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The map label for this gene is emtA [H]

Identifier: 238920827

GI number: 238920827

Start: 2840865

End: 2841473

Strand: Direct

Name: emtA [H]

Synonym: NT01EI_2953

Alternate gene names: 238920827

Gene position: 2840865-2841473 (Clockwise)

Preceding gene: 238920826

Following gene: 238920836

Centisome position: 74.52

GC content: 61.25

Gene sequence:

>609_bases
ATGACTCAGACCTCACAGCGCACATATTTTCTTTGCGGCAGCCTGCTATTGCTGCTGATGGCCGGCTGCTCCAGCCACCA
CCGCCCGACAGCCAGCTATAATTCCCATGCCTATGACGGCATCATCTACGCGGCAGCGGCCCAGTACAATCTGGATCCCA
AGCTTATCAAGGCGATAATCCAGGTCGAATCCAGCTATAATCCCAGCGCCGTCAGCCCCTCCAACGCCATCGGCCTGATG
CAGATCAAGGCGGACGGCGCCGGCTGCGACGCCTATCGCTACCAGGGCAGGCACGGCTGTCCGGACAGCGACGACCTGTA
CGATCCAGCCACCAATATCCGACTGGGCGCTGCCTACCTCAGCGCGCTGCAAAACCAGCAGCTCTACTGGATAAACGATC
CCCTGACCCGCCGTTATGCCACCGAGGTGGCCTACGTCAACGGTGCCGGAGCCCTGCTGCGCACCTTCTCAGCCAACCGT
CAGACCGCCATCGCCATGATCAACAGCCTGACGCCGGCAGCCTTTCACTGGCACGTCCGCAGCCATCATCCGGCGCCACA
GGCGCCGCGCTACATGCTCAAGGTCGAAACCGCCTATAACCACCTGTAG

Upstream 100 bases:

>100_bases
CACGCTGTGCGCGGGCTCTTATCGGCCGGCGCCAGCGACAAACGGCCTGACCGGCGGGCGTCGACCCCGCATGACGCGTA
CAATTGCGGAACACAGCCTC

Downstream 100 bases:

>100_bases
GAGGCTCAGCCCCCATTGCATAGCGGTACGTTTTTACGGCAAAACGGGCACCAGGTATGACAGCGGCTCAGCACGCTGTG
TAGCCGGGTGCGGATCCGCT

Product: endotype membrane-bound lytic murein transglycosylase A

Products: NA

Alternate protein names: Peptidoglycan lytic endotransglycosylase [H]

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTQTSQRTYFLCGSLLLLLMAGCSSHHRPTASYNSHAYDGIIYAAAAQYNLDPKLIKAIIQVESSYNPSAVSPSNAIGLM
QIKADGAGCDAYRYQGRHGCPDSDDLYDPATNIRLGAAYLSALQNQQLYWINDPLTRRYATEVAYVNGAGALLRTFSANR
QTAIAMINSLTPAAFHWHVRSHHPAPQAPRYMLKVETAYNHL

Sequences:

>Translated_202_residues
MTQTSQRTYFLCGSLLLLLMAGCSSHHRPTASYNSHAYDGIIYAAAAQYNLDPKLIKAIIQVESSYNPSAVSPSNAIGLM
QIKADGAGCDAYRYQGRHGCPDSDDLYDPATNIRLGAAYLSALQNQQLYWINDPLTRRYATEVAYVNGAGALLRTFSANR
QTAIAMINSLTPAAFHWHVRSHHPAPQAPRYMLKVETAYNHL
>Mature_201_residues
TQTSQRTYFLCGSLLLLLMAGCSSHHRPTASYNSHAYDGIIYAAAAQYNLDPKLIKAIIQVESSYNPSAVSPSNAIGLMQ
IKADGAGCDAYRYQGRHGCPDSDDLYDPATNIRLGAAYLSALQNQQLYWINDPLTRRYATEVAYVNGAGALLRTFSANRQ
TAIAMINSLTPAAFHWHVRSHHPAPQAPRYMLKVETAYNHL

Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. Preferentially cleaves at a distance of more than two disaccharide units from the ends of the glycan chain [H]

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase slt family [H]

Homologues:

Organism=Escherichia coli, GI87081855, Length=197, Percent_Identity=47.7157360406091, Blast_Score=171, Evalue=4e-44,
Organism=Escherichia coli, GI87082191, Length=164, Percent_Identity=45.1219512195122, Blast_Score=149, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258
- InterPro:   IPR000189 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: 3.2.1.- [C]

Molecular weight: Translated: 22266; Mature: 22135

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00922 TRANSGLYCOSYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTSQRTYFLCGSLLLLLMAGCSSHHRPTASYNSHAYDGIIYAAAAQYNLDPKLIKAII
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
QVESSYNPSAVSPSNAIGLMQIKADGAGCDAYRYQGRHGCPDSDDLYDPATNIRLGAAYL
HHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEHHHHHH
SALQNQQLYWINDPLTRRYATEVAYVNGAGALLRTFSANRQTAIAMINSLTPAAFHWHVR
HHHCCCCEEEECCCHHHHHHHHEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEC
SHHPAPQAPRYMLKVETAYNHL
CCCCCCCCCEEEEEEEHHHCCC
>Mature Secondary Structure 
TQTSQRTYFLCGSLLLLLMAGCSSHHRPTASYNSHAYDGIIYAAAAQYNLDPKLIKAII
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
QVESSYNPSAVSPSNAIGLMQIKADGAGCDAYRYQGRHGCPDSDDLYDPATNIRLGAAYL
HHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEHHHHHH
SALQNQQLYWINDPLTRRYATEVAYVNGAGALLRTFSANRQTAIAMINSLTPAAFHWHVR
HHHCCCCEEEECCCHHHHHHHHEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEC
SHHPAPQAPRYMLKVETAYNHL
CCCCCCCCCEEEEEEEHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA