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The map label for this gene is yeiE [H]

Identifier: 238920960

GI number: 238920960

Start: 2977645

End: 2978523

Strand: Direct

Name: yeiE [H]

Synonym: NT01EI_3090

Alternate gene names: 238920960

Gene position: 2977645-2978523 (Clockwise)

Preceding gene: 238920957

Following gene: 238920961

Centisome position: 78.11

GC content: 60.3

Gene sequence:

>879_bases
ATGAACATCACCTTCAAACAGCTGCGCGTCTTTGTTGCCATTGCCCGCAGTGGAACCCTGACCCAGGCGGCATCGCTGCT
GTTTATGACCAAGGGAGCCCTTTCGCAAACCCTGAGTGAGTTGGAAAACCAGCTTGGAGTGCGGCTGTTTGAGCGCCAGC
ACGCCCGCCTGCTGCTGAACCATGAAGGACAACGCCTACTGCCGGTGGCCGACGAGCTGCTGACCCGGATGCAGGGAGTG
GAGGGCCTGTTCAACAACGGCAACGGCGACACCCGGCTGATGGTCGGCTGCACCAAGACCATTGGCAGCTATCTGCTGCC
GGAGCTGCTCGGCGCATTCCAGCTGCGCTACGGCTGGCTCCCTCTGCCGATCATCGCCAATACCCAAGGTATTGCCGGCA
TGGTGGCCGGATTTGAGCTGGATGTGGCGCTGCTGGAGGGGCCGGTTACCGACCCGGCATTAATCTGCCAGCCATGGCTG
GAGGATGAGATGGTAGTGGTCGCGAGCCTTGAACACCCGCTGGCCGGACGGGGCCCGCTAAGCTATACACAGCTCAGCCT
GGAACGCTGGCTGCTGCGCGAGGCAGGTTCAGCCAGCCGGGCATTCTTTGACCACCAGATGGCGCCCCACCTGGATAATC
CACAGGTGGGGCTATCGCTGGACGCCTTTGATGCCATCCTGGCCTGTGTCAAAAACAATCTGGGTATTACCTTCATTTCC
CGCCGCATGCTGGAGCAGCCGCTGTATGCCGGGCAGTTCTGTATTCTCCCCTGCGAGCAGCGCTTTAGCCGCCGCTTCTC
CCTGTGCCTGCAGCGCAGCAAGTATATCTCCCCCACCCTGAATCTATGGCTAGAATTTTGTCGTCATTGGTCCGCTTAG

Upstream 100 bases:

>100_bases
CCTCTACTTTTTTCATTGTTTCTATGGCGCATACTATAGCCACAGGATATTATTTAAAAAATCAATAAATTTATTACATC
TGGTTTAGGAAAACTAAACA

Downstream 100 bases:

>100_bases
GTCCGCGCGCCCTACACCCGTGTAACGATTACTGGCCGCATCTGCCTGAAGCTCTTTGTATTACAAATAAATCCATACTG
ACGTTGAATGATCTATACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MNITFKQLRVFVAIARSGTLTQAASLLFMTKGALSQTLSELENQLGVRLFERQHARLLLNHEGQRLLPVADELLTRMQGV
EGLFNNGNGDTRLMVGCTKTIGSYLLPELLGAFQLRYGWLPLPIIANTQGIAGMVAGFELDVALLEGPVTDPALICQPWL
EDEMVVVASLEHPLAGRGPLSYTQLSLERWLLREAGSASRAFFDHQMAPHLDNPQVGLSLDAFDAILACVKNNLGITFIS
RRMLEQPLYAGQFCILPCEQRFSRRFSLCLQRSKYISPTLNLWLEFCRHWSA

Sequences:

>Translated_292_residues
MNITFKQLRVFVAIARSGTLTQAASLLFMTKGALSQTLSELENQLGVRLFERQHARLLLNHEGQRLLPVADELLTRMQGV
EGLFNNGNGDTRLMVGCTKTIGSYLLPELLGAFQLRYGWLPLPIIANTQGIAGMVAGFELDVALLEGPVTDPALICQPWL
EDEMVVVASLEHPLAGRGPLSYTQLSLERWLLREAGSASRAFFDHQMAPHLDNPQVGLSLDAFDAILACVKNNLGITFIS
RRMLEQPLYAGQFCILPCEQRFSRRFSLCLQRSKYISPTLNLWLEFCRHWSA
>Mature_292_residues
MNITFKQLRVFVAIARSGTLTQAASLLFMTKGALSQTLSELENQLGVRLFERQHARLLLNHEGQRLLPVADELLTRMQGV
EGLFNNGNGDTRLMVGCTKTIGSYLLPELLGAFQLRYGWLPLPIIANTQGIAGMVAGFELDVALLEGPVTDPALICQPWL
EDEMVVVASLEHPLAGRGPLSYTQLSLERWLLREAGSASRAFFDHQMAPHLDNPQVGLSLDAFDAILACVKNNLGITFIS
RRMLEQPLYAGQFCILPCEQRFSRRFSLCLQRSKYISPTLNLWLEFCRHWSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=289, Percent_Identity=37.0242214532872, Blast_Score=193, Evalue=1e-50,
Organism=Escherichia coli, GI157672245, Length=231, Percent_Identity=29.4372294372294, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788296, Length=246, Percent_Identity=29.2682926829268, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI145693105, Length=304, Percent_Identity=26.6447368421053, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1787806, Length=248, Percent_Identity=25.4032258064516, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI87082132, Length=285, Percent_Identity=23.859649122807, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87081904, Length=216, Percent_Identity=31.9444444444444, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787601, Length=301, Percent_Identity=22.9235880398671, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1786401, Length=286, Percent_Identity=24.8251748251748, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788706, Length=272, Percent_Identity=24.2647058823529, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788887, Length=185, Percent_Identity=29.7297297297297, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1788748, Length=217, Percent_Identity=25.8064516129032, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789173, Length=249, Percent_Identity=24.8995983935743, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790399, Length=204, Percent_Identity=26.4705882352941, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1790262, Length=252, Percent_Identity=25, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32616; Mature: 32616

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITFKQLRVFVAIARSGTLTQAASLLFMTKGALSQTLSELENQLGVRLFERQHARLLLN
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
HEGQRLLPVADELLTRMQGVEGLFNNGNGDTRLMVGCTKTIGSYLLPELLGAFQLRYGWL
CCCCEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCC
PLPIIANTQGIAGMVAGFELDVALLEGPVTDPALICQPWLEDEMVVVASLEHPLAGRGPL
CCCEEECCCCHHHHHHCCEEEEHEECCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCC
SYTQLSLERWLLREAGSASRAFFDHQMAPHLDNPQVGLSLDAFDAILACVKNNLGITFIS
HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
RRMLEQPLYAGQFCILPCEQRFSRRFSLCLQRSKYISPTLNLWLEFCRHWSA
HHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNITFKQLRVFVAIARSGTLTQAASLLFMTKGALSQTLSELENQLGVRLFERQHARLLLN
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
HEGQRLLPVADELLTRMQGVEGLFNNGNGDTRLMVGCTKTIGSYLLPELLGAFQLRYGWL
CCCCEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCC
PLPIIANTQGIAGMVAGFELDVALLEGPVTDPALICQPWLEDEMVVVASLEHPLAGRGPL
CCCEEECCCCHHHHHHCCEEEEHEECCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCCCC
SYTQLSLERWLLREAGSASRAFFDHQMAPHLDNPQVGLSLDAFDAILACVKNNLGITFIS
HHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH
RRMLEQPLYAGQFCILPCEQRFSRRFSLCLQRSKYISPTLNLWLEFCRHWSA
HHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]