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The map label for this gene is hycH [H]

Identifier: 238921135

GI number: 238921135

Start: 3155260

End: 3155703

Strand: Direct

Name: hycH [H]

Synonym: NT01EI_3276

Alternate gene names: 238921135

Gene position: 3155260-3155703 (Clockwise)

Preceding gene: 238921134

Following gene: 238921136

Centisome position: 82.76

GC content: 61.71

Gene sequence:

>444_bases
ATGAGCGAACGTGCATCCGCCTATTTTCCCGACCCGACGGTGGTGTTTCATATCCTCAACGCCAAGTTTGTCCAGCAGGC
TGAAGATGAAGCGGCAACGCCGCCGGCAGCGCGGGAGGTTATCTACTACAGCCTGGCCATCGGTCACCACCTGGGGGTTA
TCGACTGCCTGAAGCCCTGCATCTCCCTGCCCCTGAGCGACTATCGGGCGTGGATAGCGCAGCTGGAGGCCGGCGAGGCG
CGACGTAAGCTGGAGGGCGTGCTGCGCTTTGGCGAGATCGGCATCGATATCAGCCATACCCATACGCTGGCCTGCGCGCT
GGATCGGGCGCTGCCGACAATGACGCCCCCGCAGCAGGCGTGGAGCCGCAGCCTGATCGACGCGCTGCAGCTGATCGAGA
ATGAACCGACAATCTATCTGATGGTGAAACGACACAATGGCTGA

Upstream 100 bases:

>100_bases
TAGACCGCTTCCTGGCGGCGGAAAACGATCCGCGCCTGAGCGAGGTAATGGGACGGCTGATGCAGGTGTGCAGCGATGCC
GCTCCCCGGGGAGACCACCG

Downstream 100 bases:

>100_bases
CAATCTAATCCTGTGCGTAGGCAACAGCATGATGGGCGACGATGGCGCCGGCCCACTGCTGGCGGAGAAGCTGTGCGGAC
ACCCCATCCCCGGCTGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSERASAYFPDPTVVFHILNAKFVQQAEDEAATPPAAREVIYYSLAIGHHLGVIDCLKPCISLPLSDYRAWIAQLEAGEA
RRKLEGVLRFGEIGIDISHTHTLACALDRALPTMTPPQQAWSRSLIDALQLIENEPTIYLMVKRHNG

Sequences:

>Translated_147_residues
MSERASAYFPDPTVVFHILNAKFVQQAEDEAATPPAAREVIYYSLAIGHHLGVIDCLKPCISLPLSDYRAWIAQLEAGEA
RRKLEGVLRFGEIGIDISHTHTLACALDRALPTMTPPQQAWSRSLIDALQLIENEPTIYLMVKRHNG
>Mature_146_residues
SERASAYFPDPTVVFHILNAKFVQQAEDEAATPPAAREVIYYSLAIGHHLGVIDCLKPCISLPLSDYRAWIAQLEAGEAR
RKLEGVLRFGEIGIDISHTHTLACALDRALPTMTPPQQAWSRSLIDALQLIENEPTIYLMVKRHNG

Specific function: Seems to be required for the conversion of a precursor form of the large subunit of hydrogenlyase (hycE) into a mature form [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli hyfJ [H]

Homologues:

Organism=Escherichia coli, GI1789073, Length=132, Percent_Identity=54.5454545454545, Blast_Score=138, Evalue=1e-34,
Organism=Escherichia coli, GI87082116, Length=131, Percent_Identity=45.0381679389313, Blast_Score=107, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010005
- ProDom:   PD021295 [H]

Pfam domain/function: PF07450 HycH [H]

EC number: NA

Molecular weight: Translated: 16364; Mature: 16233

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERASAYFPDPTVVFHILNAKFVQQAEDEAATPPAAREVIYYSLAIGHHLGVIDCLKPC
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
ISLPLSDYRAWIAQLEAGEARRKLEGVLRFGEIGIDISHTHTLACALDRALPTMTPPQQA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHCCCCCCHHHH
WSRSLIDALQLIENEPTIYLMVKRHNG
HHHHHHHHHHHHCCCCEEEEEEEECCC
>Mature Secondary Structure 
SERASAYFPDPTVVFHILNAKFVQQAEDEAATPPAAREVIYYSLAIGHHLGVIDCLKPC
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
ISLPLSDYRAWIAQLEAGEARRKLEGVLRFGEIGIDISHTHTLACALDRALPTMTPPQQA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHCCCCCCHHHH
WSRSLIDALQLIENEPTIYLMVKRHNG
HHHHHHHHHHHHCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]