Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
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Accession | NC_012779 |
Length | 3,812,315 |
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The map label for this gene is 238920996
Identifier: 238920996
GI number: 238920996
Start: 3011874
End: 3012332
Strand: Direct
Name: 238920996
Synonym: NT01EI_3126
Alternate gene names: NA
Gene position: 3011874-3012332 (Clockwise)
Preceding gene: 238920995
Following gene: 238920997
Centisome position: 79.0
GC content: 57.3
Gene sequence:
>459_bases ATGCACAAAGCGCAGCTCATCCGTGAACTGCTGGCTGCCAGCGTCCCGCACTTGCGGCAAAACCCCGATACGCTGCGGGT CTTTATCAATAAGGGTCGGATCGTCGCCACCGCCGGGCACAGCACCAGTTTTGAATATCAGTACACGCTGGAGTTGTTAA TCACCGACTACGCTGACTCCTTTGACACGCTGGTGGTGCCACTGGTCGGCTGGGTGTCGCTTCACCAGCAGGAAGCCTTT GCCAACAGTAGCCTGCGTGAGCAGGCGTTCCAGTTTGAAGCTGAAGCCATCGACCACCAGAGCTACGATATCAGCATCAA ACTGGCGCTGACCGAGCGCGTCATTGTGCGAAGCAGCGACGACGGGCTAGAAGCAAAGCACTGCAACGACCAGCTGCCGG AAGGCGGTTACAACGGCTGGGAAATCGCCTGTCGCGGTGAAACTATTGTGAGTACCTGA
Upstream 100 bases:
>100_bases GTGCTGGATTAAAATCTCACGCCACTGCTGCAAACCGAAAACGCATGGCACCCGTGCACCGCACAGGTACATATGATTCT CCACTGTCAGGAGCATACTG
Downstream 100 bases:
>100_bases TGAATGATGACCTGCTGCAACTTCATCGCTGGGCCGATGGCCTGCTGGCAAAACTCTCCCCGGCAAGCCGAACCCAACTG GCGCGTGAAATCGCCCGCCG
Product: P2 phage tail completion protein R (GpR)
Products: NA
Alternate protein names: Tail Completion Protein R; P2 Phage Tail Completion Protein R; Phage Tail Completion Protein R; Phage Tail Protein; Bacteriophage Tail Completion Protein R; Bacteriophage P2 Tail Completion Protein GPR; Phage-Related Tail Completion Protein; Tail Completion Protein; Bacteriophage Tail Completion Protein GpR-Like Protein; Phage-Related Tail Protein; P2 Phage Tail Completion Protein R GpR; Prophage Tail Completion Protein; Tail Completion-Like Protein; Bacteriophage Tail Completion-Like Protein; Phage Tail Completion Protein GpR; Phage Tail Completion R Family Protein; Bacteriophage P2 Tail Completion Protein GpR
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MHKAQLIRELLAASVPHLRQNPDTLRVFINKGRIVATAGHSTSFEYQYTLELLITDYADSFDTLVVPLVGWVSLHQQEAF ANSSLREQAFQFEAEAIDHQSYDISIKLALTERVIVRSSDDGLEAKHCNDQLPEGGYNGWEIACRGETIVST
Sequences:
>Translated_152_residues MHKAQLIRELLAASVPHLRQNPDTLRVFINKGRIVATAGHSTSFEYQYTLELLITDYADSFDTLVVPLVGWVSLHQQEAF ANSSLREQAFQFEAEAIDHQSYDISIKLALTERVIVRSSDDGLEAKHCNDQLPEGGYNGWEIACRGETIVST >Mature_152_residues MHKAQLIRELLAASVPHLRQNPDTLRVFINKGRIVATAGHSTSFEYQYTLELLITDYADSFDTLVVPLVGWVSLHQQEAF ANSSLREQAFQFEAEAIDHQSYDISIKLALTERVIVRSSDDGLEAKHCNDQLPEGGYNGWEIACRGETIVST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17049; Mature: 17049
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKAQLIRELLAASVPHLRQNPDTLRVFINKGRIVATAGHSTSFEYQYTLELLITDYADS CCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEECCCCCEEEEEEEEEEEECCCCC FDTLVVPLVGWVSLHQQEAFANSSLREQAFQFEAEAIDHQSYDISIKLALTERVIVRSSD HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEECCC DGLEAKHCNDQLPEGGYNGWEIACRGETIVST CCCCCCCCCCCCCCCCCCCCEEEECCCEEECC >Mature Secondary Structure MHKAQLIRELLAASVPHLRQNPDTLRVFINKGRIVATAGHSTSFEYQYTLELLITDYADS CCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEECCCCCEEEEEEEEEEEECCCCC FDTLVVPLVGWVSLHQQEAFANSSLREQAFQFEAEAIDHQSYDISIKLALTERVIVRSSD HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEECCC DGLEAKHCNDQLPEGGYNGWEIACRGETIVST CCCCCCCCCCCCCCCCCCCCEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA