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The map label for this gene is recJ [H]

Identifier: 238921198

GI number: 238921198

Start: 3224869

End: 3226596

Strand: Reverse

Name: recJ [H]

Synonym: NT01EI_3340

Alternate gene names: 238921198

Gene position: 3226596-3224869 (Counterclockwise)

Preceding gene: 238921199

Following gene: 238921196

Centisome position: 84.64

GC content: 64.47

Gene sequence:

>1728_bases
ATGAAGACACGGCTTTGCCGGCGAGAGGCGACGGCGGAGAGCCAGCTGCCGGACGGGATACCGCCGTTGCTGCGCCGTCT
GTACGGTAACCGCGGCGTGTGTAGCGCCGCTGAACTGGAGCGCGGGGTAAAGGGGCTGCTGTCGTATCAACAGCTGAATG
GCATTGAGCGTGCGGTGGTGCTGCTGCAGGAGGCGCTGGCGCAGCGTCTGCGTCTGGTGATCGTCGGTGACTTTGATGCG
GACGGCGCGACCAGCACCGCACTGTCGGTACTGGCGCTGCGTGCCATGGGCTGCGATAGCGTGCAGCATCTGGTACCTAA
CCGTTTTGAGGATGGCTATGGCCTTAGCCCGGAGGTGGTCGAACAGGCTGCCACCATGGGGGCAGAGCTGATTATGACCG
TGGATAACGGCGTGTCGTCGCATGCCGGGGTTGAGGCGGCCCACGCGCGCGGGATCCGCGTGCTGGTGACCGATCACCAC
CTACCGGGAGAGACGCTGCCGGCGGCGGAGGCCATCGTCAACCCAAATCTGGCCGACTGCGATTTTCCCTCCAAGTCGCT
GGCCGGTGTCGGTGTCGCCTTCTACCTGATGTTGGCGCTGCGTCGTCACCTGGTCGATCAGGGCTGGTTTGAACGGTTGG
GGCGTCCTGCGCCCAATCTGGCCGATCTGCTGGATTTGGTGGCGCTGGGCACCGTGGCGGATGTGGTGAGGCTGGATACC
AACAACCGTATTCTGGTGTATCAGGGGCTGAGCCGCATTCGCGCCGGGCGCTGTCGTCCGGGGATCCGCGCACTGCTGGA
GGTGGCCAAACGCGATGCCCCGCGCCTGACCGCCAGCGATCTTGGTTTTGCCCTGGGGCCGCGGCTGAATGCCGCCGGAC
GGCTGGACGATATGTCGCTGGGGGTGGCGCTGTTGCTGAGCGATGATATGCCGCAGGCACGTGCGCTGGCCAGCGATTTG
GACGCGCTCAACCAGACGCGCCGCGAGATAGAGCAGGGGATGCAGAGCGAGGCACTGGCGATCTGCGCCGGGCTGGAGCG
CACCCTGACGCAGCTGCCCTATGGGCTGGCGCTCTACCATCCAGAGTGGCATCAGGGCGTCGTGGGCATTCTGGCCTCGC
GCATCAAAGAGCGCTTTTACCGCCCGGTGATCGCCTTTGCTCCGGCCGGAGAGGGTTTACTGAAGGGGTCGGGGCGTTCG
CTGCCGGGGCTGCACATGCGCGACGCGCTAGAGCGTCTGGATATGCAGCACCCGGGGCTGATGCAGAAGTTTGGCGGTCA
TGCGATGGCGGCGGGGCTGACCATTGAGGCGGCGCGCTTTGACGATTTTCGTCATCACTTTGACACGCTGGTGGGTGAAT
GGCTCGATCCGGCCCAGCTGGAAGGGGTGGTTTGGTCGGATGGGGCGCTGAGCAGCGATGAGCTGACACTGCCGGTGGCG
GAACTGCTGCGCGACGGCGGTCCCTGGGGACAGGGCTTCCCGGAGCCGACCTTTGACGGTCAGTTTCGCATCCTACAGCA
GCGTCTGGTCGGAGAACGCCATCTTAAGCTGATGCTGGAACCGTTGGGCGGCGGCCCGCTGCTGGACGGCATTGCGTTTA
ATGTGGATACCACCCTGTGGCCAGACGCCAGCGTGCGTGAGGTGGAGCTGGCCTATCGGCTGGACATTAATGAGTACCGT
GGCAATCGCAGTGTACAGTTAATGATCCAACACCTCTGGCCGCGCTGA

Upstream 100 bases:

>100_bases
AACGGAATGGTGATCCCCGGCTATCAGGGGCCGAAAGAGATGCTGGCGATGCTGGATGCCCAGGCTCAGATGAGCCAGAA
GAAAGGTTAATGTTTTGACG

Downstream 100 bases:

>100_bases
GGCAGGGTCAGCAAAATCATGTATTGTAGAGGGGTGACGAAAGTTACCCCTCTTGTTTTATTAGCATAATTAATAACTGG
GGCGCACAGATTAGTAAATT

Product: ssDNA exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MKTRLCRREATAESQLPDGIPPLLRRLYGNRGVCSAAELERGVKGLLSYQQLNGIERAVVLLQEALAQRLRLVIVGDFDA
DGATSTALSVLALRAMGCDSVQHLVPNRFEDGYGLSPEVVEQAATMGAELIMTVDNGVSSHAGVEAAHARGIRVLVTDHH
LPGETLPAAEAIVNPNLADCDFPSKSLAGVGVAFYLMLALRRHLVDQGWFERLGRPAPNLADLLDLVALGTVADVVRLDT
NNRILVYQGLSRIRAGRCRPGIRALLEVAKRDAPRLTASDLGFALGPRLNAAGRLDDMSLGVALLLSDDMPQARALASDL
DALNQTRREIEQGMQSEALAICAGLERTLTQLPYGLALYHPEWHQGVVGILASRIKERFYRPVIAFAPAGEGLLKGSGRS
LPGLHMRDALERLDMQHPGLMQKFGGHAMAAGLTIEAARFDDFRHHFDTLVGEWLDPAQLEGVVWSDGALSSDELTLPVA
ELLRDGGPWGQGFPEPTFDGQFRILQQRLVGERHLKLMLEPLGGGPLLDGIAFNVDTTLWPDASVREVELAYRLDINEYR
GNRSVQLMIQHLWPR

Sequences:

>Translated_575_residues
MKTRLCRREATAESQLPDGIPPLLRRLYGNRGVCSAAELERGVKGLLSYQQLNGIERAVVLLQEALAQRLRLVIVGDFDA
DGATSTALSVLALRAMGCDSVQHLVPNRFEDGYGLSPEVVEQAATMGAELIMTVDNGVSSHAGVEAAHARGIRVLVTDHH
LPGETLPAAEAIVNPNLADCDFPSKSLAGVGVAFYLMLALRRHLVDQGWFERLGRPAPNLADLLDLVALGTVADVVRLDT
NNRILVYQGLSRIRAGRCRPGIRALLEVAKRDAPRLTASDLGFALGPRLNAAGRLDDMSLGVALLLSDDMPQARALASDL
DALNQTRREIEQGMQSEALAICAGLERTLTQLPYGLALYHPEWHQGVVGILASRIKERFYRPVIAFAPAGEGLLKGSGRS
LPGLHMRDALERLDMQHPGLMQKFGGHAMAAGLTIEAARFDDFRHHFDTLVGEWLDPAQLEGVVWSDGALSSDELTLPVA
ELLRDGGPWGQGFPEPTFDGQFRILQQRLVGERHLKLMLEPLGGGPLLDGIAFNVDTTLWPDASVREVELAYRLDINEYR
GNRSVQLMIQHLWPR
>Mature_575_residues
MKTRLCRREATAESQLPDGIPPLLRRLYGNRGVCSAAELERGVKGLLSYQQLNGIERAVVLLQEALAQRLRLVIVGDFDA
DGATSTALSVLALRAMGCDSVQHLVPNRFEDGYGLSPEVVEQAATMGAELIMTVDNGVSSHAGVEAAHARGIRVLVTDHH
LPGETLPAAEAIVNPNLADCDFPSKSLAGVGVAFYLMLALRRHLVDQGWFERLGRPAPNLADLLDLVALGTVADVVRLDT
NNRILVYQGLSRIRAGRCRPGIRALLEVAKRDAPRLTASDLGFALGPRLNAAGRLDDMSLGVALLLSDDMPQARALASDL
DALNQTRREIEQGMQSEALAICAGLERTLTQLPYGLALYHPEWHQGVVGILASRIKERFYRPVIAFAPAGEGLLKGSGRS
LPGLHMRDALERLDMQHPGLMQKFGGHAMAAGLTIEAARFDDFRHHFDTLVGEWLDPAQLEGVVWSDGALSSDELTLPVA
ELLRDGGPWGQGFPEPTFDGQFRILQQRLVGERHLKLMLEPLGGGPLLDGIAFNVDTTLWPDASVREVELAYRLDINEYR
GNRSVQLMIQHLWPR

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=573, Percent_Identity=72.2513089005236, Blast_Score=846, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62737; Mature: 62737

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRLCRREATAESQLPDGIPPLLRRLYGNRGVCSAAELERGVKGLLSYQQLNGIERAVV
CCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLQEALAQRLRLVIVGDFDADGATSTALSVLALRAMGCDSVQHLVPNRFEDGYGLSPEVV
HHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHH
EQAATMGAELIMTVDNGVSSHAGVEAAHARGIRVLVTDHHLPGETLPAAEAIVNPNLADC
HHHHHCCCEEEEEECCCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCHHHHHCCCCCCCC
DFPSKSLAGVGVAFYLMLALRRHLVDQGWFERLGRPAPNLADLLDLVALGTVADVVRLDT
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECC
NNRILVYQGLSRIRAGRCRPGIRALLEVAKRDAPRLTASDLGFALGPRLNAAGRLDDMSL
CCEEEEECCHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHCCHHHCCCCCCCCCCCCHHH
GVALLLSDDMPQARALASDLDALNQTRREIEQGMQSEALAICAGLERTLTQLPYGLALYH
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
PEWHQGVVGILASRIKERFYRPVIAFAPAGEGLLKGSGRSLPGLHMRDALERLDMQHPGL
CHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCH
MQKFGGHAMAAGLTIEAARFDDFRHHFDTLVGEWLDPAQLEGVVWSDGALSSDELTLPVA
HHHHCCCEEECCCEEEHHHHHHHHHHHHHHHHHCCCHHHHCCEEECCCCCCCCCCCCCHH
ELLRDGGPWGQGFPEPTFDGQFRILQQRLVGERHLKLMLEPLGGGPLLDGIAFNVDTTLW
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCCC
PDASVREVELAYRLDINEYRGNRSVQLMIQHLWPR
CCCCCCEEEEEEEECHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKTRLCRREATAESQLPDGIPPLLRRLYGNRGVCSAAELERGVKGLLSYQQLNGIERAVV
CCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLQEALAQRLRLVIVGDFDADGATSTALSVLALRAMGCDSVQHLVPNRFEDGYGLSPEVV
HHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHH
EQAATMGAELIMTVDNGVSSHAGVEAAHARGIRVLVTDHHLPGETLPAAEAIVNPNLADC
HHHHHCCCEEEEEECCCCCCCCCCHHHHHCCEEEEEECCCCCCCCCCHHHHHCCCCCCCC
DFPSKSLAGVGVAFYLMLALRRHLVDQGWFERLGRPAPNLADLLDLVALGTVADVVRLDT
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECC
NNRILVYQGLSRIRAGRCRPGIRALLEVAKRDAPRLTASDLGFALGPRLNAAGRLDDMSL
CCEEEEECCHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHCCHHHCCCCCCCCCCCCHHH
GVALLLSDDMPQARALASDLDALNQTRREIEQGMQSEALAICAGLERTLTQLPYGLALYH
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
PEWHQGVVGILASRIKERFYRPVIAFAPAGEGLLKGSGRSLPGLHMRDALERLDMQHPGL
CHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCH
MQKFGGHAMAAGLTIEAARFDDFRHHFDTLVGEWLDPAQLEGVVWSDGALSSDELTLPVA
HHHHCCCEEECCCEEEHHHHHHHHHHHHHHHHHCCCHHHHCCEEECCCCCCCCCCCCCHH
ELLRDGGPWGQGFPEPTFDGQFRILQQRLVGERHLKLMLEPLGGGPLLDGIAFNVDTTLW
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCCC
PDASVREVELAYRLDINEYRGNRSVQLMIQHLWPR
CCCCCCEEEEEEEECHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]