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The map label for this gene is 238921098

Identifier: 238921098

GI number: 238921098

Start: 3108744

End: 3108914

Strand: Direct

Name: 238921098

Synonym: NT01EI_3234

Alternate gene names: NA

Gene position: 3108744-3108914 (Clockwise)

Preceding gene: 238921097

Following gene: 238921104

Centisome position: 81.54

GC content: 43.27

Gene sequence:

>171_bases
ATGACCGATGGTTATGACTGTTACCAGAATGCGTTGGCTGAGCGGATAAACGGTATTCTGAAAAATGTGTTTTTACTCTC
ATGCCCAGAGGATCTTGCGCAGGCCAGAACAATGGTAAAAAAATCTGTAGATATTTATAACCATGAGTGGCCACGTCTGG
CCCTGAAATAG

Upstream 100 bases:

>100_bases
AAAAACGACAGGTCCTCCAGTACATCACTCTAACAGAGGAGTGCAATACTGTTCAGCATTTTATCAGTCAATACATGAAA
GAAACGGGGTAACCTGTTCA

Downstream 100 bases:

>100_bases
AAAACGCCCGATGATGTTCATCAGGCGTTTTACAGACAAAAACTGTCAACCTATATCAGGACTCGTCAGCAAAAAGCATC
CAGGACGGATTAGCTGACGC

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase Catalytic Region; Integrase Protein; ISVisp4 Transposase OrfB; Transposase For Insertion Element IS; Integrase Core Domain Protein; ISPsy11 Transposase OrfB; Integrase

Number of amino acids: Translated: 56; Mature: 55

Protein sequence:

>56_residues
MTDGYDCYQNALAERINGILKNVFLLSCPEDLAQARTMVKKSVDIYNHEWPRLALK

Sequences:

>Translated_56_residues
MTDGYDCYQNALAERINGILKNVFLLSCPEDLAQARTMVKKSVDIYNHEWPRLALK
>Mature_55_residues
TDGYDCYQNALAERINGILKNVFLLSCPEDLAQARTMVKKSVDIYNHEWPRLALK

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6458; Mature: 6326

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDGYDCYQNALAERINGILKNVFLLSCPEDLAQARTMVKKSVDIYNHEWPRLALK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TDGYDCYQNALAERINGILKNVFLLSCPEDLAQARTMVKKSVDIYNHEWPRLALK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA