTCGCTATCTGTTTAACTCACAGAAA
GCGGTGCGGGTGTATCAGATGTTGGTGGTCGCCTTTATCTTTATCGCCTCTTTCTTCCACGTGGAGCTGGTGTGGAATAT
GGCCGATATGTTCAATGGCCTGATGGTGCTGCCGAACCTCGCCGCGCTGTTGCTGTTGTCGCCGGTGGTGATCCGCCTGA
CCCGGGAAATCGGCCAGCGCCGTGACGACAGTGCAGTCACCGAAGGCGAATGA

Upstream 100 bases:

>100_bases
TTATGTTACCGCGCCCGTTTGCCGGGCGACGGCGGCATGCTATTTCCGTTTAGACGCCTAATACACCGACAGGCAAAAAT
AAAAACGGGTAATGTCAGGT

Downstream 100 bases:

>100_bases
TGTGGGTAGAGTGAGCATGACGGCGGCAGGGGACTCTCCCCTGCCGCCGTTTTACTTAGAGGTATAGATAGATAGCGAAG
AAGTGACAGGCGCTGCCGCC

Product: hypothetical protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MELLAQCVNRINSLLWNELLIFLLCGTGIYYTLRLGFIQIRHFGSGFRALFGGMSLSGDKADKQGMSSFQAVATAIAGQV
GTGNLAGPATAIVAGGPGAIFWMWVSSFLGMATIYAEAILAQKYKSFDKQGHVVGGPAYYIEKGLNCKWLAALFSVLIIF
ALGFIGNMVQSNSIAAAFEGSLGVPGWIVGVVLAVLTGGVIMGGLRSIASFTEKVVPTMAVFYLIGALLILGLNAHYILP
AFKAIFVAAFNPQAVLGGGAGIAIQQAMRFGIARGLFSNEAGMGSTPHAHAVAKVKHPEQQGFIAMMGVFVVCVIVTLTA
LVIITSGMAMWQQGGQAQASFLGVFSGQGIAVTQQAYSYFYGHFGSLFISASLFFFAFSTIIGWYYYAETNVRYLFNSQK
AVRVYQMLVVAFIFIASFFHVELVWNMADMFNGLMVLPNLAALLLLSPVVIRLTREIGQRRDDSAVTEGE

Sequences:

>Translated_470_residues
MELLAQCVNRINSLLWNELLIFLLCGTGIYYTLRLGFIQIRHFGSGFRALFGGMSLSGDKADKQGMSSFQAVATAIAGQV
GTGNLAGPATAIVAGGPGAIFWMWVSSFLGMATIYAEAILAQKYKSFDKQGHVVGGPAYYIEKGLNCKWLAALFSVLIIF
ALGFIGNMVQSNSIAAAFEGSLGVPGWIVGVVLAVLTGGVIMGGLRSIASFTEKVVPTMAVFYLIGALLILGLNAHYILP
AFKAIFVAAFNPQAVLGGGAGIAIQQAMRFGIARGLFSNEAGMGSTPHAHAVAKVKHPEQQGFIAMMGVFVVCVIVTLTA
LVIITSGMAMWQQGGQAQASFLGVFSGQGIAVTQQAYSYFYGHFGSLFISASLFFFAFSTIIGWYYYAETNVRYLFNSQK
AVRVYQMLVVAFIFIASFFHVELVWNMADMFNGLMVLPNLAALLLLSPVVIRLTREIGQRRDDSAVTEGE
>Mature_470_residues
MELLAQCVNRINSLLWNELLIFLLCGTGIYYTLRLGFIQIRHFGSGFRALFGGMSLSGDKADKQGMSSFQAVATAIAGQV
GTGNLAGPATAIVAGGPGAIFWMWVSSFLGMATIYAEAILAQKYKSFDKQGHVVGGPAYYIEKGLNCKWLAALFSVLIIF
ALGFIGNMVQSNSIAAAFEGSLGVPGWIVGVVLAVLTGGVIMGGLRSIASFTEKVVPTMAVFYLIGALLILGLNAHYILP
AFKAIFVAAFNPQAVLGGGAGIAIQQAMRFGIARGLFSNEAGMGSTPHAHAVAKVKHPEQQGFIAMMGVFVVCVIVTLTA
LVIITSGMAMWQQGGQAQASFLGVFSGQGIAVTQQAYSYFYGHFGSLFISASLFFFAFSTIIGWYYYAETNVRYLFNSQK
AVRVYQMLVVAFIFIASFFHVELVWNMADMFNGLMVLPNLAALLLLSPVVIRLTREIGQRRDDSAVTEGE

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=459, Percent_Identity=37.6906318082789, Blast_Score=283, Evalue=2e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 50389; Mature: 50389

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLAQCVNRINSLLWNELLIFLLCGTGIYYTLRLGFIQIRHFGSGFRALFGGMSLSGDK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
ADKQGMSSFQAVATAIAGQVGTGNLAGPATAIVAGGPGAIFWMWVSSFLGMATIYAEAIL
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
AQKYKSFDKQGHVVGGPAYYIEKGLNCKWLAALFSVLIIFALGFIGNMVQSNSIAAAFEG
HHHHHHHCCCCCEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
SLGVPGWIVGVVLAVLTGGVIMGGLRSIASFTEKVVPTMAVFYLIGALLILGLNAHYILP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AFKAIFVAAFNPQAVLGGGAGIAIQQAMRFGIARGLFSNEAGMGSTPHAHAVAKVKHPEQ
HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCC
QGFIAMMGVFVVCVIVTLTALVIITSGMAMWQQGGQAQASFLGVFSGQGIAVTQQAYSYF
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHEEECCCCEEEHHHHHHHH
YGHFGSLFISASLFFFAFSTIIGWYYYAETNVRYLFNSQKAVRVYQMLVVAFIFIASFFH
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
VELVWNMADMFNGLMVLPNLAALLLLSPVVIRLTREIGQRRDDSAVTEGE
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MELLAQCVNRINSLLWNELLIFLLCGTGIYYTLRLGFIQIRHFGSGFRALFGGMSLSGDK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
ADKQGMSSFQAVATAIAGQVGTGNLAGPATAIVAGGPGAIFWMWVSSFLGMATIYAEAIL
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
AQKYKSFDKQGHVVGGPAYYIEKGLNCKWLAALFSVLIIFALGFIGNMVQSNSIAAAFEG
HHHHHHHCCCCCEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
SLGVPGWIVGVVLAVLTGGVIMGGLRSIASFTEKVVPTMAVFYLIGALLILGLNAHYILP
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AFKAIFVAAFNPQAVLGGGAGIAIQQAMRFGIARGLFSNEAGMGSTPHAHAVAKVKHPEQ
HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCC
QGFIAMMGVFVVCVIVTLTALVIITSGMAMWQQGGQAQASFLGVFSGQGIAVTQQAYSYF
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHEEECCCCEEEHHHHHHHH
YGHFGSLFISASLFFFAFSTIIGWYYYAETNVRYLFNSQKAVRVYQMLVVAFIFIASFFH
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
VELVWNMADMFNGLMVLPNLAALLLLSPVVIRLTREIGQRRDDSAVTEGE
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]