| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is ycjY [C]
Identifier: 238920957
GI number: 238920957
Start: 2974871
End: 2975731
Strand: Direct
Name: ycjY [C]
Synonym: NT01EI_3087
Alternate gene names: 238920957
Gene position: 2974871-2975731 (Clockwise)
Preceding gene: 238920955
Following gene: 238920960
Centisome position: 78.03
GC content: 53.77
Gene sequence:
>861_bases ATGCAAATATCAACCCATACCTTGCCTAACGGTATCGCCCTGACCTGGTATCATCCCTCTGAGATTACCGCTTCTCCGGT GATTATTTTATGTCATGGATTTTGTGGTATACAGCAAGCACTATTACCTGCGTTTGCGGAAACCTTTGCGCAGGCTGGAT TCTCTGCACTGACCTTTGATTATCGCGGATTCGGTGCCAGTGCGGGAGAGCGTGGTCGCCTGGTTCCCTCTATGCAAACT GCGGATATTACGAGCGTGATTGATTGGGCCGTGGCCCAGTCGGCTATCGATGCCGAGCGCATTGGCCTGTGGGGCACCTC ATTTGGCGGCTGTCATGTCTTTGCTGCTGCTGCCGGTGATGTCCGGGTAAAGTGTATTGTGAGCCAGCTGGCCTTTGCTG ACGGTGAGTCAATGGTTACCGGGCATATGACGAAAGAGGAGAAGGATACCTTTATCGCCTCTCTGCTGCGGATGGAGGAG AAAAAGAGCGCCAGCGGTAAAGAGATGATGGTGGCTGTTACGCGGGTTCTGAGCGACGAGGAGTCCAAAGCCTTCTTTGC CGACTATCGGCTGCGTTATCCACAGATGGATATCAAAATTCCCTTTCTGACAGTACTGGAAACCGTTCGTTATCAGCCGG CGCGTTATGCGGCGCAAGTGCAGAGCCCCACGCTGGTGGTGGTGGCAGAACAGGATACGGTAAATCCGCCACAGCAGGGG ATCGCTCTGTTTACCGCCGCGGGTGCCGCTACCAAGCGACTGTATGTCGAAGAGGGGGCGCACCATTACGATATGTATGA TGGCGAGCATTTCTATCGCTCTATCGCCGAGCAGCTGGCATGGTTTAACGACCATCTGTAA
Upstream 100 bases:
>100_bases GAACTAAACGATGCCATAGCACTTATTCTATTTTTCTTGAACACCTATTGTATTTTGGCAGATAGTAGCATTCCTAATAA AAAATGGATCGCGTCTGATA
Downstream 100 bases:
>100_bases GTGCCTCAGCAGCCCAACAAAACGGCCTTACCGCCGCCCGGTGGTAAGGCGTTCCCGTTGAGTCTTGTTGAATAAATCAC ACTTTGAGCGGAGCTCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MQISTHTLPNGIALTWYHPSEITASPVIILCHGFCGIQQALLPAFAETFAQAGFSALTFDYRGFGASAGERGRLVPSMQT ADITSVIDWAVAQSAIDAERIGLWGTSFGGCHVFAAAAGDVRVKCIVSQLAFADGESMVTGHMTKEEKDTFIASLLRMEE KKSASGKEMMVAVTRVLSDEESKAFFADYRLRYPQMDIKIPFLTVLETVRYQPARYAAQVQSPTLVVVAEQDTVNPPQQG IALFTAAGAATKRLYVEEGAHHYDMYDGEHFYRSIAEQLAWFNDHL
Sequences:
>Translated_286_residues MQISTHTLPNGIALTWYHPSEITASPVIILCHGFCGIQQALLPAFAETFAQAGFSALTFDYRGFGASAGERGRLVPSMQT ADITSVIDWAVAQSAIDAERIGLWGTSFGGCHVFAAAAGDVRVKCIVSQLAFADGESMVTGHMTKEEKDTFIASLLRMEE KKSASGKEMMVAVTRVLSDEESKAFFADYRLRYPQMDIKIPFLTVLETVRYQPARYAAQVQSPTLVVVAEQDTVNPPQQG IALFTAAGAATKRLYVEEGAHHYDMYDGEHFYRSIAEQLAWFNDHL >Mature_286_residues MQISTHTLPNGIALTWYHPSEITASPVIILCHGFCGIQQALLPAFAETFAQAGFSALTFDYRGFGASAGERGRLVPSMQT ADITSVIDWAVAQSAIDAERIGLWGTSFGGCHVFAAAAGDVRVKCIVSQLAFADGESMVTGHMTKEEKDTFIASLLRMEE KKSASGKEMMVAVTRVLSDEESKAFFADYRLRYPQMDIKIPFLTVLETVRYQPARYAAQVQSPTLVVVAEQDTVNPPQQG IALFTAAGAATKRLYVEEGAHHYDMYDGEHFYRSIAEQLAWFNDHL
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ycjY [H]
Homologues:
Organism=Escherichia coli, GI221142683, Length=271, Percent_Identity=26.5682656826568, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 31416; Mature: 31416
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQISTHTLPNGIALTWYHPSEITASPVIILCHGFCGIQQALLPAFAETFAQAGFSALTFD CCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEE YRGFGASAGERGRLVPSMQTADITSVIDWAVAQSAIDAERIGLWGTSFGGCHVFAAAAGD ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEECCCC VRVKCIVSQLAFADGESMVTGHMTKEEKDTFIASLLRMEEKKSASGKEMMVAVTRVLSDE EEHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC ESKAFFADYRLRYPQMDIKIPFLTVLETVRYQPARYAAQVQSPTLVVVAEQDTVNPPQQG CCCEEEEHHEEECCCCEEECHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCCCHHC IALFTAAGAATKRLYVEEGAHHYDMYDGEHFYRSIAEQLAWFNDHL EEEEEECCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQISTHTLPNGIALTWYHPSEITASPVIILCHGFCGIQQALLPAFAETFAQAGFSALTFD CCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEE YRGFGASAGERGRLVPSMQTADITSVIDWAVAQSAIDAERIGLWGTSFGGCHVFAAAAGD ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEEEECCCC VRVKCIVSQLAFADGESMVTGHMTKEEKDTFIASLLRMEEKKSASGKEMMVAVTRVLSDE EEHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCC ESKAFFADYRLRYPQMDIKIPFLTVLETVRYQPARYAAQVQSPTLVVVAEQDTVNPPQQG CCCEEEEHHEEECCCCEEECHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCCCCHHC IALFTAAGAATKRLYVEEGAHHYDMYDGEHFYRSIAEQLAWFNDHL EEEEEECCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1916281 [H]