Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238921017

Identifier: 238921017

GI number: 238921017

Start: 3027984

End: 3030641

Strand: Direct

Name: 238921017

Synonym: NT01EI_3147

Alternate gene names: NA

Gene position: 3027984-3030641 (Clockwise)

Preceding gene: 238921016

Following gene: 238921018

Centisome position: 79.43

GC content: 55.57

Gene sequence:

>2658_bases
ATGCAACCACAATTACATCAGGAAATCATGCGGCGACTGCTGGCCGACTTTTCCTTTAAAGAACAGGGGGACTGGCTACG
GCAGGGCGTCTGCCCGGACTGCCAGAAAAAGGAGCTGTACACCAGCGCCATCAGCCCGTGGGTATTACGCTGCGGTCGCC
TGAATAAATGCCATGCCGAACTCCATATCAAAGAGGTGTATCCGGATCTGTTTGAAAGCTGGTCGGACAGACACCCCTCA
ACGCCAGAAAACCCTCAGGCCGCCGCCGATGCCTATCTGCGCGAAATGCGCGGCTTCGACCTATCCCTGCTCCGTGATTG
TTACCGTCAGGAGAACCACTATAACGCGCGCTTAGATATCGGCTCGGCCACGGTGCGTTTCCCGCTGGCAGACGGCGTAT
GGTGGGAGCGGATCATTGACCGCCCGCAGCGCTTCGGCGATCGCAAGGCCAATTTTCACGGTGCTTACAGCGGGCTATGG
TGGCAACTGCCGACGCTAAAGCTGGAAGAGCAGCAGGAGATCTGGCTGGTTGAAGGTATTTTTGACGCCATCGCTCTGCA
CCACCACGGTATCGCCGCCGTTTCCCTGATGAGCTGCAACAACTATCCGGCGCAGGCGTTAAGCCAACTGGCCGCAATAT
TCACGGACAAGAAACGTCTCCTGCTGGTCTGGGCGCTGGATAATGATAAAGCAGGGATGAGCTACACCCGCCGCTGGGTG
AAACGCAGCCGCGACGATGGCTGGCCCGCCACCGCCGCACAGACGCCACATTCCCACAACAAGCTGGACTGGAACGATCT
GCACCAACGCGATCGGTTACACCCGGAGCTGATTAAAAAATACCGTTACTATGGCTCGCTGCTGATCGCCCCTAATCCGA
ACGCCAAAGCCTTGCTGATGTATGAGCGCACCGAGCGCAAGGAGTTTCACTTTGAATTCGACAGCCGCCTGTACTGGTTC
AAGCTGGATATTGACCGCTACATGCGCGCCTTTGATAACGTGATGTATAACAGCAAGGAGGATCTGGACGAGGAAGAGGC
CAAACATAAAGCCCTGCAGGAATCCGCCGCTGTTGTTGAGATAGCCAACTGCTACCCGACGGCCCTTTACTATCAGGCCA
ACGCCATCACCGACGAAAGTTGGTATTACTTCCGCATTAACTTCCCGGACGACACGCCGCCGATAAAAAACACCTTTACC
GGCTCCCAACTTTCCAGTGCTTCGGAGTTCAAAAAACGCCTGCTGCATATCGCGCAGGGCGGCATCTTCACAGGTACCAG
CCAGCAGTTAGATAAGCTGCTGCTTAAGCAACTTCCCCAAATCAAAACCGTCCAGACCACCGACTTTATTGGTTACAGCA
AAGAACATCACACCTACGTATTCAATGATCTGGCCGTGCGCAACGGTCGGCTATACCTGCTTAACGAAGAGGACTTTTTC
GACATGGGTAAACTCAACCTAAAAAGCCTGAATCAATCGGTCAATTTAGCACTCAACACGGATCTCAAACAAATGAACCC
ACAATGGCCGCAACTGCTCTGGCAGGCGTTTGGCGCTAAAGGTTTCGTTGCGCTGGCGTTTTGGCTCGGCTCACTGTTTG
CCGAGCAGATCCGCGATAAGCATAAAAGTTTTCCATTTCTGGAGATCGTCGGCGAGCCGGGCAGCGGCAAAACCACGCTG
ATCGAGTTCCTCTGGAAACTACTGGGGCGCCGCGATTATGAGGGCTTCGACCCATCCAAAGCGACGTTGGCCGCCCGTGC
GCGCAACTTTGCTCAGGTGGCGAACCTGCCGGTGGTACTGATTGAAGGCGACCGTAATCAGGACGGGGCAAAGCAGCGCG
GCTTCGACTGGGAAGAGCTGAAGACCGCTTATAATGGCCGTTCAGTGCGTTCGCGCGGCCTGCGTAACAGCGGTAACGAG
ACCTATGAACCACCGTTTCGAGGGGCGATCGTCATCGCACAGAACGCGGATGTCAGCGCTTCTACCCCGATACTGGAACG
TATTATCCACCTGTATACCGACCGCAGCGGGCAGAATGCACAGACCAAAGCCGCCGCCGAGCAGCTTGAGCGCCTGCCGG
TGGAACAGGTTTCCGGTTTTATGTTGAAAGCGGCGCTGACAGAGCAGGCCGTACTGGAGTGCGTCAACCGCCAGCTCCCG
ATTTATGAGCAGCAGCTTCACGCCCACCCCGATATTCGCCATATTCGCATCATTAAAAATCACGCCCAGCTTATGGCGCT
GCTCGACGCGCTGGCACTGGTTATTCCGGTCACGGAGGAGCAGCAACAGACAACCAGAGAAATGCTTGTCCAGCTCAGTC
TGGAACGCCAGCAGGCCATCAGCGCCGATCATCCTCTGGTACAGGAATTCTGGGATATTTTCGACTTCCTAGACGGAGAC
GACGAACCACAGCTTAACCACTCGCGCGACGAACAGCTTATTGCCGTCAACCTCAACCACTTCATTCAACAGGCCACCGA
ACGCCGGCAGCAAACCCCGCCCGTCAGCGACTTAAAACGGGTACTGAAAACCAGCCGTACCCACAAGTTTGTTGAAGTCA
GAACGGTGAACAGCGCCATCAACGCCGAATTTAACCGCCGTTACCCTGCCGCACCACGCCGCCCGCCGACGGTGAAGTGC
TGGGTTTTTCAACGTTAA

