Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238921003
Identifier: 238921003
GI number: 238921003
Start: 3015728
End: 3016330
Strand: Direct
Name: 238921003
Synonym: NT01EI_3133
Alternate gene names: NA
Gene position: 3015728-3016330 (Clockwise)
Preceding gene: 238921002
Following gene: 238921004
Centisome position: 79.1
GC content: 58.21
Gene sequence:
>603_bases TTGCTCCCCGATAACGCCAGCCCGCTGGAGCATAATCTGGCACAAACCGGCAGCATGATTGAACAGATCCCCGTTCCGCT GCGCAGCCTGTGGCAAGCTGATTGCTGCCCCTCCCCCCTCTTGCCCTATCTGGCATGGGCGTTCTCCGTCGACCGCTGGG ATGAACACTGGCCAGAAGAGACAAAGCGGCAGGTGATCGCCGCCTCTTTCTACATCCATCAACACAAAGGCACCATTGGC GCACTACAGCGCGCGGTGGAACCGTTCGGTTTCCTTATCCGGGTGACCGAATGGTGGCAAGAGCAACCGGAAGGCATTCC CGGTACTTTCGCACTGGAAGTCGGCGTGCGCGAACAAGGCATCACCGAACAGATGTATGCCGAGCTGGAGCGGCTGATCG ATGATGCCAAACCCTGTTCACGCCACTTAATTGGGCTGGCTATCAGCCTGCAGATCAACGGGTATCTCTGGTTCGCCGCG ACGAGCTACACCGGAGATACGCTTACCATTTATCCCTTTATCCCCGACCACGGATACAGCACAGGCCGTGACTACCGTGG AGCCGCGCTACACCTGATTGATACGCTGAGGATCGCCCCATGA
Upstream 100 bases:
>100_bases CTGATTGCGCCTGATGCTGACGTCATTATCAGCAGAACGCAGGCCAGCTTCTGCACCGAATGGCAGATCGCTATCGGAGG CAACGATGAATAGCCGTTCC
Downstream 100 bases:
>100_bases GCGCCACCTATTTCACACTCTTAACCACTGTCGGTGAAACCGCGCTGGCGAGTGCCACCACACAGGACTCTCCACTACGC CTGACGCAGATGGCCGTAGG
Product: tail protein I (GpI)
Products: NA
Alternate protein names: Tail Protein I; Phage Tail Protein; Phage-Related Tail Protein; Bacteriophage P2-Related Tail Formation Protein; Bacteriophage Protein; Pyocin R2_PP Tail Formation Protein GpI; Tail Protein I Prophage; Phage P2 Baseplate Assembly GpI-Like Protein; Prophage Tail Protein; Phage-Related Tail Protein I; Phage Tail-Like Protein; Bacteriophage Tail Protein I; Tail Formation-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPI; Bacteriophage P2-Related Tail Formation Protein GpI; Bacteriophage Tail Formation Protein I
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MLPDNASPLEHNLAQTGSMIEQIPVPLRSLWQADCCPSPLLPYLAWAFSVDRWDEHWPEETKRQVIAASFYIHQHKGTIG ALQRAVEPFGFLIRVTEWWQEQPEGIPGTFALEVGVREQGITEQMYAELERLIDDAKPCSRHLIGLAISLQINGYLWFAA TSYTGDTLTIYPFIPDHGYSTGRDYRGAALHLIDTLRIAP
Sequences:
>Translated_200_residues MLPDNASPLEHNLAQTGSMIEQIPVPLRSLWQADCCPSPLLPYLAWAFSVDRWDEHWPEETKRQVIAASFYIHQHKGTIG ALQRAVEPFGFLIRVTEWWQEQPEGIPGTFALEVGVREQGITEQMYAELERLIDDAKPCSRHLIGLAISLQINGYLWFAA TSYTGDTLTIYPFIPDHGYSTGRDYRGAALHLIDTLRIAP >Mature_200_residues MLPDNASPLEHNLAQTGSMIEQIPVPLRSLWQADCCPSPLLPYLAWAFSVDRWDEHWPEETKRQVIAASFYIHQHKGTIG ALQRAVEPFGFLIRVTEWWQEQPEGIPGTFALEVGVREQGITEQMYAELERLIDDAKPCSRHLIGLAISLQINGYLWFAA TSYTGDTLTIYPFIPDHGYSTGRDYRGAALHLIDTLRIAP
Specific function: Unknown
COG id: COG4385
COG function: function code R; Bacteriophage P2-related tail formation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22633; Mature: 22633
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPDNASPLEHNLAQTGSMIEQIPVPLRSLWQADCCPSPLLPYLAWAFSVDRWDEHWPEE CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHH TKRQVIAASFYIHQHKGTIGALQRAVEPFGFLIRVTEWWQEQPEGIPGTFALEVGVREQG HHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC ITEQMYAELERLIDDAKPCSRHLIGLAISLQINGYLWFAATSYTGDTLTIYPFIPDHGYS CHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCC TGRDYRGAALHLIDTLRIAP CCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MLPDNASPLEHNLAQTGSMIEQIPVPLRSLWQADCCPSPLLPYLAWAFSVDRWDEHWPEE CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHH TKRQVIAASFYIHQHKGTIGALQRAVEPFGFLIRVTEWWQEQPEGIPGTFALEVGVREQG HHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC ITEQMYAELERLIDDAKPCSRHLIGLAISLQINGYLWFAATSYTGDTLTIYPFIPDHGYS CHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEEEEEEEEEEECCCCCEEEEEECCCCCCCC TGRDYRGAALHLIDTLRIAP CCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA