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The map label for this gene is yadS [H]

Identifier: 238920973

GI number: 238920973

Start: 2992909

End: 2993520

Strand: Direct

Name: yadS [H]

Synonym: NT01EI_3103

Alternate gene names: 238920973

Gene position: 2992909-2993520 (Clockwise)

Preceding gene: 238920972

Following gene: 238920976

Centisome position: 78.51

GC content: 63.89

Gene sequence:

>612_bases
ATGCTGGTTTACTGGTTGGATATTTTGGGGACGGCCGTCTTTGCCATCTCTGGCGTGTTGCTGGCGGGCAAGCTGCGCAT
GGACCCTTTTGGGGTACTGGTACTGGGGGTGGTCACCGCCGTAGGCGGCGGCACCATCCGCGATATGGCGCTGGATAACG
GCCCGGCCTTCTGGGTACGCGACCCCACCGATCTGGTGGTGGCGATGGTGACCTGTCTGCTTACCATTGCGCTGGTGCGC
CAGCCACGCCGCCTGCCCGGCTGGGTGCTACCGGTGCTGGACGCCATCGGTCTGGCCGTCTTCGTCGGCATTGGGGTCAA
TAAAGCCTTCGCCGCCAGTGCCGGTCCGATGATCGCCGTCTGCATGGGGGTGATCACCGGCGTGGGCGGCGGCATTATTC
GCGACGTGCTGGCGCGGGAGATCCCGATGATCCTGCGCACTGAAATCTACGCCACCGCCTGCATCATCGGGGGTATCGTT
CACGTCACCGCCTATGTCACCTTTGGCATGGCGCTACAGCACGCCATGATGCTGGGCATGGCGATCACGCTGGGCATCCG
TCTGGCGGCCATCCGCTGGCATCTCAAGCTGCCGACCTTCACGCTGGAGTGA

Upstream 100 bases:

>100_bases
GCCGCTGGAATATGATTCCCAATAAAAACAATAAGATCACAAATTATTGTCATTACAACCAACCCTGCCGGAATCCGGGG
GCGTTAAAGAGGTAAAGGCT

Downstream 100 bases:

>100_bases
TCCCCGGGCGCCGCTGATAAAAAAATAGCGCCTTCCACAGGAAGGCGCCACGAGAGATCCCATACTCCGGCTTACGCTTA
GATACTGAACGATGATCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDNGPAFWVRDPTDLVVAMVTCLLTIALVR
QPRRLPGWVLPVLDAIGLAVFVGIGVNKAFAASAGPMIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
HVTAYVTFGMALQHAMMLGMAITLGIRLAAIRWHLKLPTFTLE

Sequences:

>Translated_203_residues
MLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDNGPAFWVRDPTDLVVAMVTCLLTIALVR
QPRRLPGWVLPVLDAIGLAVFVGIGVNKAFAASAGPMIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
HVTAYVTFGMALQHAMMLGMAITLGIRLAAIRWHLKLPTFTLE
>Mature_203_residues
MLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDNGPAFWVRDPTDLVVAMVTCLLTIALVR
QPRRLPGWVLPVLDAIGLAVFVGIGVNKAFAASAGPMIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
HVTAYVTFGMALQHAMMLGMAITLGIRLAAIRWHLKLPTFTLE

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=203, Percent_Identity=86.6995073891626, Blast_Score=324, Evalue=3e-90,
Organism=Escherichia coli, GI87082304, Length=177, Percent_Identity=38.4180790960452, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 21451; Mature: 21451

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDNGPAFWVR
CEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHEECCCCEEEEE
DPTDLVVAMVTCLLTIALVRQPRRLPGWVLPVLDAIGLAVFVGIGVNKAFAASAGPMIAV
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHH
CMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHVTAYVTFGMALQHAMMLGM
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AITLGIRLAAIRWHLKLPTFTLE
HHHHHHHHHHHEEEEECCCEECC
>Mature Secondary Structure
MLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALDNGPAFWVR
CEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHEECCCCEEEEE
DPTDLVVAMVTCLLTIALVRQPRRLPGWVLPVLDAIGLAVFVGIGVNKAFAASAGPMIAV
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHH
CMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHVTAYVTFGMALQHAMMLGM
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AITLGIRLAAIRWHLKLPTFTLE
HHHHHHHHHHHEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]