Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238921011

Identifier: 238921011

GI number: 238921011

Start: 3023551

End: 3023979

Strand: Direct

Name: 238921011

Synonym: NT01EI_3141

Alternate gene names: NA

Gene position: 3023551-3023979 (Clockwise)

Preceding gene: 238921010

Following gene: 238921012

Centisome position: 79.31

GC content: 55.94

Gene sequence:

>429_bases
ATGATGATGACGCTGGGGCTGTTTGTTTTCAGTCTGAAAACCCTGCCCTATCAGGATCTGCAACAGTCGATATCCTGGCG
ACATCCCACCAGTTCCCGCGTGGGTCAACGCCCTGCAAGCCAGTTTATCGGCGTAGGCGACGAGGCTGTTACGCTAAACG
GCGTACTGCTGCCGGAACTCACTGGTGGACGCTTTACCCTGTTCTTTCTGCGCAAAATGGCCGATCAGGGAATGGGTTGG
CCACTGATCGAAGGGACCGGCACCATGCTGGGGTGGTTCGTCATTGAAAGCGTAAACATCACCAAAAGCGTTTTTTTCCG
CGACGGCGCCGCCCGGCGTATTGAATTTACCCTGGCGCTAAAACGCATCGATCCGCCGAAGCCGGGCGGCAAGATGGGAG
ACATCATCGCAATGGTGGATGGGCTATGA

Upstream 100 bases:

>100_bases
CAGCTGGCAAAACTGGTGGTGCAAGAACTGGACAGGCGCGAACGGCAGAATGCCGCCAGAAATCGCAGCAGCCTGCGCGA
TATTGACTAAGGAGACGCTT

Downstream 100 bases:

>100_bases
CGCCTGCGCTGAATGGCCAGCCCACGCCGGAATACCGCATCACGCTGGATGGTGTTGACGTCTCATCGCAGCTGAAAAAC
CGGTTAATCAGCTTCACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Tail Protein; Phage P2 GpU; Phage-Related Tail Protein; Phage P2 GpU Family Protein; Phage Protein U; Phage Tail Protein U; Fels-2 Prophage Protein; Tail Fiber Protein; Phage-Related Protein; Phage Tail Assembly Protein; Bacteriophage Tail Fiber Protein U; Bacteriophage Tail Protein U; Phage P2 GpU Protein; Prophage Tail Protein; Phage-Like Tail Protein; Bacteriophage P2 Phage-Related Tail U Protein; Tail Assembly Protein; Bacteriophage Tail Protein; Tail Fiber Protein Of Prophage; Bacteriophage P2 Tail Protein GPU; Phage Tail; Tail Protein; Tail Protein U

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MMMTLGLFVFSLKTLPYQDLQQSISWRHPTSSRVGQRPASQFIGVGDEAVTLNGVLLPELTGGRFTLFFLRKMADQGMGW
PLIEGTGTMLGWFVIESVNITKSVFFRDGAARRIEFTLALKRIDPPKPGGKMGDIIAMVDGL

Sequences:

>Translated_142_residues
MMMTLGLFVFSLKTLPYQDLQQSISWRHPTSSRVGQRPASQFIGVGDEAVTLNGVLLPELTGGRFTLFFLRKMADQGMGW
PLIEGTGTMLGWFVIESVNITKSVFFRDGAARRIEFTLALKRIDPPKPGGKMGDIIAMVDGL
>Mature_142_residues
MMMTLGLFVFSLKTLPYQDLQQSISWRHPTSSRVGQRPASQFIGVGDEAVTLNGVLLPELTGGRFTLFFLRKMADQGMGW
PLIEGTGTMLGWFVIESVNITKSVFFRDGAARRIEFTLALKRIDPPKPGGKMGDIIAMVDGL

Specific function: Unknown

COG id: COG3499

COG function: function code R; Phage protein U

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15695; Mature: 15695

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMTLGLFVFSLKTLPYQDLQQSISWRHPTSSRVGQRPASQFIGVGDEAVTLNGVLLPEL
CEEEHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHCCCCHHHHCCCCCCEEEECCEEECCC
TGGRFTLFFLRKMADQGMGWPLIEGTGTMLGWFVIESVNITKSVFFRDGAARRIEFTLAL
CCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEHHHCCCCCHHEEEECCCCCCEEEEEEEE
KRIDPPKPGGKMGDIIAMVDGL
ECCCCCCCCCCCCCEEEEECCC
>Mature Secondary Structure
MMMTLGLFVFSLKTLPYQDLQQSISWRHPTSSRVGQRPASQFIGVGDEAVTLNGVLLPEL
CEEEHHHHHHHHHCCCHHHHHHHCCCCCCCCCHHCCCCHHHHCCCCCCEEEECCEEECCC
TGGRFTLFFLRKMADQGMGWPLIEGTGTMLGWFVIESVNITKSVFFRDGAARRIEFTLAL
CCCCHHHHHHHHHHHCCCCCEEECCCCCEEEEHHHCCCCCHHEEEECCCCCCEEEEEEEE
KRIDPPKPGGKMGDIIAMVDGL
ECCCCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA