| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238921018
Identifier: 238921018
GI number: 238921018
Start: 3030654
End: 3031025
Strand: Direct
Name: 238921018
Synonym: NT01EI_3148
Alternate gene names: NA
Gene position: 3030654-3031025 (Clockwise)
Preceding gene: 238921017
Following gene: 238921019
Centisome position: 79.5
GC content: 52.69
Gene sequence:
>372_bases ATGAATGAGTTTTTAGAGGTACTAGCCCAATCAGAAAACCAACGGCAGAGGCTCCGCGTAACACCTGAAGAGTATCAACA TGCCGTTAATGCCTTAGTCGATATTGCCCTGACGAAAACCAGTGGCGGACGCGCCGCCGCGCAGGTACTGCTTTCTGCAT GGAACGGCTACGTATGGCAACTGGATATTCCCGACCTGTGTTATCTGGACTACGACCTGCTGGAACAAGCGCTGATCGTT ATCCGGGGCCGGGTGATGCTAATGAAGGAACCGCAGGAGGTTATCCCGGAGGGTAATGCGGTAATGAAGCGAATTGCGGC GCAGTGGCAACATCTGAACGCAGAACGGCGTGGAGAGAAACTGGATGATTAA
Upstream 100 bases:
>100_bases CAGCGCCATCAACGCCGAATTTAACCGCCGTTACCCTGCCGCACCACGCCGCCCGCCGACGGTGAAGTGCTGGGTTTTTC AACGTTAAAAGGAGAGAACG
Downstream 100 bases:
>100_bases GCACCCGGCAATCCGCTACCACAGCGGTAAGTGGCGGCTGGCTCCGTGGATCATAAGCCACTTTCCTGCCCATAAATGCT ATGTAGAACCCTTCGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MNEFLEVLAQSENQRQRLRVTPEEYQHAVNALVDIALTKTSGGRAAAQVLLSAWNGYVWQLDIPDLCYLDYDLLEQALIV IRGRVMLMKEPQEVIPEGNAVMKRIAAQWQHLNAERRGEKLDD
Sequences:
>Translated_123_residues MNEFLEVLAQSENQRQRLRVTPEEYQHAVNALVDIALTKTSGGRAAAQVLLSAWNGYVWQLDIPDLCYLDYDLLEQALIV IRGRVMLMKEPQEVIPEGNAVMKRIAAQWQHLNAERRGEKLDD >Mature_123_residues MNEFLEVLAQSENQRQRLRVTPEEYQHAVNALVDIALTKTSGGRAAAQVLLSAWNGYVWQLDIPDLCYLDYDLLEQALIV IRGRVMLMKEPQEVIPEGNAVMKRIAAQWQHLNAERRGEKLDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14089; Mature: 14089
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEFLEVLAQSENQRQRLRVTPEEYQHAVNALVDIALTKTSGGRAAAQVLLSAWNGYVWQ CCHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEE LDIPDLCYLDYDLLEQALIVIRGRVMLMKEPQEVIPEGNAVMKRIAAQWQHLNAERRGEK ECCCCHHHCCHHHHHHHHHHHHCCHHEEECCHHHCCCCHHHHHHHHHHHHHCCHHHCCCC LDD CCC >Mature Secondary Structure MNEFLEVLAQSENQRQRLRVTPEEYQHAVNALVDIALTKTSGGRAAAQVLLSAWNGYVWQ CCHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEE LDIPDLCYLDYDLLEQALIVIRGRVMLMKEPQEVIPEGNAVMKRIAAQWQHLNAERRGEK ECCCCHHHCCHHHHHHHHHHHHCCHHEEECCHHHCCCCHHHHHHHHHHHHHCCHHHCCCC LDD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA