Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238921003

Identifier: 238921003

GI number: 238921003

Start: 3015728

End: 3016330

Strand: Direct

Name: 238921003

Synonym: NT01EI_3133

Alternate gene names: NA

Gene position: 3015728-3016330 (Clockwise)

Preceding gene: 238921002

Following gene: 238921004

Centisome position: 79.1

GC content: 58.21

Gene sequence:

>603_bases
TTGCTCCCCGATAACGCCAGCCCGCTGGAGCATAATCTGGCACAAACCGGCAGCATGATTGAACAGATCCCCGTTCCGCT
GCGCAGCCTGTGGCAAGCTGATTGCTGCCCCTCCCCCCTCTTGCCCTATCTGGCATGGGCGTTCTCCGTCGACCGCTGGG
ATGAACACTGGCCAGAAGAGACAAAGCGGCAGGTGATCGCCGCCTCTTTCTACATCCATCAACACAAAGGCACCATTGGC
GCACTACAGCGCGCGGTGGAACCGTTCGGTTTCCTTATCCGGGTGACCGAATGGTGGCAAGAGCAACCGGAAGGCATTCC
CGGTACTTTCGCACTGGAAGTCGGCGTGCGCGAACAAGGCATCACCGAACAGATGTATGCCGAGCTGGAGCGGCTGATCG
ATGATGCCAAACCCTGTTCACGCCACTTAATTGGGCTGGCTATCAGCCTGCAGATCAACGGGTATCTCTGGTTCGCCGCG
ACGAGCTACACCGGAGATACGCTTACCATTTATCCCTTTATCCCCGACCACGGATACAGCACAGGCCGTGACTACCGTGG
AGCCGCGCTACACCTGATTGATACGCTGAGGATCGCCCCATGA

Upstream 100 bases:

>100_bases
CTGATTGCGCCTGATGCTGACGTCATTATCAGCAGAACGCAGGCCAGCTTCTGCACCGAATGGCAGATCGCTATCGGAGG
CAACGATGAATAGCCGTTCC

Downstream 100 bases:

>100_bases
GCGCCACCTATTTCACACTCTTAACCACTGTCGGTGAAACCGCGCTGGCGAGTGCCACCACACAGGACTCTCCACTACGC
CTGACGCAGATGGCCGTAGG

Product: tail protein I (GpI)

Products: NA

Alternate protein names: Tail Protein I; Phage Tail Protein; Phage-Related Tail Protein; Bacteriophage P2-Related Tail Formation Protein; Bacteriophage Protein; Pyocin R2_PP Tail Formation Protein GpI; Tail Protein I Prophage; Phage P2 Baseplate Assembly GpI-Like Protein; Prophage Tail Protein; Phage-Related Tail Protein I; Phage Tail-Like Protein; Bacteriophage Tail Protein I; Tail Formation-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPI; Bacteriophage P2-Related Tail Formation Protein GpI; Bacteriophage Tail Formation Protein I

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MLPDNASPLEHNLAQTGSMIEQIPVPLRSLWQADCCPSPLLPYLAWAFSVDRWDEHWPEETKRQVIAASFYIHQHKGTIG
ALQRAVEPFGFLIRVTEWWQEQPEGIPGTFALEVGVREQGITEQMYAELERLIDDAKPCSRHLIGLAISLQINGYLWFAA
TSYTGDTLTIYPFIPDHGYSTGRDYRGAALHLIDTLRIAP

Sequences:

>Translated_200_residues
MLPDNASPLEHNLAQTGSMIEQIPVPLRSLWQADCCPSPLLPYLAWAFSVDRWDEHWPEETKRQVIAASFYIHQHKGTIG
ALQRAVEPFGFLIRVTEWWQEQPEGIPGTFALEVGVREQGITEQMYAELERLIDDAKPCSRHLIGLAISLQINGYLWFAA
TSYTGDTLTIYPFIPDHGYSTGRDYRGAALHLIDTLRIAP
>Mature_200_residues
MLPDNASPLEHNLAQTGSMIEQIPVPLRSLWQADCCPSPLLPYLAWAFSVDRWDEHWPEETKRQVIAASFYIHQHKGTIG
ALQRAVEPFGFLIRVTEWWQEQPEGIPGTFALEVGVREQGITEQMYAELERLIDDAKPCSRHLIGLAISLQINGYLWFAA
TSYTGDTLTIYPFIPDHGYSTGRDYRGAALHLIDTLRIAP

Specific function: Unknown

COG id: COG4385

COG function: function code R; Bacteriophage P2-related tail formation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22633; Mature: 22633

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPDNASPLEHNLAQTGSMIEQIPVPLRSLWQADCCPSPLLPYLAWAFSVDRWDEHWPEE
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHH
TKRQVIAASFYIHQHKGTIGALQRAVEPFGFLIRVTEWWQEQPEGIPGTFALEVGVREQG
HHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
ITEQMYAELERLIDDAKPCSRHLIGLAISLQINGYLWFAATSYTGDTLTIYPFIPDHGYS
CHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCC
TGRDYRGAALHLIDTLRIAP
CCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MLPDNASPLEHNLAQTGSMIEQIPVPLRSLWQADCCPSPLLPYLAWAFSVDRWDEHWPEE
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHH
TKRQVIAASFYIHQHKGTIGALQRAVEPFGFLIRVTEWWQEQPEGIPGTFALEVGVREQG
HHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
ITEQMYAELERLIDDAKPCSRHLIGLAISLQINGYLWFAATSYTGDTLTIYPFIPDHGYS
CHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCC
TGRDYRGAALHLIDTLRIAP
CCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA