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The map label for this gene is recN [H]

Identifier: 238920936

GI number: 238920936

Start: 2958766

End: 2960427

Strand: Direct

Name: recN [H]

Synonym: NT01EI_3064

Alternate gene names: 238920936

Gene position: 2958766-2960427 (Clockwise)

Preceding gene: 238920935

Following gene: 238920937

Centisome position: 77.61

GC content: 64.86

Gene sequence:

>1662_bases
ATGCTGACGCAGCTGACCGTCGCCAACTTTGCCATCGTCCGTGAACTGGAAGTCGACTTCCAGCGCGGAATGACCGCCAT
TACCGGTGAAACCGGTGCCGGGAAATCCATCGCCATCGATGCCCTGACCCTGTGTCTGGGGGGGCGCAGCGAAGCCGCTA
TGGTACGCATGAATATGCCGCGCGCCGATATCTGCGCCCGCTTCTCGCTGGCCGATACCCCCTCTGCCCGCGCCTGGCTG
GAGTCCAACCAGCTCGACGACAGCAACGAATGCCTGCTGCGCCGGGTGATCAGCGCCGACGGACGTTCACGCGGCTTTAT
CAACGGTACCGCGGTTCCCCTGTCCCAGCTGCGCGATCTCGGGCAACTGCTGATCCAAATCCACGGTCAGCACGCGCACC
AGCTGCTGCTGAAGCCGGAGCACCAGCGCCACCTGCTGGATGCCTACGGGCAGCAGCACACCCTGCTGCACGAGATGCGG
GCTGCCTACCGCCAATGGCACCACAGCGTGCGCCTGCTGGCCGACCATCGCCGCCAGATCAGCGATCGCGAGGCGCGCCG
CGAGCTGCTGCAGTACCAGCTAAAAGAGCTGAATGAGTTTGCACCGCAGCCCGGCGAGTACGAACAGATCGACGAGGAGT
ACAAGCGCCAGGCCAACAGCGGCCAGCTGCTCAGCCTGAGCCAGCAGATCCTGGCGGCGCTCTGCGACGGCGACGACGGC
AACGCCCTGAGCCTGGTACACAGCGCGCGCCACAGCCTGGGCGAGCTTATCAGCTACGACGCGCGCTTTGCCCCGCTGCT
GGAGATGCTGGAGGAGGCGGCGATCCAGATCGACGAAGCCGGCAACGAGCTACGCCACTACGGCGATAGCATTGAGATGG
ATCCCGCCCGCCTGCAGCAGCTGGAGCAGCGCCTGTCGCGCCAGATCGCGCTGGCGCGCAAGCATCAGGTGGCGCCGGAG
CAGCTGCCGCAGCTTCATCAGCAGCTGCTGGAAGAACTGCACGCGCTGGATCGTCAGCAGGATGATGAAGCCCAGCTTGA
GGACACCGTGCGCCAGCACCATCAGCAGGCGCTCAGCCTGGCACAGCGCCTGCACCAGCAGCGCAGCGCCTGTGCTGCAG
AGCTGTGCGGCCAGATCAGCGCCCGCATGCAGGAGCTGGCCATGCCCCACGGCAGATTTGCCATCGACGTTACCTTTACT
CCCGATGCGCTGACCGTCGACGGCGCCGATCGCATCGAATTCCGTGTCACCACCAACCCTGGCCAGCCGCTGCAACCGCT
GGGCAAAGTAGCCTCCGGCGGTGAACTATCGCGCATCGCGCTGGCCATTCAGGTGATCACTGCCCAGAAGATGGATACCC
CTGCGCTGATCTTTGATGAAGTGGACGTCGGCATCAGCGGAGCGACCGCCGCCATCGTCGGGCGCCTGCTACGCCAGCTG
GGTGAATCGACCCAAGTGATGTGTGTGACCCATCTGCCGCAGGTGGCCGGCTATGGGCACCAGCACTACTACGTCAGCAA
AGAGACCGACGGCGAAGAGACCGAAACCCGCATGCGGGCACTGAATAAAAAGGCGCGGCTGCAGGAGCTGGCGCGTCTGC
TGGGCGGCAGTGAGGTCACCCGTAACACCCTGGCTAACGCCCGCGAACTGCTGACCGCCTGA

Upstream 100 bases:

>100_bases
GCGCGGCGCGCAAATATTTGCGCCGGGCACTTTACTGGATAAAAAACCAGTTTATACTGGCATTAAATACAGTAGTGTGA
TTCCGTACAGGGGAATACCC

Downstream 100 bases:

>100_bases
GAACCGCCGACGGTGCGGGAAAAACGCATAATCCGGGAACCAATTCCCCGCGCCGTTGCCTATACTCCCGTCGGCGTGGT
AATCTCGACGCCCAGAAGAT

Product: recombination and repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MLTQLTVANFAIVRELEVDFQRGMTAITGETGAGKSIAIDALTLCLGGRSEAAMVRMNMPRADICARFSLADTPSARAWL
ESNQLDDSNECLLRRVISADGRSRGFINGTAVPLSQLRDLGQLLIQIHGQHAHQLLLKPEHQRHLLDAYGQQHTLLHEMR
AAYRQWHHSVRLLADHRRQISDREARRELLQYQLKELNEFAPQPGEYEQIDEEYKRQANSGQLLSLSQQILAALCDGDDG
NALSLVHSARHSLGELISYDARFAPLLEMLEEAAIQIDEAGNELRHYGDSIEMDPARLQQLEQRLSRQIALARKHQVAPE
QLPQLHQQLLEELHALDRQQDDEAQLEDTVRQHHQQALSLAQRLHQQRSACAAELCGQISARMQELAMPHGRFAIDVTFT
PDALTVDGADRIEFRVTTNPGQPLQPLGKVASGGELSRIALAIQVITAQKMDTPALIFDEVDVGISGATAAIVGRLLRQL
GESTQVMCVTHLPQVAGYGHQHYYVSKETDGEETETRMRALNKKARLQELARLLGGSEVTRNTLANARELLTA

Sequences:

>Translated_553_residues
MLTQLTVANFAIVRELEVDFQRGMTAITGETGAGKSIAIDALTLCLGGRSEAAMVRMNMPRADICARFSLADTPSARAWL
ESNQLDDSNECLLRRVISADGRSRGFINGTAVPLSQLRDLGQLLIQIHGQHAHQLLLKPEHQRHLLDAYGQQHTLLHEMR
AAYRQWHHSVRLLADHRRQISDREARRELLQYQLKELNEFAPQPGEYEQIDEEYKRQANSGQLLSLSQQILAALCDGDDG
NALSLVHSARHSLGELISYDARFAPLLEMLEEAAIQIDEAGNELRHYGDSIEMDPARLQQLEQRLSRQIALARKHQVAPE
QLPQLHQQLLEELHALDRQQDDEAQLEDTVRQHHQQALSLAQRLHQQRSACAAELCGQISARMQELAMPHGRFAIDVTFT
PDALTVDGADRIEFRVTTNPGQPLQPLGKVASGGELSRIALAIQVITAQKMDTPALIFDEVDVGISGATAAIVGRLLRQL
GESTQVMCVTHLPQVAGYGHQHYYVSKETDGEETETRMRALNKKARLQELARLLGGSEVTRNTLANARELLTA
>Mature_553_residues
MLTQLTVANFAIVRELEVDFQRGMTAITGETGAGKSIAIDALTLCLGGRSEAAMVRMNMPRADICARFSLADTPSARAWL
ESNQLDDSNECLLRRVISADGRSRGFINGTAVPLSQLRDLGQLLIQIHGQHAHQLLLKPEHQRHLLDAYGQQHTLLHEMR
AAYRQWHHSVRLLADHRRQISDREARRELLQYQLKELNEFAPQPGEYEQIDEEYKRQANSGQLLSLSQQILAALCDGDDG
NALSLVHSARHSLGELISYDARFAPLLEMLEEAAIQIDEAGNELRHYGDSIEMDPARLQQLEQRLSRQIALARKHQVAPE
QLPQLHQQLLEELHALDRQQDDEAQLEDTVRQHHQQALSLAQRLHQQRSACAAELCGQISARMQELAMPHGRFAIDVTFT
PDALTVDGADRIEFRVTTNPGQPLQPLGKVASGGELSRIALAIQVITAQKMDTPALIFDEVDVGISGATAAIVGRLLRQL
GESTQVMCVTHLPQVAGYGHQHYYVSKETDGEETETRMRALNKKARLQELARLLGGSEVTRNTLANARELLTA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=553, Percent_Identity=70.8860759493671, Blast_Score=789, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61654; Mature: 61654

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQLTVANFAIVRELEVDFQRGMTAITGETGAGKSIAIDALTLCLGGRSEAAMVRMNMP
CCCEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC
RADICARFSLADTPSARAWLESNQLDDSNECLLRRVISADGRSRGFINGTAVPLSQLRDL
HHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
GQLLIQIHGQHAHQLLLKPEHQRHLLDAYGQQHTLLHEMRAAYRQWHHSVRLLADHRRQI
HHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDREARRELLQYQLKELNEFAPQPGEYEQIDEEYKRQANSGQLLSLSQQILAALCDGDDG
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
NALSLVHSARHSLGELISYDARFAPLLEMLEEAAIQIDEAGNELRHYGDSIEMDPARLQQ
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHH
LEQRLSRQIALARKHQVAPEQLPQLHQQLLEELHALDRQQDDEAQLEDTVRQHHQQALSL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AQRLHQQRSACAAELCGQISARMQELAMPHGRFAIDVTFTPDALTVDGADRIEFRVTTNP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCEEEEEEECCC
GQPLQPLGKVASGGELSRIALAIQVITAQKMDTPALIFDEVDVGISGATAAIVGRLLRQL
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
GESTQVMCVTHLPQVAGYGHQHYYVSKETDGEETETRMRALNKKARLQELARLLGGSEVT
CCCCEEEEEECCHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RNTLANARELLTA
HHHHHHHHHHHCC
>Mature Secondary Structure
MLTQLTVANFAIVRELEVDFQRGMTAITGETGAGKSIAIDALTLCLGGRSEAAMVRMNMP
CCCEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCC
RADICARFSLADTPSARAWLESNQLDDSNECLLRRVISADGRSRGFINGTAVPLSQLRDL
HHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
GQLLIQIHGQHAHQLLLKPEHQRHLLDAYGQQHTLLHEMRAAYRQWHHSVRLLADHRRQI
HHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDREARRELLQYQLKELNEFAPQPGEYEQIDEEYKRQANSGQLLSLSQQILAALCDGDDG
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
NALSLVHSARHSLGELISYDARFAPLLEMLEEAAIQIDEAGNELRHYGDSIEMDPARLQQ
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHH
LEQRLSRQIALARKHQVAPEQLPQLHQQLLEELHALDRQQDDEAQLEDTVRQHHQQALSL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AQRLHQQRSACAAELCGQISARMQELAMPHGRFAIDVTFTPDALTVDGADRIEFRVTTNP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCEEEEEEECCC
GQPLQPLGKVASGGELSRIALAIQVITAQKMDTPALIFDEVDVGISGATAAIVGRLLRQL
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
GESTQVMCVTHLPQVAGYGHQHYYVSKETDGEETETRMRALNKKARLQELARLLGGSEVT
CCCCEEEEEECCHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
RNTLANARELLTA
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3037486; 9205837; 9278503 [H]