Upstream 100 bases:

>100_bases
AATAAATACACGTAATAATTTTAAATAAAGCAATCACCATATAAATAAAAAACACATTTTATGTGCCGGGAAGGTATTAC
CTGAATGAAAGGTGCAGGCA

Downstream 100 bases:

>100_bases
AAGGAGAGAACGATGAATGAGTTTTTAGAGGTACTAGCCCAATCAGAAAACCAACGGCAGAGGCTCCGCGTAACACCTGA
AGAGTATCAACATGCCGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Protein; Phage-Related Protein; Primase; DNA Primase-Like Protein; DNAG-Type Primase

Number of amino acids: Translated: 885; Mature: 885

Protein sequence:

>885_residues
MQPQLHQEIMRRLLADFSFKEQGDWLRQGVCPDCQKKELYTSAISPWVLRCGRLNKCHAELHIKEVYPDLFESWSDRHPS
TPENPQAAADAYLREMRGFDLSLLRDCYRQENHYNARLDIGSATVRFPLADGVWWERIIDRPQRFGDRKANFHGAYSGLW
WQLPTLKLEEQQEIWLVEGIFDAIALHHHGIAAVSLMSCNNYPAQALSQLAAIFTDKKRLLLVWALDNDKAGMSYTRRWV
KRSRDDGWPATAAQTPHSHNKLDWNDLHQRDRLHPELIKKYRYYGSLLIAPNPNAKALLMYERTERKEFHFEFDSRLYWF
KLDIDRYMRAFDNVMYNSKEDLDEEEAKHKALQESAAVVEIANCYPTALYYQANAITDESWYYFRINFPDDTPPIKNTFT
GSQLSSASEFKKRLLHIAQGGIFTGTSQQLDKLLLKQLPQIKTVQTTDFIGYSKEHHTYVFNDLAVRNGRLYLLNEEDFF
DMGKLNLKSLNQSVNLALNTDLKQMNPQWPQLLWQAFGAKGFVALAFWLGSLFAEQIRDKHKSFPFLEIVGEPGSGKTTL
IEFLWKLLGRRDYEGFDPSKATLAARARNFAQVANLPVVLIEGDRNQDGAKQRGFDWEELKTAYNGRSVRSRGLRNSGNE
TYEPPFRGAIVIAQNADVSASTPILERIIHLYTDRSGQNAQTKAAAEQLERLPVEQVSGFMLKAALTEQAVLECVNRQLP
IYEQQLHAHPDIRHIRIIKNHAQLMALLDALALVIPVTEEQQQTTREMLVQLSLERQQAISADHPLVQEFWDIFDFLDGD
DEPQLNHSRDEQLIAVNLNHFIQQATERRQQTPPVSDLKRVLKTSRTHKFVEVRTVNSAINAEFNRRYPAAPRRPPTVKC
WVFQR

Sequences:

>Translated_885_residues
MQPQLHQEIMRRLLADFSFKEQGDWLRQGVCPDCQKKELYTSAISPWVLRCGRLNKCHAELHIKEVYPDLFESWSDRHPS
TPENPQAAADAYLREMRGFDLSLLRDCYRQENHYNARLDIGSATVRFPLADGVWWERIIDRPQRFGDRKANFHGAYSGLW
WQLPTLKLEEQQEIWLVEGIFDAIALHHHGIAAVSLMSCNNYPAQALSQLAAIFTDKKRLLLVWALDNDKAGMSYTRRWV
KRSRDDGWPATAAQTPHSHNKLDWNDLHQRDRLHPELIKKYRYYGSLLIAPNPNAKALLMYERTERKEFHFEFDSRLYWF
KLDIDRYMRAFDNVMYNSKEDLDEEEAKHKALQESAAVVEIANCYPTALYYQANAITDESWYYFRINFPDDTPPIKNTFT
GSQLSSASEFKKRLLHIAQGGIFTGTSQQLDKLLLKQLPQIKTVQTTDFIGYSKEHHTYVFNDLAVRNGRLYLLNEEDFF
DMGKLNLKSLNQSVNLALNTDLKQMNPQWPQLLWQAFGAKGFVALAFWLGSLFAEQIRDKHKSFPFLEIVGEPGSGKTTL
IEFLWKLLGRRDYEGFDPSKATLAARARNFAQVANLPVVLIEGDRNQDGAKQRGFDWEELKTAYNGRSVRSRGLRNSGNE
TYEPPFRGAIVIAQNADVSASTPILERIIHLYTDRSGQNAQTKAAAEQLERLPVEQVSGFMLKAALTEQAVLECVNRQLP
IYEQQLHAHPDIRHIRIIKNHAQLMALLDALALVIPVTEEQQQTTREMLVQLSLERQQAISADHPLVQEFWDIFDFLDGD
DEPQLNHSRDEQLIAVNLNHFIQQATERRQQTPPVSDLKRVLKTSRTHKFVEVRTVNSAINAEFNRRYPAAPRRPPTVKC
WVFQR
>Mature_885_residues
MQPQLHQEIMRRLLADFSFKEQGDWLRQGVCPDCQKKELYTSAISPWVLRCGRLNKCHAELHIKEVYPDLFESWSDRHPS
TPENPQAAADAYLREMRGFDLSLLRDCYRQENHYNARLDIGSATVRFPLADGVWWERIIDRPQRFGDRKANFHGAYSGLW
WQLPTLKLEEQQEIWLVEGIFDAIALHHHGIAAVSLMSCNNYPAQALSQLAAIFTDKKRLLLVWALDNDKAGMSYTRRWV
KRSRDDGWPATAAQTPHSHNKLDWNDLHQRDRLHPELIKKYRYYGSLLIAPNPNAKALLMYERTERKEFHFEFDSRLYWF
KLDIDRYMRAFDNVMYNSKEDLDEEEAKHKALQESAAVVEIANCYPTALYYQANAITDESWYYFRINFPDDTPPIKNTFT
GSQLSSASEFKKRLLHIAQGGIFTGTSQQLDKLLLKQLPQIKTVQTTDFIGYSKEHHTYVFNDLAVRNGRLYLLNEEDFF
DMGKLNLKSLNQSVNLALNTDLKQMNPQWPQLLWQAFGAKGFVALAFWLGSLFAEQIRDKHKSFPFLEIVGEPGSGKTTL
IEFLWKLLGRRDYEGFDPSKATLAARARNFAQVANLPVVLIEGDRNQDGAKQRGFDWEELKTAYNGRSVRSRGLRNSGNE
TYEPPFRGAIVIAQNADVSASTPILERIIHLYTDRSGQNAQTKAAAEQLERLPVEQVSGFMLKAALTEQAVLECVNRQLP
IYEQQLHAHPDIRHIRIIKNHAQLMALLDALALVIPVTEEQQQTTREMLVQLSLERQQAISADHPLVQEFWDIFDFLDGD
DEPQLNHSRDEQLIAVNLNHFIQQATERRQQTPPVSDLKRVLKTSRTHKFVEVRTVNSAINAEFNRRYPAAPRRPPTVKC
WVFQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 102396; Mature: 102396

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPQLHQEIMRRLLADFSFKEQGDWLRQGVCPDCQKKELYTSAISPWVLRCGRLNKCHAE
CCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCHHHHHCCCCCCHHHH
LHIKEVYPDLFESWSDRHPSTPENPQAAADAYLREMRGFDLSLLRDCYRQENHYNARLDI
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEE
GSATVRFPLADGVWWERIIDRPQRFGDRKANFHGAYSGLWWQLPTLKLEEQQEIWLVEGI
CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEECCCCCEEHHHHH
FDAIALHHHGIAAVSLMSCNNYPAQALSQLAAIFTDKKRLLLVWALDNDKAGMSYTRRWV
HHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHH
KRSRDDGWPATAAQTPHSHNKLDWNDLHQRDRLHPELIKKYRYYGSLLIAPNPNAKALLM
HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCEEECCCCCCCEEEE
YERTERKEFHFEFDSRLYWFKLDIDRYMRAFDNVMYNSKEDLDEEEAKHKALQESAAVVE
EECCCCCEEEEEECCEEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEE
IANCYPTALYYQANAITDESWYYFRINFPDDTPPIKNTFTGSQLSSASEFKKRLLHIAQG
ECCCCCEEEEEEECCEECCCEEEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCC
GIFTGTSQQLDKLLLKQLPQIKTVQTTDFIGYSKEHHTYVFNDLAVRNGRLYLLNEEDFF
CEECCCHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCEEEEEEEEEECCEEEEECCCCCC
DMGKLNLKSLNQSVNLALNTDLKQMNPQWPQLLWQAFGAKGFVALAFWLGSLFAEQIRDK
CCCCCCHHHCCCCEEEEEECCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
HKSFPFLEIVGEPGSGKTTLIEFLWKLLGRRDYEGFDPSKATLAARARNFAQVANLPVVL
HCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
IEGDRNQDGAKQRGFDWEELKTAYNGRSVRSRGLRNSGNETYEPPFRGAIVIAQNADVSA
EECCCCCCCHHHCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC
STPILERIIHLYTDRSGQNAQTKAAAEQLERLPVEQVSGFMLKAALTEQAVLECVNRQLP
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
IYEQQLHAHPDIRHIRIIKNHAQLMALLDALALVIPVTEEQQQTTREMLVQLSLERQQAI
CHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SADHPLVQEFWDIFDFLDGDDEPQLNHSRDEQLIAVNLNHFIQQATERRQQTPPVSDLKR
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHH
VLKTSRTHKFVEVRTVNSAINAEFNRRYPAAPRRPPTVKCWVFQR
HHHHCCCCEEEEEEEHHHHHCCHHCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MQPQLHQEIMRRLLADFSFKEQGDWLRQGVCPDCQKKELYTSAISPWVLRCGRLNKCHAE
CCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCHHHHHCCCCCCHHHH
LHIKEVYPDLFESWSDRHPSTPENPQAAADAYLREMRGFDLSLLRDCYRQENHYNARLDI
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEE
GSATVRFPLADGVWWERIIDRPQRFGDRKANFHGAYSGLWWQLPTLKLEEQQEIWLVEGI
CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEECCCCCEEHHHHH
FDAIALHHHGIAAVSLMSCNNYPAQALSQLAAIFTDKKRLLLVWALDNDKAGMSYTRRWV
HHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHH
KRSRDDGWPATAAQTPHSHNKLDWNDLHQRDRLHPELIKKYRYYGSLLIAPNPNAKALLM
HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCEEECCCCCCCEEEE
YERTERKEFHFEFDSRLYWFKLDIDRYMRAFDNVMYNSKEDLDEEEAKHKALQESAAVVE
EECCCCCEEEEEECCEEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEE
IANCYPTALYYQANAITDESWYYFRINFPDDTPPIKNTFTGSQLSSASEFKKRLLHIAQG
ECCCCCEEEEEEECCEECCCEEEEEEECCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHCC
GIFTGTSQQLDKLLLKQLPQIKTVQTTDFIGYSKEHHTYVFNDLAVRNGRLYLLNEEDFF
CEECCCHHHHHHHHHHHCCCCEEEEEHHCCCCCCCCCEEEEEEEEEECCEEEEECCCCCC
DMGKLNLKSLNQSVNLALNTDLKQMNPQWPQLLWQAFGAKGFVALAFWLGSLFAEQIRDK
CCCCCCHHHCCCCEEEEEECCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
HKSFPFLEIVGEPGSGKTTLIEFLWKLLGRRDYEGFDPSKATLAARARNFAQVANLPVVL
HCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
IEGDRNQDGAKQRGFDWEELKTAYNGRSVRSRGLRNSGNETYEPPFRGAIVIAQNADVSA
EECCCCCCCHHHCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC
STPILERIIHLYTDRSGQNAQTKAAAEQLERLPVEQVSGFMLKAALTEQAVLECVNRQLP
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
IYEQQLHAHPDIRHIRIIKNHAQLMALLDALALVIPVTEEQQQTTREMLVQLSLERQQAI
CHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
SADHPLVQEFWDIFDFLDGDDEPQLNHSRDEQLIAVNLNHFIQQATERRQQTPPVSDLKR
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHH
VLKTSRTHKFVEVRTVNSAINAEFNRRYPAAPRRPPTVKCWVFQR
HHHHCCCCEEEEEEEHHHHHCCHHCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA